Basic Information

Insect: Laspeyria flexula
Gene Symbol: -
Assembly: GCA_905147015.1
Location: LR989977.1:2231768-2258584[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.3 5e+02 1.9 0.6 2 19 488 505 487 509 0.83

2 18 0.0076 0.52 11.3 0.0 1 23 519 542 519 542 0.95

3 18 1.1 75 4.5 4.0 1 19 665 683 665 685 0.97

4 18 0.041 2.8 9.0 3.8 2 23 747 768 746 768 0.95

5 18 0.4 28 5.8 1.8 1 23 780 804 780 804 0.90

6 18 8.2e-05 0.0057 17.5 0.4 2 23 811 834 810 834 0.97

7 18 0.08 5.5 8.1 0.2 1 23 840 862 840 862 0.93

8 18 0.0039 0.27 12.2 2.9 1 23 868 890 868 890 0.98

9 18 0.71 49 5.1 0.0 2 20 901 919 901 921 0.89

10 18 0.065 4.5 8.3 0.2 1 23 1000 1022 1000 1022 0.96

11 18 2.4 1.6e+02 3.4 7.2 1 23 1029 1051 1029 1051 0.95

12 18 0.0016 0.11 13.4 1.8 1 23 1093 1116 1093 1116 0.95

13 18 0.00022 0.015 16.1 0.6 1 23 1123 1146 1123 1146 0.98

14 18 0.045 3.1 8.9 0.2 2 23 1168 1190 1167 1190 0.96

15 18 0.019 1.3 10.0 2.1 3 23 1217 1238 1216 1238 0.92

16 18 0.0002 0.014 16.3 1.1 1 23 1248 1270 1248 1270 0.97

17 18 0.00014 0.0097 16.7 0.1 1 23 1276 1298 1276 1298 0.97

18 18 0.00044 0.031 15.2 0.7 3 23 1306 1327 1304 1327 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.3	5e+02	1.9	0.6	2	19	488	505	487	509	0.83
2	18	0.0076	0.52	11.3	0.0	1	23	519	542	519	542	0.95
3	18	1.1	75	4.5	4.0	1	19	665	683	665	685	0.97
4	18	0.041	2.8	9.0	3.8	2	23	747	768	746	768	0.95
5	18	0.4	28	5.8	1.8	1	23	780	804	780	804	0.90
6	18	8.2e-05	0.0057	17.5	0.4	2	23	811	834	810	834	0.97
7	18	0.08	5.5	8.1	0.2	1	23	840	862	840	862	0.93
8	18	0.0039	0.27	12.2	2.9	1	23	868	890	868	890	0.98
9	18	0.71	49	5.1	0.0	2	20	901	919	901	921	0.89
10	18	0.065	4.5	8.3	0.2	1	23	1000	1022	1000	1022	0.96
11	18	2.4	1.6e+02	3.4	7.2	1	23	1029	1051	1029	1051	0.95
12	18	0.0016	0.11	13.4	1.8	1	23	1093	1116	1093	1116	0.95
13	18	0.00022	0.015	16.1	0.6	1	23	1123	1146	1123	1146	0.98
14	18	0.045	3.1	8.9	0.2	2	23	1168	1190	1167	1190	0.96
15	18	0.019	1.3	10.0	2.1	3	23	1217	1238	1216	1238	0.92
16	18	0.0002	0.014	16.3	1.1	1	23	1248	1270	1248	1270	0.97
17	18	0.00014	0.0097	16.7	0.1	1	23	1276	1298	1276	1298	0.97
18	18	0.00044	0.031	15.2	0.7	3	23	1306	1327	1304	1327	0.95

