Basic Information

Gene Symbol
-
Assembly
GCA_905147015.1
Location
LR989974.1:6526601-6531100[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 1.3 1.8e+03 -0.4 0.0 2 13 74 85 73 90 0.85
2 7 0.0034 4.5 7.9 0.0 21 43 338 361 328 364 0.87
3 7 0.5 6.7e+02 0.9 0.3 13 43 426 461 413 464 0.68
4 7 0.004 5.3 7.6 0.2 22 46 579 608 562 608 0.74
5 7 0.005 6.8 7.3 0.1 3 45 659 710 657 711 0.79
6 7 9.4e-05 0.13 12.8 0.2 13 42 833 869 817 873 0.79
7 7 0.21 2.9e+02 2.1 0.1 2 15 1027 1040 1026 1087 0.80

Sequence Information

Coding Sequence
ATGGAGCAGGCAGTTGTAGTGAAGACGGAGGTGCAGTCCAATGGAGATATACTGCTCTTTTATGTTGATGAAAATGGTGGCAATGAAGAAGGGGTACTAACAACAGTACAAAACATTGAGAACCAAGCGTTAGAGCTACAACAAGACAACTCGTACATATTACCACATATCGGAGACATTGACAATGTAGTTAATGTGCCTCAATCTAGCTCACAGCCAGAAAACTGGACTGAAGATGACATCAAACGACTCCTCGTATTCTACAATGATAATAAACAAACATTCATATCCGGCACTACAAAAAAGAAACATCTCTGGACCGTTGCTTGCAAGACGATGCTGGTTGGAAAGAATCCTATTACATGTGAAATACAGCTCAATAGTCTAAAGGCAAAATATCTTGAACTTTGTAGCCATATACAAGAAGGTGTTTATGTTAAATGGCCATATTTTGGACTATGTCATCAAGTTTTTCAGGATGAATCCGATTCTAATGAGGAGTATGAAGTTATGACCGAAACTCAACCAAGTACAAACACGAACAGTAACCATGCAAATATTACGGTTATGAAGAAAGAAAATACTAGAACAACAGGAGACGAAAAGGTTGAGTTGATGTTGAGTTTATATCTGAAATATAAGCAGAACTTTAATCAAGAATATCGTAGAAAAGGTTTGTGGGAAATGATTGCAATGCAGATAGGAGAGGACGATGGGGAGTACTGGCAAAAACGGTTCTTAAATTACAAGCAGCATTATCTAAAATTGCTTGAAAAGAGGAGGGAACACGGCTCTGAAGGTATCAACTGGCCTTATATGGCATTTTATGACAAAATTTTTGAAGGTGATGAAGATTTTAGTAAAAAATATATAAATCAAGAATATAGAGCTATAGAGAATCAGGCTGTATCTGAGGAGCCTAGAACTTTAGAGTGGGATAACACTGAATTGACTGTTTTAGTAAAGTATTGCTATGACTGCTTTGATGAATTTGAAGACAAGACTATACCTAACAATTTCCTATGGAATGAAATTGGTCGGCTTTTGGACAAGACTGCCGATGACTGCAAACAGAAATATGAAGATATGAAAAATGAACACTTAGACAAATATATTGTAGGTGGTTATGGCTTACGAAATCGTAAACCTATAGCAATATTATTTGACAATATTATTTCTAAAGAAATAGAGTCGCAAATGGAACAATTAAGAAATAAACCGGAACAATTGGAACTGTGGAAGACTGAGGAGTTAGATGAATTGGTACATTTCTTCTACGAAAACATTGAAATGTATAAAGACATGATTTGTCATTTTGTTTGTTGGGCTGCGGTTGTGAAAAAGTTGAAGAGGCATTTGCAAAGTTGTAAGGGACAATGGGAGGACCTTATGGCTCTATACAAGACTATATTGAATGATAAAAAAGAGAATCCAGACATGCAAATAGACTGGAGGTATATAGAACTGTTTGATAGAATATTCGATTACGGTATGGACACTAATTTGCTGACAGGATACGATAAACTGAAGACATCCACAAATCAGGATTCGGTGAAAGTTGGTGTTAAAAAAATAAAAATAAAAACAGATGACATTCCTGAAGACTATTCTGATGACGATGAATCTTTTGACGAGAGAGGTTTCACTAAGCGCACGAAACGACGCACAGGAGACTCGAAAGCTTTCAAAATACTAGAGTACTATCAGAAGAATAAAGATAAGTTCTCTACTACTAACAGGAACAAGCACTCGTTATGGGAAATATTGGCTAAACAAATAGGAATTTCAGCAACCCAATGCGCACATAGATTTAGAAATCTCAAACAAGTATACACAGCTTATGTTCAGAGGGAAATCAACAAACCAGAGATGCCGATTCTCTGGCCTTACTACGCTCTATGCAAGAAAGTATTCGGTTACCGAGCGATCAAATCCAAATTGAAGAATGGTAAACTTGATTCCGATGACAGTGAAGACTGGTCTGCGAAGGAAATTAAGCAATTAATAAACTATTTCTCTAGAAATTACGATTATATAAACAGTAACGTTGATGACAATTCAAAATGGACTGATTTGGCCGTTGAGCTTGGTAAAGGTGAAACGTCTTGTAAGGAAAAGTTCTTGGAATTGAGGAAGTCTTTTAGGAAATTGAAGACTATGAGGAGTAGGAACCCTGATGTTAAGATATCGTGGAAGTATTTTAATATGTTTGAGCAGATTTATAGTGCGAGGGAGGAGGGTGGGGAGGCTATGGATATTGATAGTTTGAGAAGCTATGTGGAAGTACCGGTGGTGTCTGATGAAAAGACTGAAGATGATGAATACCAATGCATAATAGTAATACCAGAAGGAGAAGATATAGAAAACGCACAAATAATTATACAAGAACCGACTGTAACAGAAGAACTTGTATCTTCTGAACCGACAGTCACTACAGAAGTAAAATTACCCTCTAAATGGACTAAGCGGACTAAGAAACTGCTTCTTATACATTATATAAACTACATAAGACTGCATAAAGGGAAGGAAATTAAGCCTAAAGAAATGTGGACAGAAATTGCTGCAAAATTACAAGATAAAACACCTCTGTCTTGTAGAAAAATGTTTGCTAAATTGAAAGCTAATCACAGTCAAATAGCTAGTGATGATCCTAATGTGAAAAAGACTCCATATTATGCACTCCTGGAGAAAATTATGCGTTTAAAACCGAAGTTCTCAAAGACAAAACAAAATAAGAATTTAAAAGACGGGAAGATTTACAAAGATGTCGTTTTACCTGATGATAAAGTCATTCAAGCATTACTATATTATCTAGAAAACATTGAAGACTTTGTTAGTCCTAGATATGAGAAGAAATATCTATGGACTGAACTAGCAAACTATGTTTGTGAACCGGTTACAAAAATGTTCAATAAAATTAACTATTTGAAGCAATTTTACAATATAGATACGGATGAAGTGGCCGGTCAAAAGACGCCCTTCGCTGCCTTACTAAAGGAAATCATTGCAAAAGAAATTGCAATAAAATTGGTAATTGACAATGAACCGAAACCATTAATAGAAGATTCTGGTATTGAAGTGCCATGGAATGATGACGAAACAGAACAACTGCTGGAATGGTATTTGAGCAATTTGGAGAAGTTTAAGAACCCTAAATTTGTTCGAAGTTATTTATGGATGGAGGTATCTGAAATTTTGAATAAAAGCGCTCTCGCTTGCTCTAAGAAAATGTCTGAAATTAGGACGCAGTACCGGAATATGGTTAGAGAAACACCTGGAGAATTGGCTGGTTGGAGATTCCTTGAATTATGTCAGAAAATCTATGGGACGGGCAAGAAGGGAAATCAGTTGAATTCCTTACAACCAGATGCCTGA
Protein Sequence
MEQAVVVKTEVQSNGDILLFYVDENGGNEEGVLTTVQNIENQALELQQDNSYILPHIGDIDNVVNVPQSSSQPENWTEDDIKRLLVFYNDNKQTFISGTTKKKHLWTVACKTMLVGKNPITCEIQLNSLKAKYLELCSHIQEGVYVKWPYFGLCHQVFQDESDSNEEYEVMTETQPSTNTNSNHANITVMKKENTRTTGDEKVELMLSLYLKYKQNFNQEYRRKGLWEMIAMQIGEDDGEYWQKRFLNYKQHYLKLLEKRREHGSEGINWPYMAFYDKIFEGDEDFSKKYINQEYRAIENQAVSEEPRTLEWDNTELTVLVKYCYDCFDEFEDKTIPNNFLWNEIGRLLDKTADDCKQKYEDMKNEHLDKYIVGGYGLRNRKPIAILFDNIISKEIESQMEQLRNKPEQLELWKTEELDELVHFFYENIEMYKDMICHFVCWAAVVKKLKRHLQSCKGQWEDLMALYKTILNDKKENPDMQIDWRYIELFDRIFDYGMDTNLLTGYDKLKTSTNQDSVKVGVKKIKIKTDDIPEDYSDDDESFDERGFTKRTKRRTGDSKAFKILEYYQKNKDKFSTTNRNKHSLWEILAKQIGISATQCAHRFRNLKQVYTAYVQREINKPEMPILWPYYALCKKVFGYRAIKSKLKNGKLDSDDSEDWSAKEIKQLINYFSRNYDYINSNVDDNSKWTDLAVELGKGETSCKEKFLELRKSFRKLKTMRSRNPDVKISWKYFNMFEQIYSAREEGGEAMDIDSLRSYVEVPVVSDEKTEDDEYQCIIVIPEGEDIENAQIIIQEPTVTEELVSSEPTVTTEVKLPSKWTKRTKKLLLIHYINYIRLHKGKEIKPKEMWTEIAAKLQDKTPLSCRKMFAKLKANHSQIASDDPNVKKTPYYALLEKIMRLKPKFSKTKQNKNLKDGKIYKDVVLPDDKVIQALLYYLENIEDFVSPRYEKKYLWTELANYVCEPVTKMFNKINYLKQFYNIDTDEVAGQKTPFAALLKEIIAKEIAIKLVIDNEPKPLIEDSGIEVPWNDDETEQLLEWYLSNLEKFKNPKFVRSYLWMEVSEILNKSALACSKKMSEIRTQYRNMVRETPGELAGWRFLELCQKIYGTGKKGNQLNSLQPDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01152119;
90% Identity
-
80% Identity
-