Lfle020737.1
Basic Information
- Insect
- Laspeyria flexula
- Gene Symbol
- nfxl1
- Assembly
- GCA_905147015.1
- Location
- LR989971.1:10451377-10453851[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 2.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.01 1.3e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 18 4.4e-07 0.0053 17.2 14.6 3 19 186 202 185 202 0.93 4 18 1.6 1.9e+04 -3.8 0.6 6 10 227 231 226 231 0.78 5 18 1.1e-07 0.0013 19.1 11.5 3 19 239 255 237 255 0.92 6 18 0.2 2.4e+03 -0.9 1.9 5 10 279 284 279 284 0.95 7 18 3.6e-10 4.4e-06 27.0 12.0 1 19 290 308 290 308 0.99 8 18 2.2e-06 0.027 14.9 19.3 3 19 345 361 337 361 0.88 9 18 2 2.4e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 18 2.1e-06 0.026 15.0 18.2 1 18 395 412 395 413 0.97 11 18 8e-09 9.7e-05 22.7 16.9 1 19 422 440 422 440 0.99 12 18 0.0002 2.5 8.6 6.4 9 19 488 498 486 498 0.89 13 18 0.0035 42 4.7 9.7 1 11 508 517 508 518 0.95 14 18 0.29 3.5e+03 -1.4 3.0 14 18 547 551 547 552 0.84 15 18 0.21 2.5e+03 -1.0 0.4 8 12 568 572 567 579 0.79 16 18 9.8e-05 1.2 9.7 4.3 1 11 588 598 588 599 0.97 17 18 8.7e-05 1 9.8 18.7 1 18 628 645 628 646 0.86 18 18 0.00018 2.2 8.8 11.3 1 18 687 705 687 706 0.88
Sequence Information
- Coding Sequence
- ATGGCACGTCGATACAGAGATGCGGCCGCAAAACTACATCAAAATGTTCAAAAACATTTAAAAGAAATGAAGGATCTCTCATCCTCCGAAGACGAAGAGCCTTACGAATCTAGTGTTCTTGATGGGGTCTTCCAAAGCTACCGGAAAGGTGGTGGAGACACTTCTTTGCTAAATCGAACCAAGAACCTTCTTGAAGAAGCCATTAGTGGTCGTACAATAACGTGCCTAATATGCATAGGATCGATCAAAAGGACAGATGCAATATGGACCTGCGATCACTGTTATTCTTATTTTCACCTATCTTGTATTCAAAAATGGTCAAACGACAGTATCAGCTTACGTAGCGAAGAATCTTCGGGCCCCATTGCTGTAATAAAACGGCAAAAAATCGAATGGTGTTGTCCAAAATGTCGACAGTCGTATTCGAAGGAAGAAATACCACGAAAATATCGGTGCTATTGCGGTAAAACTGACGATCCACCTTATCATGCATGGCTCATACCTCATACGTGTGGAGAAGTTTGTGGAAAGAGGCTATCCGGTGGTAGCAACTGTACACATAAATGTTTTCTGTTATGCCATCCAGGTCCTTGCCCTCCGTGTCCACAGACTGTCAATGGCATATGTTATTGTGAAAAAGAACGCAAGCGAGTGAGATGTAGTGCAGCAAAATGGTCATGTGGCCAGGTGTGCAAGAAAACTCTATTGTGCAAGACTCATAAATGTGAAAATGTGTGCCATGAAGGAGATTGCTCTACTTGTAGCTACACTAGCATTCAAAGCTGTCAATGTGGACTTGAAAAAGCCAAAAGGCCCTGCAATGATCCATTTTGGAAATGTGAACAAGTGTGTGACAAATCTTACTCATGTGGTTTCCATAAATGTGAGAAAGTATGTCACTCAGGTGACTGCGGCTCTTGCCCTAATTCTGGTATGTCATCATGTCCTTGTGGGGCAAACCAACGCATTGTCCAATGCCCGGATGTTATGGAAACATGCTTAGGCACATGTGGTAAGAAGCACGATGATTGTGATCACAACTGTCCAGAAAAATGTCATAAAGGCCCATGTCCCCCTTGCCAAGTTTTGATTCAGAAAAAATGTCAGTGTTCTACACATACCCGCTCATTGCCTTGCAGTAAGGAATTTAAGTGTGAGACCAAGTGTAGAGGAATTAGACCATGCGGTAAACATGGATGCGCAAGAAAGTGCTGCAGTGGTAACTGTCCACCATGTGAGAAAATATGTGACAAGCCATTACAATGTGGTAGACATAAATGCACAAACATTTGTCACCATGGACCTTGCTACCCTTGCCCGAGAGAATCTAAAGTGACTTGCAGATGTAAAGAGACATTTGTCACTGTACCCTGTGGAAGAGAGAGACACACAAAACCTCCAAAGTGCACATTGATGTGTAAAATAAAATATAAATGCGGACACATTGAAGAAAATAAGCACTCTTGTCACTTTGGTGACTGTCCACCATGCAAAGCTATTTGTGACAAAGAGTACCCTAAATGTGGTCATCACTGCGAAGCGGTTTGTCACGCAAACGTTGCAGTTGTTTTTAAGCAAGTGGAGAAGCCTGCTACACCATGGGAAGTTCAACCACCTAAGACTAAAATCATGACTTTAGAATGTCCACCGTGCCATACTCCTGTACCAATAGTATGCTTTGGAGAACATGAGACTGATGATCAGCCTTGTCACTCAGCTGCTCGGAGGCCTTGTGGCAGAGAATGTGGACGTCCATTGAAATGCAGTAATCATAAGTGTACCCTGCTTTGCCATCTCCTCAGTCCAGTTCCTGAATATCCAAATGTGCCTTCAATTTGCCGAGAATGTAATAAAGAATGCTTAGTCCCTCGGCCTGAGAAATGCTCTCATAAGTGTCCAAAGCAAAAGTGTCATCCAGGACCGTGTCCACCATGTGAGATATTAGAACGATTGGCATGTCATTGTGGAATAACCAACATTTACTTACGTTGCCGTGAAATATCTATTGCTACAGATGAAATGCTTTCATGTAAGCAGCAATGTCCAAAGAATTTGGCATGTGGTCACTTGTGCCCTAATATCTGTCACCCCGGTATCTGCGATGGTAACAATTGCACTAAGAAAACCAAGATTCACTGTTCTTGTGGTAATCTGAAGAAAGGGATAGCATGTGATGTTGTTCGTAGAGGAGAGGCAAAAATTGATTGCGATGAAACTTGTAAAGCCAAAAAGATAGCAGCTAAACTGGAGAATGAGAAAAAGAAAGAGAGATTGAAGGCTTTAGAAGAAGAGAAAAATAAAAAAGAGTTGGCAGAATATGAATGGAAATTGAGTGGTAGGAAGAAGAAGTATAAGGAGAAGAAGGTAGTTGTTGGTAATGATGATAGAAACATTTTACAAAAATATTGGATACCTATATTATCAGTACTAATTGCTGCAGCTGCAGCTTCTTATTTTCTTATATTCTATGTATGA
- Protein Sequence
- MARRYRDAAAKLHQNVQKHLKEMKDLSSSEDEEPYESSVLDGVFQSYRKGGGDTSLLNRTKNLLEEAISGRTITCLICIGSIKRTDAIWTCDHCYSYFHLSCIQKWSNDSISLRSEESSGPIAVIKRQKIEWCCPKCRQSYSKEEIPRKYRCYCGKTDDPPYHAWLIPHTCGEVCGKRLSGGSNCTHKCFLLCHPGPCPPCPQTVNGICYCEKERKRVRCSAAKWSCGQVCKKTLLCKTHKCENVCHEGDCSTCSYTSIQSCQCGLEKAKRPCNDPFWKCEQVCDKSYSCGFHKCEKVCHSGDCGSCPNSGMSSCPCGANQRIVQCPDVMETCLGTCGKKHDDCDHNCPEKCHKGPCPPCQVLIQKKCQCSTHTRSLPCSKEFKCETKCRGIRPCGKHGCARKCCSGNCPPCEKICDKPLQCGRHKCTNICHHGPCYPCPRESKVTCRCKETFVTVPCGRERHTKPPKCTLMCKIKYKCGHIEENKHSCHFGDCPPCKAICDKEYPKCGHHCEAVCHANVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCHTPVPIVCFGEHETDDQPCHSAARRPCGRECGRPLKCSNHKCTLLCHLLSPVPEYPNVPSICRECNKECLVPRPEKCSHKCPKQKCHPGPCPPCEILERLACHCGITNIYLRCREISIATDEMLSCKQQCPKNLACGHLCPNICHPGICDGNNCTKKTKIHCSCGNLKKGIACDVVRRGEAKIDCDETCKAKKIAAKLENEKKKERLKALEEEKNKKELAEYEWKLSGRKKKYKEKKVVVGNDDRNILQKYWIPILSVLIAAAAASYFLIFYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- -
- 80% Identity
- -