Sequence Information

Coding Sequence: ATGTCTGAACCCCAAGCACCTCTAATCTTGTTCATGGAGAATGCGAGTGGCGAAGATGTGGCACTCAAGATAGAATGTGATGATAACTTCCAGACATTCCTCGATAAAGCCAAATCATTACTCGGTTTTGAAGTGGACATAAACTCCATAACACAAAACCAGCCAGTATCACCAACAGACAATATATACCAGTTTCTTATAAACACAGAACAGAATATGCAAGGGGAAGATCCCTTGGCGCAAACATTTGATCCATTATTGGACACCAACGATGAAGCCAATGACTTGGTTTATATATTGGACGATGGTACTCAAATCAGAGCTTCACAGATACACTTTGATAATGACGATCCGTTAGTTGATTTGACAGCGGAGAAAATACCATTCGTTAAATATGCTGATGTGATTGATGATGTAGATATTGAAAATCTGGACATAGAGGAAACGAAAAAGATAAATATTGTTGAGAGTCCCGTTTCTAGATGGTCTAGTAAAAATTCCAGTCCAAAATGTAGTTTTGTTAATTCGTTACCATTCAGACTAGTGTGTAACAATACTTCGGGTTTCGAAGCTCAATTTACTAAGTACTTAGAAGCTAATACCAATAAAACTTATGCGACTTTAAACCCTGTAACTATTCGGAACAAATCTCCGAAGAGTCTAATAAAAGATAATTTCAAAAACTATGATGGTTACCAAAGGAGTGATAGTCTTTCTTACACTAGGGAAGACATATTGAATATGTTTAAAGATTCTCCAATGACGTCATTGCCTTATGACCAAGGATATAGTGAAAGGAGACATGTGAGAAAGACGGACCCATCACGGCTCGTCCACAAAAGTTGGAACAAACCTATGACTTATATGGACATAGACGGAGTTCTAATAGGGGAAAGTGAGAATCAAATATGTTTTATATGCGGTAAACACGTAGACAATAATGTAGACAAACTGTATCTCTTCGATAACGAAGACCAAAGGCTTCACCGCTGTTCACCGCAGAAGAAAATGTCCACACAATTGAAAATTATCTGCGAGTGCTGTTTGAATGAAAATTTTAGACCTTGCCGAATGAAAAGTGCTAATCAGTTTTTGAATCCGGATGAGTTTCTTGTCATAAGAAATAACCAGCAGTATATTTTTCAGAAAATAAAGAATTTTAGTTTTACTCATTTCGGGAAAGGTAAAATGAAAAAGGATTCTAAAGATAAAGAAGAATTTGTCAAAGTTGAGATCGGTTCAGATGGGGAGATTATAACTAAGCCAATTGACAATGATCCTCAGTCAGATGACATCATTATAGTGAAGGATGACAAAAAGGAGGGTAGCTCAAGTGATGTGGAGATCATCGAGCCTGAACCGGAGATTGATAACATCATCGATAACTTGGAGGAAGATGATGAGGAGGTGAAGGAGTTTTTGGGGAAATATTCTTGTGATAATAATGAAGTTACGGAGCTTAAATGCAGATTTTGTGAAAAGATATTCGCTGATGTGGCCGAAGTTTCTGAACATTGTGAGGAACATAAACACGATCTAGAGGATGGAGAGGTTTTCCCTTGTCCGCTTTGTAATTATGGTTATGCCAATTTAAAATGGCTGAAGGGCCATCTGAAGGCAGCTCACGAGAAAAATAAACAAATTGGCGGTGATACAACAAAAGAAAACGTTAAAAGTGGCGTAGATCGTTATTCACCGAGAGACAATCCACATATAGCGACGCGCACTCGCAGTTCTAACACTAAGACTGGAGATGAAGAAAAGAAAGATAACGAGAAGGCTTCGGAAGAAATAAAGAATGAATGTGTAACGGCCACGGGGGATCACGAGCTGCCTATTATTAAGACGGAGGTGAAACAAGAAGCTATTGATAGCAGTGAAGATGAGATTTGGATTGTTCAGACAGCTGATATGGAGTCCAGCCAAGACCTGGAGAAACTACTAGGAGCTACCAAGGGTACTAGCGGTCAAGAGGTGAAATCCGAGAAGTCCTTCAAATGTTTTCAGTGCAGCCAAATTTTTCCGACTGCTGAGAGTCTATCCTCACACTGCTGCAAACGTCGGGGCAGGAAGCGGAAAAGCAAAGATGGGAATATCATATGCATACCGACTGAGGAAGACTTTTTAAAGAGAGCACAAGGTCGTCCCACAACAGATTATTTGGGTGACAACGATTTTCTAATCACGCGTCCAAGAAAGCGTCGCAGCAAGCAACCAACGTGTAATCCTCAGATAGTCACCTGTCACAATTGCAACGAATCGTTTACGTCAAAAGTGAGACTTAAGTTTCATATGCAATTTCACGAGAACACATCGCTGTTGACTCCAGAAGGTCGGTACACGTGCTCCGAATGTTCTGGAACATCGTTCAGTACGGAAACGGAGTTATTCGACCATGTGCATTTTCAACACGTCAAGCAGAAGAGGTGGCAGTGTCCCGTAGAAGACTGCGGGAAGACGTTCTTCTTGAGGGCAACACTAACAAAGCACAGTCGCACACACACAGACACTCGTCGTTACGTGTGTGTGACTTGCGGGAAGAGATTCTTAGACAAGCAGACCTTGGATGAACATGGAGTCACACATCTTAGGATAAAGCCGTTCCAGTGCCACATCTGCTTGAAGCAGCTGACGCGTCGCTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTCGCGCCGCGCCTCGTGCGCGTCTGCGCCGTGTGCCAGCGCGCCTTCAGGGACCTGCCGCATGCGCAGGAACATGCTATGAAGTCTGCTGAATGTATAGAAGCGTTCGCCAACGAGTTGAAGGAGGAAGCCGAAGAGGTGATGGTCCAACTTTCGCCCACTAGTGGGCTTGTGAGACACACCGTGCAGATTGTTGAATCCCCTACGCTGTCCAAACCAATCAAGCGACAGGTGACCAACGAAGTGGGGGAACCGCTACTTGCCCAGCTGGCTGACGAAGCGAGGGCCATCATCAGAGTCGTGGAAATTGAGAAGGCGTTCAGATGTGAATATTGTGAAGATGTGTTCTACTTGGAGAGCGGATTGAACAACCACCGGGTGATACACAAGGGTGTTAAGAACCCTTTCACTTGTCACATCTGCAAAGTGAGCTTCGCTACGTATTCCAGATGTACTACCCACAAGACAACGCACGGATTCTACAAGAGGTCTCTAGCTGACGCCAAGAAGCAGGCTGATGGTAGTACTCAGAAGGATGCTGGACCCTCATCAGCCACTGGGATACTTGGATACGGAGACTTTCCCGTTGCCAAGCATTTCTTGTGCGAAGATTGTGGAAGATCATATCTTCACTGGACCTACCTACAAGTACATCGTCGCATGAAACATATCAACGAGAAATTTCTTTACAAATGCAATCAATGCGAGATCACCTTCCCTAACAGTTGGAGTTTGGCTTACCATCGTAAGAAGGTGCACGGTAAGACCAGCCCTGACGACCCCGGCACCAGTACCAAGACCACGAGAGATGATTACCGGATCCCTTGCCGAGACTGCGAAGAAATACTCCCGAACAAGACAGCTCTGTACAAACATAGAAAGAAGGAACACAGTGATACTAATATAACTGCTACAAGAACTAATAATACGACAGAAACATACGGCGGTGAAACAAGTACCTCAAACGCTTGTTCGCACTGCCCAGCCACTTTTACCCACGTGACAGATCTACACAAGCATGTCATCGAGGTCCACAAACAAGAGGGCGGTCCGCGGCGGCCACACCCGTGCCCGGTGTGCGGCCACGCCTTCCGCACTCTGTCCATGCGCAACGAACACCTGCGGGTACACACCGGGGAGAGACCCTTCCCTTGTGATGTCTGCGGAGTCGCCTTTAGAAGGTCGACGGCGATGCGTAACCACAGACTGATCCACAGCGGCGTGAGGGCGTGGGCTTGCGGCCGATGCCCGAAACGGTTCCGGATACGTTCCGATCTTAGGACACATCTCAGACTTAAGCATCCCACAACTTTGTTAGTTTTTGAGATGGAAGGTCTGAATCCATCGCCAGACGAAGTGATGAAGCACTTGGCTATGCACAACATATCACACGACAAGATTATTGAGATCACCAAGATGTCGTTTGCTAAGGGTACTTCTAACGTGGTGCCCAACAGTGCACGTGCCCTGTCTGCGCTGGGCAATGTGCCTCGCTCGCACGTCGTGTGTAGCAAGCCTACTGCAACACCGACTAACACAATGGAGGAGTTCCAAACGGCTCGTCGTGGTCGCGGCATATCCAAGACCCCGCGACGGCCCAAGATCCTGCAGCGCGCGCAACACTTCAGCGACACGCGCAGCGGTAACACCGAGGAATTATCTGACCTACAACTGTTGCTGCAGGATGGAGTGCTAGTCAACGGAAATCAGATGGTGCAACTACAATTAGATGATCCCATGCTGTTGGAGTAG
Protein Sequence: MSEPQAPLILFMENASGEDVALKIECDDNFQTFLDKAKSLLGFEVDINSITQNQPVSPTDNIYQFLINTEQNMQGEDPLAQTFDPLLDTNDEANDLVYILDDGTQIRASQIHFDNDDPLVDLTAEKIPFVKYADVIDDVDIENLDIEETKKINIVESPVSRWSSKNSSPKCSFVNSLPFRLVCNNTSGFEAQFTKYLEANTNKTYATLNPVTIRNKSPKSLIKDNFKNYDGYQRSDSLSYTREDILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKSWNKPMTYMDIDGVLIGESENQICFICGKHVDNNVDKLYLFDNEDQRLHRCSPQKKMSTQLKIICECCLNENFRPCRMKSANQFLNPDEFLVIRNNQQYIFQKIKNFSFTHFGKGKMKKDSKDKEEFVKVEIGSDGEIITKPIDNDPQSDDIIIVKDDKKEGSSSDVEIIEPEPEIDNIIDNLEEDDEEVKEFLGKYSCDNNEVTELKCRFCEKIFADVAEVSEHCEEHKHDLEDGEVFPCPLCNYGYANLKWLKGHLKAAHEKNKQIGGDTTKENVKSGVDRYSPRDNPHIATRTRSSNTKTGDEEKKDNEKASEEIKNECVTATGDHELPIIKTEVKQEAIDSSEDEIWIVQTADMESSQDLEKLLGATKGTSGQEVKSEKSFKCFQCSQIFPTAESLSSHCCKRRGRKRKSKDGNIICIPTEEDFLKRAQGRPTTDYLGDNDFLITRPRKRRSKQPTCNPQIVTCHNCNESFTSKVRLKFHMQFHENTSLLTPEGRYTCSECSGTSFSTETELFDHVHFQHVKQKRWQCPVEDCGKTFFLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLRIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCQRAFRDLPHAQEHAMKSAECIEAFANELKEEAEEVMVQLSPTSGLVRHTVQIVESPTLSKPIKRQVTNEVGEPLLAQLADEARAIIRVVEIEKAFRCEYCEDVFYLESGLNNHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGSTQKDAGPSSATGILGYGDFPVAKHFLCEDCGRSYLHWTYLQVHRRMKHINEKFLYKCNQCEITFPNSWSLAYHRKKVHGKTSPDDPGTSTKTTRDDYRIPCRDCEEILPNKTALYKHRKKEHSDTNITATRTNNTTETYGGETSTSNACSHCPATFTHVTDLHKHVIEVHKQEGGPRRPHPCPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHSGVRAWACGRCPKRFRIRSDLRTHLRLKHPTTLLVFEMEGLNPSPDEVMKHLAMHNISHDKIIEITKMSFAKGTSNVVPNSARALSALGNVPRSHVVCSKPTATPTNTMEEFQTARRGRGISKTPRRPKILQRAQHFSDTRSGNTEELSDLQLLLQDGVLVNGNQMVQLQLDDPMLLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -