Lory004447.1
Basic Information
- Insect
- Latheticus oryzae
- Gene Symbol
- Xbp1
- Assembly
- GCA_030157265.1
- Location
- CM058050.1:6547651-6549066[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-13 1.2e-10 41.1 9.2 2 52 41 91 41 91 0.95 2 2 6.6e-05 0.047 13.6 0.8 26 60 79 113 78 117 0.88
Sequence Information
- Coding Sequence
- ATGACAAGTGCAGTTCCGGCTATTTTAAAGTATTTAAGTGATAGTAGTAATTACAATATTGATCAAAATATGGAAACACCTGTTAGAGCTAAGAAACGAAGACTGGACCATCTATCATGGGAAGAAAAACTACAGAGGAAGAAGTTGAAGAATCGCGTGGCCGCACAGACTTCTCGTGACcgcaaaaaagcaaaaatggACCAAATGGAAAAAGCCATCCAAGAGTTGTTCGCAAAAAATGAATCTATTTTAGCCGAATGTGACAGATTACGTGCATCAAATGAAAGATTATCAATGGAGAATGCAGAATTGCGAGCCAGATTATCATCATGTAGTAATTGTTGTATGAATCAGAACCGTTCTGTCGAATATGAGACTGAGAGTGGATCAGCTGAATCCCTCCTTCGGCCGCAAGGAACAGTCACATACTCAGCAGCGGCTCTGAATTATCATCGAACAACAACTATAGCACTGTTGAAGATAATATTGGCTTGCCTTCTTTACCGGACCTCCTTGATGAACTCAACAACGATGTCGACATCTCATCGCTTGAACAACTCACACAAAGTCTCCTTCAAGATATCGCCAGAGACTTGGAGGCTGCTGCTGAAAAGGCAGATATTCAaGAACAAACTAATGGTCAAGAAAACAATCCAGGAGAAGTGGTGGGGTCGTCATCAGAACAACTGGAATCCGATGGAAGTGATCGCTTAA
- Protein Sequence
- MTSAVPAILKYLSDSSNYNIDQNMETPVRAKKRRLDHLSWEEKLQRKKLKNRVAAQTSRDRKKAKMDQMEKAIQELFAKNESILAECDRLRASNERLSMENAELRARLSSCSNCCMNQNRSVEYETESGSAESLLRPQGTVTYSAAALNYHRTTTIALLKIILACLLYRTSLMNSTTMSTSHRLNNSHKVSFKISPETWRLLLKRQIFKNKLMVKKTIQEKWWGRHQNNWNPMEVIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -