Lfle012754.1
Basic Information
- Insect
- Laspeyria flexula
- Gene Symbol
- Zfy1
- Assembly
- GCA_905147015.1
- Location
- LR989967.1:503212-508262[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 8.5 5.9e+02 1.7 2.3 3 23 256 276 254 276 0.89 2 19 0.015 1 10.4 0.8 2 23 317 339 316 339 0.94 3 19 3.5e-07 2.4e-05 24.9 1.1 2 23 362 383 362 383 0.97 4 19 1.1e-06 7.4e-05 23.4 1.2 1 23 390 413 390 413 0.96 5 19 0.065 4.5 8.3 0.1 1 23 419 441 419 441 0.90 6 19 4.6e-05 0.0032 18.3 1.9 1 23 447 469 447 469 0.98 7 19 2.6e-05 0.0018 19.0 4.1 1 23 475 497 475 497 0.99 8 19 2.4 1.7e+02 3.4 2.2 1 23 570 592 570 592 0.94 9 19 0.00031 0.021 15.7 2.5 2 23 599 621 598 621 0.92 10 19 6e-07 4.1e-05 24.2 0.4 1 23 627 649 627 649 0.98 11 19 2.7e-07 1.9e-05 25.3 3.4 1 23 655 677 655 677 0.98 12 19 0.00039 0.027 15.3 1.1 1 23 683 705 683 705 0.98 13 19 0.00021 0.015 16.2 4.9 1 23 711 733 711 733 0.96 14 19 0.00045 0.031 15.1 1.8 1 23 739 762 739 762 0.97 15 19 5.3e-07 3.7e-05 24.3 0.4 1 23 842 865 842 865 0.98 16 19 5.6e-05 0.0038 18.0 2.9 1 23 871 893 871 893 0.97 17 19 0.00066 0.045 14.6 0.1 1 23 899 921 899 921 0.98 18 19 0.00011 0.0073 17.1 2.1 2 23 927 948 926 948 0.95 19 19 0.0055 0.38 11.7 0.3 6 23 958 975 957 975 0.99
Sequence Information
- Coding Sequence
- ATGAATAACGTAACGCAACAACTGTTTTTACCAAATGCTGGTGTAAACCAGCCATCTCCGCCTTCGCCATCGTCGCAAACTACGGTGGATATGCCTGTTCCTGCTTTAGAAGTCAATCTTCAGGATGTTCGGGACTTCTCTAACGTGTGTCGAACATGTGCCACTATCACAGAGTTGGTCATCCCCATATTCTCTGGACAGGGACTGCATTACAACTTGGCTGAAAAAATAAACCAACACATGCCTATACAGGTTGCAGAGACAGATATCCTGCCCCTAGTAGTATGCTTACAATGTTCAAGTCAGTTACTGGCCTGGCATGAGCTGGTGAACTGCTGTGAGCAGGCTGACCAGGCACTACGATCTAAAATAGCTGCTGATACAGGGACTGATATTCCTGCAAAGGACCCAAAAACAACAAAGCCAATACCAAACCCCACCACACACGAGGAACCACAGAACCAGTTTTACACCAAAGTTAAAAACATTATCATGGATTATTTTCATAACTTGGACATTCAAGACATTACTGATCTGGAGTTTGTTTGTCAAAAATGTGTCGAAAAACCCGCATTGACTACTGTGGACAGTCTTAGTGAACATATGAAATATGATCACACATCTCATGTGAATGATGAGAATGACATCAAGCTGTTTATCAAAAACTATATTACCTTTGAAGAAATGTTAGTTTTTGAGGACTCGGATCGGGATAAACTGTCTGAAGTCAATGAGAAGCCTGAAAAACCACTTAGCAATATTTTCTGTCCGTTCTGTCCCAACGTGTTCTCTTCAACAACAAGATTTGTGTGTCATCTTAATAAACATTTCAAGGTTTGCGTCGGGGATGGTATAATGTGCTGCAATTCTATCTACAACGATAACAAAAGCTTCGTGACGCACTTACAAGATGCTCATGTTGGTGTCAAATTAGATGAGACACTAAAAGTATGCAAGAGTTGCGGCTTCACCACTGAACATAACAATGAACTTCAGGAACATATCAATGAAGTTCATCAAACACTAAAAATTGATAAAGGAAAGAAAACGCAGAATCCTAAAAATCAAAAATACATCCCAGCCGTGTGTCCCGAATGTAATAAAACTTTTTCTAATAAATACAATATGTTCGTACATATGAAGAGTCACGATGCACCAACCACTTCATATTCTTGTGATATATGTAAGAAGACATACAAAAATTCGACAAATTTGACCAACCATATTAAATTAGCCCATGAAGGGATATTAAATTTCCTATGTTCCGAGTGCGGTGAAGCATTTCCTACACGAGTTGCTCGCGATGTCCACTCACGACTACACACGGGAATCAAACCATACAAATGTGAACACTGTGGCAAGTCATACCGCGCCAAAAATACTCTCGACCGACATCTAGATATTCATCTAAACATAAGGAAATATGAGTGCGAGATTTGTTCCAAAAGATTCAGGAAGAAATCGCATCTCGACTACCACGTTAAGACTCACAGCAAGCACCAGAGAGTAAAAAATCACATAGTTAATGAACACAATACTGAAGAATCTTATCCAGATTTTACTGACTCCAGCGTGTCTGAGGTCGAGGACAATAATATAGATAGTTTTGATGACTTAACACAGTGCAATATGAGGAAGGACAGAATGGATGATGAGACCAGAATAGAATTGAGCCAAGTTCAAACAAAAATAAATGGAAAAGTGTTTTACACTTGTATAATCTGCGGTAAGAACTTGAGTTCGTCACACACGTATGTGTTTCATAAGAGAATACACACGGGCGAGCGCCCTTGCGTTTGTCACATCTGTGGAAAACAGTTCCGAGCTCCGAACGGTTTGCAGCGACACCTGACGCAGACACACGAACGTTTGTGGAGATACCCCTGCAATCTGTGTCCTAAAAACTTCGCCAATTCACAGAATTTGAAGCAACACTTAAGGATACACACGGGCGAGCGACCTTTCGTGTGTCCACACTGCGGCAAGAGGTTCACGCAGAGTGGCTCATTGCACGTGCATTTGAAGACTCACAGTGAACAATTTCCTTACCATTGTGCAGAATGTGGTGCCAAATTCCGTCTAAGATCGGGACTGGCGAGGCATAGACTGAAGCATACCGGAGAGCGGCCGCACGTATGCGGTCACTGTGGGAAAGGATTCCGACAACGTCACGAACTTAACTCTCATAGCTTATCTCATTCCGATAGTAAACCTTTCACTTGCGTATCGTGTGGAGCCGCATTCCGCCAAAGAAGAGCTCTCAGACATCACACAAAGAGGATTCATGAGAGCGCTCTAACGCCGAGAGAAGTGCCCAATCACGTCGGCGTGGTAGCGTATTTGGACATCAAAGGCGAAGAAAACGACGCCGACGGTAGCAAAGTGGCGAGGTGGGCGGAGGCGCCGAAGACCTCGACGGTAGGCGCGGACGGGCGGCGGCGGGCGTGGTGCCAACCTTGCAACAAGAGCGTCGCAGTAGTCTCGTGGCGGAGACATCTTCGTCTACACAACGGAGAGCGGAGGTACAGCTGTCACAGTTGCGGACGAGCGTTCGCGGACAGCGGGAACCTCGCGAGACACGTGCGGACATTACACGCACAAGAGCGGCCCTTCGCGTGCCCCACGTGTCGGAAGACATTTACTAGGAGAGCACACTTGGACGATCACACAAAGTCGCACTCGGAGCGGAGGGAGTTCATCTGCGACGTGTGCGGCAAGGGCTCGAAGTCCGGCGCCGCGCTGCGCATGCACGTGCGCACGCACGGCGCGCCGGCGCTGCACTGCGCGCACTGCCCCAGAGCCTTCAAGCGCCGCGCCGAGCTGCGCGCGCACCGCTCGGTGCACTCGGGCGAGCGCCCGCACGCATGCGCCTGCGGACGCGCCTTCCGTCTGCGCACGCAGCTCAACACACACGCCCGCACGCATTCTTGA
- Protein Sequence
- MNNVTQQLFLPNAGVNQPSPPSPSSQTTVDMPVPALEVNLQDVRDFSNVCRTCATITELVIPIFSGQGLHYNLAEKINQHMPIQVAETDILPLVVCLQCSSQLLAWHELVNCCEQADQALRSKIAADTGTDIPAKDPKTTKPIPNPTTHEEPQNQFYTKVKNIIMDYFHNLDIQDITDLEFVCQKCVEKPALTTVDSLSEHMKYDHTSHVNDENDIKLFIKNYITFEEMLVFEDSDRDKLSEVNEKPEKPLSNIFCPFCPNVFSSTTRFVCHLNKHFKVCVGDGIMCCNSIYNDNKSFVTHLQDAHVGVKLDETLKVCKSCGFTTEHNNELQEHINEVHQTLKIDKGKKTQNPKNQKYIPAVCPECNKTFSNKYNMFVHMKSHDAPTTSYSCDICKKTYKNSTNLTNHIKLAHEGILNFLCSECGEAFPTRVARDVHSRLHTGIKPYKCEHCGKSYRAKNTLDRHLDIHLNIRKYECEICSKRFRKKSHLDYHVKTHSKHQRVKNHIVNEHNTEESYPDFTDSSVSEVEDNNIDSFDDLTQCNMRKDRMDDETRIELSQVQTKINGKVFYTCIICGKNLSSSHTYVFHKRIHTGERPCVCHICGKQFRAPNGLQRHLTQTHERLWRYPCNLCPKNFANSQNLKQHLRIHTGERPFVCPHCGKRFTQSGSLHVHLKTHSEQFPYHCAECGAKFRLRSGLARHRLKHTGERPHVCGHCGKGFRQRHELNSHSLSHSDSKPFTCVSCGAAFRQRRALRHHTKRIHESALTPREVPNHVGVVAYLDIKGEENDADGSKVARWAEAPKTSTVGADGRRRAWCQPCNKSVAVVSWRRHLRLHNGERRYSCHSCGRAFADSGNLARHVRTLHAQERPFACPTCRKTFTRRAHLDDHTKSHSERREFICDVCGKGSKSGAALRMHVRTHGAPALHCAHCPRAFKRRAELRAHRSVHSGERPHACACGRAFRLRTQLNTHARTHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -