Lory000442.1
Basic Information
- Insect
- Latheticus oryzae
- Gene Symbol
- JARID2
- Assembly
- GCA_030157265.1
- Location
- CM058048.1:4741787-4747632[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-23 2.2e-19 69.6 0.0 6 89 1319 1400 1315 1400 0.93
Sequence Information
- Coding Sequence
- ATGGTAATAAGCCGAACCGAGATGAAAAGAAAACGCAGAGACGAATGTTCATCACCTTTACTTGATGATAGCCCAAAGaggACCAAAGTACATGCTCAGCGTAAATTTGCACAAGGTTCTAATGTAAATAGTCCAGTTATAACTCCAGtcaaagaaatagaaaaacaagaaattgaTGTTCTCCCTGAACCTGTAGAGCTTTTGCCTATAAAACGCCCTAATACTGAAGATTTCCTCACGTTTTTGTGTTTCCGTGGAACGCCAATTTTACCACCTagcttgaattttttcaacactgCTTCTATAGTTGATACCAATGGTCAAGTCCATGAGATTAAAAGTGAATCTCCTAAGAATGGCCCAATCGATACATCTGCTATCACTAAAAGTGGATCTGGATCTTCAGAGAGACCATTTATAGCATTTGGTGTTCGAAAACGTGCAGATCCTATTGTAATCAGCAGACAAATggataaaaaaagaagacatgCTCTTGCTTTGCAAGCTTTGAGGAGGAAATATCAAGAGCAAAGAATGGCTAAAATTAGAGCAGTCACTATTAGCAAATTGTCTGAGAAAGTTTCGAGTAAAACACTAGTTAGATCGAATTCTGtatcaaaaagtgaaaatggaAGTAAGAAAAGCACTccaattcaaaaaacaaaaactgttgaaagttctaaagaaattaaagtggaaacacGCTCCATGAAAGCTGGATTAAGACCGCAAattaagcaaaaaatgtgtttgAGAAGTTTCAGGGGGAGGTTTGTCCAAAAAGAGTTGCAGTttagaaatgttaaaaaaagagctttgaatgttaaaaaagttaataaatttgcTATAAAGACAACGGAAAAAGATAACCAAAGTAGTGGATCATCTGATTACTCTTCTGAAGATGAGAAACTCTCAAAGCTTTCCCCGAAAATAAGTATACCAAAAATAGCTAAAAAGTCAGCGCCTGGACCTAAAAAACCAGCAGAAATTAATTTCAGAATCACGCGTTCTAACAAATTCTTAAACAACAAAATGGTATCAAGAAGACAACAAATGAAGCAGCAGATGTTGATGTCCACGCCTAAAACAATTGTTAAACCAAGAACACTAAGATCTCATACAGCTCAAAAAGGCaggattttatttgaaactaaacaaacaattctgaaaaataaaaatcagactaaggaggttaaaaaagttaaaacaaacAATGTAAAACCTGAttctaaagaaaaagaagaaacaaatgtaaaaaaagagGCAAAGGATAGTGTTAAAAAAGTAACAACAAAATCTGTGGATCCATCACCTAATCCACttccaaataaaactaaaaacgaGAAGCAATCAAACGTGAAAAAAGAAGttgacttgaaaaaaaataaaatagaaactaaaacaaataaagtggaagttaaaaaagaaattgtaaAGAAGAAATTGTCAATAGTAACGAAGAAAAATATCGCTAAACCAGATAAAAAggaaattactaaaaaagAACCGATAAAAGTAGCAGATGATTCCGATAAAAAATCAGCGCTTAAAACAGATCAAAAAGACACTGAAGTAAAAACTTCTCAAAGACCTACTCGCAAAACTAAAGAAGCCGCTGCTATTTACATGGAAATCCTAAGTCATAAATTAGTTAATGAAAGCAGAATCGACGATGATAATGTCTCAATAGACAGctttccggaacttcccaatgttaaaaaaacagaACAAAGAGAAAATGAACTAAAAGCGAAAGCTAGATCCACGAAAACTTCTGAAAGTGAATCGTGCGGTGAAACCAAAAAGAcattaaaaactaaagaaaGTGAAGTTACAGACAGCAAGGTTTTACGATcaagtgataagaaaaaagttattccatcaaaacaaacagaaaataaaaaaagtgttgTTAAGAAAGAGACTAATGAATGTAAGGCGAAGAAGATAGTGAAAGAGGAAACTTGCGATAGAAAGACTAGATCAGCGAATCAGGAAAAATCTGATAAAAGTTTTGGATCACCTTTAGTTAAAACAGAAGATGAGTCTAAAGAcaataaaaaggttaaaatGGAGAAAAAAGAGCCTccatataaacaaaaatgtgatAGTAATTCTGATTCGGATGTTTCGGAAGAAAagaataatgataaaaaatcgaaTGATGATTTACCAAGGCGACAGACAAGGAATTCGTCACATAATATTAGACATGTTGAAAGTGACGATTCTGATGAATCCTTTCATGCTGATATCAAGATTCCAAGGAAGAAGCAAATCACTAgaagtaaagtttcaaaatcttttgaaagCGACAATGAAGATTCAGTCAGTTCTTTTAAAAAGTCGCTAAGAACACATGCGAAAAGTTACAAAGAATCTAGTTCTAGCGATTCCGATCGGTCTACTACTTCTGATGTGGAggtaaaaaatgtgaaatcaaagagtaaaaaatttacaaaaactagATGCCAGAAAAAAGATGAACAAAGTTTTAGTGATTCAGACGAAGAACCGCTTTCTAAGTTGACgaagaataataaagaaaCGGTGAAAGAGCAagatgataagaaaaataaatcatatgttgaaagcaaattaaaaaaagataaatctGAAAGTGAGCAGAAAGAAGTATTTGTGAAACCAAAAAGGGAATGTGCTAAAAGACCACAGAATTATCTGCCAATGTTTTCATCGTCTGATGAAGAAGATTtctattttcaagattttaaaGACGAAGATTGTAAACCAAAACCAAAAGATCCGGTTAATAGTAATCCCCCGACTTCTGATTTATCTTTCAAGGATATTGGCAGAAGATTTGGTAAAGGAAAAGTGAACATGTCAACTgaacaaatagaaaaatggTTAAAAGATTCAGCGATGGCTGGAAGTAGTATCAAAAGTGAAGATGATCCAATGTTTAAATTTGGAGAAAAAATTCCTACAGAAACATCATTTAGTATAGCGTATTCTATTGAtacaaaaaaactaagaaCTTTGTTGATTGATaaacaagaaatttatttagaaaagaaagaaatcTCACCAAAAGCTAGTTTTGGTGAAGAAGCGAATAGACAAATCAGTCCAATGAAATATCCAGCACCTGatcgaaaattaattttccgGAATAAGGATAAAGTGAATGTGGCTTTAAACGCTAAAGCTTTTTCTGTAAGCAATGAAAATAGTGTTTATGCTTTTGGTGAAGAAGCTGAAGACGTTATGAGAACGCCGTTTAGGAGACCACCAAGGAGACCGTCTAGTACTGCTACTTCCAAGTCAGAAGATGATGTTTCAAAGAGTGAAGATTTGCCAAAGTCATTATCTGGTCAATTCAGAAAACCAAATCTTATGAAACAAGATTCAATAAAGTCAAAAGATTCTGAAACTCCTGAAGAAAAACcacaaaaagaagaagaaaatgcTTTTTATGTCCCCCAATCAACAGCaagtaagaaaaatatcacaCCACCAGCAACACCcaaagttgataaaaaacaaatccCTCCAACGACTATGGTTCCACCATcgataaatataaaacttcCTCCAAAACCAAGaacttcagattctttagatgaTTCAAAATACAAAGTACCAAGTTCTCCAAGCGCTAGTTCTTCATCCAGTGCTAAGTTATACAAAAGACAAACTAAACTAAGAGCATCTGAAGTTCTTCCAGTGAAACTACCCGATTTTCCAGTTGGAGGATGTGCGCAATTGGTTGAAGCACCAACTTTTCATCCTTCGGAAAAAGAATTTCAAGATCCTTTGgagtattttgaaaaaattcgacCAAAAGCTGAACAATTTGGCATTTGTCGAATAATTCCACCGTCGACTTTCAAGCCAGAGTGTAAAGTTACAGACGATATGAGATTCACTGCGTATAATCAATATGTGCATAAAATGTTGCATCGATGGGGACCTAACTTTAAGGAGTTGATGGCTATTAAGAAATATTTGTCGACGCAGAATATTAGTCTGACGCATCCACCATGGATTGGAGGTATGGAAATCGACCTTCCGCGTCTGTACCAAACTGTACAATCATTAGGAGGTTTAAAAGAAGTTATCGAAAAGAAAAAGTGGTCCAAAGTTTCAGATGCTATGAAAATCCCGAAATCAGCACAAGATAGAGTCACAAAGTTGGATGATATTTATTGCAAATATTTGCTACCCTATGATACATTATCTCCTGgtGAAAGAGAGAAATTGTTTGATGAAGTAGAAACAGAATGGGCAAAACGCGAATCCAAATCCTTGCTTAAAGCCCAAGGAAATACCGATAACAATGAAAGTGATACAGAATCAGAATCCGACGATGAAGCTGAAGAATGTATTGTTAAAGGAAGAAGTATGGCTTTGAATGCGTTTTATAGAATAGCCAGGAATACAATGAGTATGTGGTTCAAAACTACTGAACCTCCAGCTGAAGAAGTTGAGCAAGAATTCTGGAAACATGTAACATCAAAACAAAACCATATTTGTGTCCATTCTGGATCTATAGATTCTGGACATTGGGGCTATGGTTTTGCTGTTTCTAAAAATAGCCCATTCGCTCGCCATGCATGGAATCTCAAAGTTTTAACTAATAACAGTGGATCTGTGTTAAGATCCATGGGTCCTATAATGGGTGTTACAGTCCCGACATTACACGTCGGTATGGTATTCAGTTCTTGCTGTTGGTACAGAGATCCGCATAGCTTACCCTGGATTGAATATTTACACACAGGAGGGAGTAAAATCTGGTATGGAATACCCAATTCAACAAGTGGCGCTTTCCACTCAACTTTGAAAGCAATAGTACCAAATTATTGCAGAAACAAAAGTTTATGGTTACCATCTGATACTGTAATGGTACCTCCGAATTTATTAGTTGAACATGGAGTTTCTTTATCGAGAATTGTCCAAGAACCTGGACAATTTATAATAGTTTTTCCTAAAGCATTTACTTCTAGTTTAAGCACAGGCTATGTGGTATCAGAAAGTGTTTATTTCGCTCCGCCGTATTGGTTAAAAACTGGTAGAATTGTTTTTAACGAATTGCGAAACAGCTGCGAATCGTCAATGTTCTCTTTTGATAGGTTGTTATTGAGTATTGTGAATGATCCGCGATCGAGTGTTGATGTTTTAAAACAGATTATACCAATTGTGCAAGAACTCTgtgataaagaaaaattagcaagagaaaaaattaaaagtttggGAGTTAATGCTACTGAAAAGTTACCTTTACCAGATACGCCTCAAAtgagaaaaaagaagaagatgCAAAGTGAAGATGGAGAGTATGAGTGTGAAATTTGTAGAATGAATCTTTTCGTATCAATGgTTACTGAATCGCAAGAAGACATAATATATTGCCTAGAACATGCTGCTGAAGAACTTGAGAAAAAGAAGATCCAAAGCAAACATTGTAAATTAACATATACTTATGACGACCAAGAATTGAATGGAttaatcgaaaaaattaactcTGCGATTGCAAGTAAATTGCAGAAGAAAGTACCTAGTAAATATACAGGGATGCCGACTCTTTTAACTAAGTGA
- Protein Sequence
- MVISRTEMKRKRRDECSSPLLDDSPKRTKVHAQRKFAQGSNVNSPVITPVKEIEKQEIDVLPEPVELLPIKRPNTEDFLTFLCFRGTPILPPSLNFFNTASIVDTNGQVHEIKSESPKNGPIDTSAITKSGSGSSERPFIAFGVRKRADPIVISRQMDKKRRHALALQALRRKYQEQRMAKIRAVTISKLSEKVSSKTLVRSNSVSKSENGSKKSTPIQKTKTVESSKEIKVETRSMKAGLRPQIKQKMCLRSFRGRFVQKELQFRNVKKRALNVKKVNKFAIKTTEKDNQSSGSSDYSSEDEKLSKLSPKISIPKIAKKSAPGPKKPAEINFRITRSNKFLNNKMVSRRQQMKQQMLMSTPKTIVKPRTLRSHTAQKGRILFETKQTILKNKNQTKEVKKVKTNNVKPDSKEKEETNVKKEAKDSVKKVTTKSVDPSPNPLPNKTKNEKQSNVKKEVDLKKNKIETKTNKVEVKKEIVKKKLSIVTKKNIAKPDKKEITKKEPIKVADDSDKKSALKTDQKDTEVKTSQRPTRKTKEAAAIYMEILSHKLVNESRIDDDNVSIDSFPELPNVKKTEQRENELKAKARSTKTSESESCGETKKTLKTKESEVTDSKVLRSSDKKKVIPSKQTENKKSVVKKETNECKAKKIVKEETCDRKTRSANQEKSDKSFGSPLVKTEDESKDNKKVKMEKKEPPYKQKCDSNSDSDVSEEKNNDKKSNDDLPRRQTRNSSHNIRHVESDDSDESFHADIKIPRKKQITRSKVSKSFESDNEDSVSSFKKSLRTHAKSYKESSSSDSDRSTTSDVEVKNVKSKSKKFTKTRCQKKDEQSFSDSDEEPLSKLTKNNKETVKEQDDKKNKSYVESKLKKDKSESEQKEVFVKPKRECAKRPQNYLPMFSSSDEEDFYFQDFKDEDCKPKPKDPVNSNPPTSDLSFKDIGRRFGKGKVNMSTEQIEKWLKDSAMAGSSIKSEDDPMFKFGEKIPTETSFSIAYSIDTKKLRTLLIDKQEIYLEKKEISPKASFGEEANRQISPMKYPAPDRKLIFRNKDKVNVALNAKAFSVSNENSVYAFGEEAEDVMRTPFRRPPRRPSSTATSKSEDDVSKSEDLPKSLSGQFRKPNLMKQDSIKSKDSETPEEKPQKEEENAFYVPQSTASKKNITPPATPKVDKKQIPPTTMVPPSINIKLPPKPRTSDSLDDSKYKVPSSPSASSSSSAKLYKRQTKLRASEVLPVKLPDFPVGGCAQLVEAPTFHPSEKEFQDPLEYFEKIRPKAEQFGICRIIPPSTFKPECKVTDDMRFTAYNQYVHKMLHRWGPNFKELMAIKKYLSTQNISLTHPPWIGGMEIDLPRLYQTVQSLGGLKEVIEKKKWSKVSDAMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPGEREKLFDEVETEWAKRESKSLLKAQGNTDNNESDTESESDDEAEECIVKGRSMALNAFYRIARNTMSMWFKTTEPPAEEVEQEFWKHVTSKQNHICVHSGSIDSGHWGYGFAVSKNSPFARHAWNLKVLTNNSGSVLRSMGPIMGVTVPTLHVGMVFSSCCWYRDPHSLPWIEYLHTGGSKIWYGIPNSTSGAFHSTLKAIVPNYCRNKSLWLPSDTVMVPPNLLVEHGVSLSRIVQEPGQFIIVFPKAFTSSLSTGYVVSESVYFAPPYWLKTGRIVFNELRNSCESSMFSFDRLLLSIVNDPRSSVDVLKQIIPIVQELCDKEKLAREKIKSLGVNATEKLPLPDTPQMRKKKKMQSEDGEYECEICRMNLFVSMVTESQEDIIYCLEHAAEELEKKKIQSKHCKLTYTYDDQELNGLIEKINSAIASKLQKKVPSKYTGMPTLLTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -