Lory009049.1
Basic Information
- Insect
- Latheticus oryzae
- Gene Symbol
- ARID5B
- Assembly
- GCA_030157265.1
- Location
- CM058053.1:3456368-3468080[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.54 1.3e+03 -0.2 0.0 37 52 137 152 134 174 0.85 2 2 5.3e-26 1.3e-22 79.9 0.0 2 89 246 331 245 331 0.95
Sequence Information
- Coding Sequence
- atgaaatttttgagtcATTGTCAAGCAGATGATAAACTAGGTTACTGTCGACATGTAAAAGAGGCTTTGGCTAGAGATgatgAAGTTCTTGCAATATCGGAAAAAGTGGTTCTACGTGTAGAAGATTTGATAACTTGGATAACAGTAGATGCTGAATGGACATGGGGTAGATTagcaaaatatgaaaaagatGTGAAAGATCCACCGAAAAGTGAAGATGGTAAAAATGGGATAGGATCATTAACTGAAagttctttagatttttcggatgttgaaaaagaaagaaaagcATCTGattgcTATTCGGATAATGGAGGTCCTCCAGTAGTAATATTGAGTTATCCACGTTATTGTCGATATCGTGCCATGATGCGTCGCCTCGAAGGTGTAGAAAATGAATACCTCAAATATAAAATAGTAAATGCATTAGGTGGATTTACAacttatacaaaaaatacacGTGTACTTTTTTGTAAAGATACATTTGATTATCCAGAATTAGAAGGACATGAATTATTGTGCAATCATTTGGCACCAAAATTAAAAGGAAGACCTCGAGGAAAACGGAAAAAACGAAGTGTTTCTCCTGGATCGGAAAGTAATGAATCGGAATCGTCAGTATCTAATGTGTTCAATACATCAAAAGAGAAAATTAACactgaaaatgttaaaaatggtCTAAGATGCGATAATACACAATTAAGACGCAGTACTCGAGCgactgaaaataatgaaagtaAAGAATTTATGAAAGATTTGactatttttatgaaaactaaTTATTCGCCAATTGGGAAAATACCATCGTTGGGTTATAAAGAATtggatttatatttgttttatacAAAAGTGCAGAAATTGGGAGGTTATGATGTTGTGACTACGAATCGATTATGGAAATCGATTTTTGATGATATGGGAGGCCATGCTAATAGCACTAGTGCTGCTACTGTCATTCGGAGGCATTACGAAAgattcCTTCTACCTTATGAGCGTCATGTCAAAGGCGAAGAATACAAACCATTGCCAATATCAGAAAGACGTCGACTGAAAAGTAAAACCGGAAGTAGTACAAGTGATGCTGAAACAAGTGAAAGTACATCAAGAAGTGGTAATAGTACACCAGTACTGAATAGTTCAACACCTGTCACTCCAACAACGCCTACTGAAAATAAAgAATTTAATGTACAAGCAAAGACATCATCATCTCTACGCAGTGTTCGTGTAAAATCGGATCGTCAAAAAGACAAACaaacaataattcaaaataataataatgaaccAGAAGTAAAAATCGAAGATACAACTCATGAAGTTGTAGCAATAAAAGCTGAAGAATTCGTACCAGATAAAGATATTGAACCATTAACATCAGCTGTAGCACCAAAAGCTCAAAATCCAAATCCTGAAAAATCTCATACTTTAGAAGGCAAGGAAAATATaccaataataaaaacagGCGATACTCCTAGTAAAAGTAAAAGTCCGGAAGTAATCGAGGTGCCAtataatacaaaaacaaaaagtccGGAAATAATTGATTTAGAATCAACGCCAACTTTTCAAGAAgttaagaaaagaaaattggatattttaaaagaaggAGGCTTAGAAGTAACACCTGTACGAACAGTAACAAAAGAAATACGACCATCAGTTATACAACCAGTAccaatgaaaaatgaaatgcCACCACCTGTTAGTGTAGTAccaactacaaaaaaaataattccacAAAATATACCTAaaacttataattataataatggaCCACCGAAAGTATTACAATCAAAATCGATTTATTCGTATTCGGAGAAAACAGTTTATGGCAATCCAAAAGATTATATAAATCCAGTACATACTCCGAAATTTGTTGGAAGTAGACAACATCAAGgagatattttagatttaacaGTAACAAGTCCACAAAAACCTGTTGtggaaataatgaaaataccAACACCTAAAGTACCATATAAAATGCCCACGAATAATGTGTTAGATGGGAGACGGTtgggttcaaatttagagatAACTTTAGTTGGGTCTAATCGACAAGCCGCAGCGCCACCTACACCCAAATATAATTTACCACCACCGACTAATTACCAACGATTTACAACACACAAAAGAATAGCGTCTGAACATCATCTCAACCATAAAATACCAAGAattgatgaaaataaatataatagtAAAATACAAATACCTACATTACCGACTCCAAGTAAATCAACAATGGATATAACAATACCACACCATACAGCCAAAATTCCCCAAATACCAACTCCACATCCGCAATTTTCGTATTTATCGCATTTATACGAAAGTAGTAAAAATGTGGCTCCATATTTGCCCATGATGGATCCAATTTATTATACAGCAGCTATGCAAAGTTTATATGGTCCATTAGGTGCCGCCCATCCTCCTCCAGTTCCTCCATTACCATCAACTgaacaattgaaattttatagtgATTTAATGGCACATACGTCACGTTTAAACTTTCATTTTCCAATTGGATCCGATGGAAATCCTTCCATGttgaataataatagtaatagtttgaaaaaaccATAA
- Protein Sequence
- MKFLSHCQADDKLGYCRHVKEALARDDEVLAISEKVVLRVEDLITWITVDAEWTWGRLAKYEKDVKDPPKSEDGKNGIGSLTESSLDFSDVEKERKASDCYSDNGGPPVVILSYPRYCRYRAMMRRLEGVENEYLKYKIVNALGGFTTYTKNTRVLFCKDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSVSNVFNTSKEKINTENVKNGLRCDNTQLRRSTRATENNESKEFMKDLTIFMKTNYSPIGKIPSLGYKELDLYLFYTKVQKLGGYDVVTTNRLWKSIFDDMGGHANSTSAATVIRRHYERFLLPYERHVKGEEYKPLPISERRRLKSKTGSSTSDAETSESTSRSGNSTPVLNSSTPVTPTTPTENKEFNVQAKTSSSLRSVRVKSDRQKDKQTIIQNNNNEPEVKIEDTTHEVVAIKAEEFVPDKDIEPLTSAVAPKAQNPNPEKSHTLEGKENIPIIKTGDTPSKSKSPEVIEVPYNTKTKSPEIIDLESTPTFQEVKKRKLDILKEGGLEVTPVRTVTKEIRPSVIQPVPMKNEMPPPVSVVPTTKKIIPQNIPKTYNYNNGPPKVLQSKSIYSYSEKTVYGNPKDYINPVHTPKFVGSRQHQGDILDLTVTSPQKPVVEIMKIPTPKVPYKMPTNNVLDGRRLGSNLEITLVGSNRQAAAPPTPKYNLPPPTNYQRFTTHKRIASEHHLNHKIPRIDENKYNSKIQIPTLPTPSKSTMDITIPHHTAKIPQIPTPHPQFSYLSHLYESSKNVAPYLPMMDPIYYTAAMQSLYGPLGAAHPPPVPPLPSTEQLKFYSDLMAHTSRLNFHFPIGSDGNPSMLNNNSNSLKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -