Basic Information

Insect: Laspeyria flexula
Gene Symbol: -
Assembly: GCA_905147015.1
Location: LR989962.1:3100094-3117459[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00045 0.031 15.1 3.1 1 23 242 264 242 264 0.97

2 11 0.00019 0.013 16.3 6.6 1 23 270 292 270 292 0.96

3 11 0.0019 0.13 13.2 6.9 1 23 298 320 298 320 0.98

4 11 0.00038 0.026 15.4 1.5 1 23 326 348 326 348 0.97

5 11 2e-05 0.0014 19.4 0.4 1 23 354 376 354 376 0.97

6 11 4.5e-06 0.00031 21.4 0.2 1 23 382 404 382 404 0.98

7 11 6.1e-05 0.0042 17.9 0.4 1 23 409 431 409 431 0.96

8 11 6.4 4.4e+02 2.1 0.1 3 11 439 447 438 449 0.90

9 11 3e-05 0.0021 18.8 0.4 1 23 473 495 473 495 0.97

10 11 0.00011 0.0077 17.0 1.4 1 23 554 576 554 576 0.96

11 11 3.2e-05 0.0022 18.8 4.3 1 23 586 608 586 608 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00045	0.031	15.1	3.1	1	23	242	264	242	264	0.97
2	11	0.00019	0.013	16.3	6.6	1	23	270	292	270	292	0.96
3	11	0.0019	0.13	13.2	6.9	1	23	298	320	298	320	0.98
4	11	0.00038	0.026	15.4	1.5	1	23	326	348	326	348	0.97
5	11	2e-05	0.0014	19.4	0.4	1	23	354	376	354	376	0.97
6	11	4.5e-06	0.00031	21.4	0.2	1	23	382	404	382	404	0.98
7	11	6.1e-05	0.0042	17.9	0.4	1	23	409	431	409	431	0.96
8	11	6.4	4.4e+02	2.1	0.1	3	11	439	447	438	449	0.90
9	11	3e-05	0.0021	18.8	0.4	1	23	473	495	473	495	0.97
10	11	0.00011	0.0077	17.0	1.4	1	23	554	576	554	576	0.96
11	11	3.2e-05	0.0022	18.8	4.3	1	23	586	608	586	608	0.97

Sequence Information

Coding Sequence: ATGTGTATGCCTACTCCTAATAATGTTTCGGGCTTCGGTTACTCGTGGGGCTTCACGAGTTCCGCAGATCTTACCAAGGGTGAGGTGGAGACACCTAGTAGTTTGAGTTATACTCTGGGAAACACGGTATCGCCAGAGACAACCCTGACTGTTATGTCCACAAACAAGCCACAAGTACAAGAGAAAGTTGGTGCAGTAACAGTGGCTGTATCTAATTCTGGTGCACAGTTAACAAGGGTTGTCACAACAGGCACACCTATATCGGGAAGAAGGGCTATGTTTGTAGTAAATGATGGGCCTGGCCATACATTAAACAGGGTCTCCCAACAAAATCAGACAGCTACTATACAAACAACGAATTTAGCATCTAAGCCATTCATGACACCCATAGGCCCTATACAGTTAACAGCAGAGGAATGTAATGAGATTCTAATGAAACGAGCTCTCCAAGCTCAAGGGATACCTACACCTGTAATAGATGCCTCACAACTGAACCATACAATATTGAATGGAGGCCTGAAGAGCTTGGCAGAAGCCACAGTACAACAGACTCAGGCCGAGAGTATTCAAACAACGACTGTACATCAACATCATTTGTTGCATGCTAAACAGGAGCCGGGTACAACTAATAACTCTCCTAAAACGGTATATTCTCAGACGGAGCTGCTGAATACCAACTCGATGGTGACGTCACAGCCTCCCGCGACTGTCAAGGAGCGCCCCTACTCGTGCGGGGAGTGCGGGAAGTCGTTCCTTCTCAAACATCACCTTACGACGCATGCGAGGGTACACACTGGTGAGAGGCCGCATGTTTGCGGGCATTGCGGGAAAGCGTTCGCGCGCAAGCATTGCCTCAATACGCATTTGTTGCTGCATTCCGCTGAACGGCCTTATAGATGTCATGAGTGTAAGATGGCGTTCACATTGAAACATCATCTCGTCACGCATTCTAGGGTACACAGTCGCGATCGTCCGTTCGTATGTAACGAGTGCGGGCGCGGGTTCCCTCTCAAACGCCACCTGGTGACGCACAGCAAGTACCACGCCGGTGAACGACCTTATGTCTGCGCCGACTGCGGGGAAAGCTTCGCGCAAAAGGCGCACCTAGTAATGCACAGTCGGTTCCACGGCTCGCTGTCCCCGTACGTGTGCAGCGACTGCGGCGTGACGTTCGCGCGCAAGTTCCAGCTCGTCAACCACGGCCGGGTACACGGACGAGTGCCGCACGCCTGCCCCGTCTGCGGGAAGGAGTTCCTGCAAAAGAGGACATTGGTCGCTCATATGAAAATCCACACGGGAGAAGGAGCTGTCGCATGCTTAGAATGCGGCGAAGCTTTCAAGTATGACTTTAAACCGCAAATTGTACAGGTTATAGGTGCTGATGGACAAATAGTGTCGGAGAAGACGACGCCTGGATACGCGTGTCCTGAATGTGGTTCCTGTTTCAATACTAAGGAGGCGCTGTCGCTGCACGTGCGGCTGCACGCGGGCGACCGCACGTGCGTCACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCCGGCCTCGTGCCCGCGCACAATCAACCAATCCAAATTATATCAGCTAATCCCAACAATGTTGTACATACGCAAGTTATAGCTACGAATCACCATGTAACACCTCCTCGACCGAAGATTCATTTCTGCGGCGAGTGTGGGAAAGGGTTCGCAGCTAAACATGGCCTCCTAGCACATCAAAGAAGACACCCCGACGGCAGCTGTACACTTCGCACGCACGTGTGTGACCAGTGCGGGAAGGCGTTCTTCCAGAAGAACCACCTCATGTTACATCAGAGACAACACATGGACCTGCCACCTAGAACTACTCCTGTAACGCAGCAAGCACAACAACAAGCGGCGCAACAAGCCGCGCAACAAGCGCAGCAAGTGCAACAACAGGTGCAACAACAAGTGCAACAGCAACAACACCAACAACAGCAACAACAACACCAGAACAGTCTAGAGTTAGAGCAAGACCACCAACAAGCAACGCATATACAAGTCGTAACGAATAGATCTGGGCAAGTGATAGGCAACCAGATAGTAGTGGGCACGGTGGGCGTGGGCAGGCGACTGATGGCGCCGCAACTACACATCGTGGGCAGGGACACCAAGCCGCAGGTCACTCATATATCGCACAACAAACACCACAACGCTAGTGGCGACGCAAAAGAAGTAGGTGGCCTAGTACTATCCGCGGGTCGGAACGGACTAATAAAGTACGAGATATCACTGCCGCAGCCGACCTCTGTAGTCCAAGTGCAACAACTCGACTGA
Protein Sequence: MCMPTPNNVSGFGYSWGFTSSADLTKGEVETPSSLSYTLGNTVSPETTLTVMSTNKPQVQEKVGAVTVAVSNSGAQLTRVVTTGTPISGRRAMFVVNDGPGHTLNRVSQQNQTATIQTTNLASKPFMTPIGPIQLTAEECNEILMKRALQAQGIPTPVIDASQLNHTILNGGLKSLAEATVQQTQAESIQTTTVHQHHLLHAKQEPGTTNNSPKTVYSQTELLNTNSMVTSQPPATVKERPYSCGECGKSFLLKHHLTTHARVHTGERPHVCGHCGKAFARKHCLNTHLLLHSAERPYRCHECKMAFTLKHHLVTHSRVHSRDRPFVCNECGRGFPLKRHLVTHSKYHAGERPYVCADCGESFAQKAHLVMHSRFHGSLSPYVCSDCGVTFARKFQLVNHGRVHGRVPHACPVCGKEFLQKRTLVAHMKIHTGEGAVACLECGEAFKYDFKPQIVQVIGADGQIVSEKTTPGYACPECGSCFNTKEALSLHVRLHAGDRTCVTDLCALTAALQPGLVPAHNQPIQIISANPNNVVHTQVIATNHHVTPPRPKIHFCGECGKGFAAKHGLLAHQRRHPDGSCTLRTHVCDQCGKAFFQKNHLMLHQRQHMDLPPRTTPVTQQAQQQAAQQAAQQAQQVQQQVQQQVQQQQHQQQQQQHQNSLELEQDHQQATHIQVVTNRSGQVIGNQIVVGTVGVGRRLMAPQLHIVGRDTKPQVTHISHNKHHNASGDAKEVGGLVLSAGRNGLIKYEISLPQPTSVVQVQQLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00932957;
90% Identity: -
80% Identity: -