Lpla003551.1
Basic Information
- Insect
- Lasius platythorax
- Gene Symbol
- lov
- Assembly
- GCA_963971435.1
- Location
- OZ020535.1:19368366-19372615[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9 7.8e+03 -1.8 0.0 2 14 344 357 343 377 0.70 2 2 8.4e-16 1.3e-12 48.7 0.0 1 44 527 570 527 571 0.95
Sequence Information
- Coding Sequence
- ATGTCGAGCGTCGGGAACAGTCCTGACAGGATGGGTGTTCAATCCCTCTATTCTTTACGATGGAACAATCATCAAGCTCACATACAACAGTTCTTCCAAGAACTGCTACATGAAGAGAATCTGGTCGACGTGACCCTGATATGTGCCGAGAGCAGCGTCAAGGCACACAAAGTCGTCCTTAGTGCCTGCAGTCCTTTCTTCCAGAGGATATTCGCGGAGAATCCATGTAAACATCCCGTTATCGTGCTGAAGGATTTCTCGAATCATGAACTGTCCACGCTGATCGATTTTATGTATGGCGGCGAGGTGAAGATTGCCCAGGAGGAGTTACCAGGTTTAATGAGAGCCGCGGAATGCCTGCAAGTGCGCGGTCTATCGTCGTCGGAACCTAGGCTGGTGTCGGAGGAACCCAGgccgtcgtcgtcctcgtcgacGCTTCTGGAGTTTACCACGCCGGAGGACGCGCGACACGACACCCCGGAGGAGGACGACAACACGTTGGAGAACACGAGGGACATCAAGCCCACGCTGTTTCAACAAACGAGGGACCATCCTACCAAACCGCTTATTGGCCATATGAACTTTGGTATCCGCGAGAGCTGTAGCTCGCCGCTGATGCCGCGTCGAAAGCAGGCGCGTCCGCGCCGACGTTCCGGCGAACTGCTGCCGCAGGATCTGAGCAGACGCCCGACTCCGCCGGCCAGCTTGAGTCCATTGCCGAGCATTTTAAATCTCAGTGGTAACCAGCACCAGACACAGCAGCAGCTGCAACTGCAACAATCTCAGTATCCTCAACAACAAATAATCAGCAGAAATGATCAACAACAAATGATCAACGCTCAACAAAGTcaacaacaacagcaacaAGAGGATATGGCGGAGAATCTTTCAATGAAGAAATCCATGTCGCCGAGCGGACTGGATCAGCACCGTGTGAAGACGGAGGACAGCGAAGCGACGAGCAGTCCACGCGGTTCGCCGCTTACGGGGACGAGTCTGCTACATCCGGACGGTTCCATACAAGACATACCGACGGCCGTAGCGGCAGCGGTCGCCACCGTGATACCGTCGATATCTCTGTCGCAAACGCATCCCTCCGAGTACCTGACAAGCCTCAACCAGCTGGCGAGCCAATGGCTGCCCGGGCAGAGTCCACTGCCGCCGCCTCCACCGCAGAGTCATCATTCGCGCGAAGACAGTCCTCACGGGCCCGGTAGGTCCCATCCGTAtcagcaacaacagcagcaggAATCGTCAATAGCGTCGCGACGCACTTCCATGACGATGTTCACGCCATTGGACGGCGTGACACTTGGCGGCGGACTTTTCTCTCACGCCGGCACATACGAGAGGACAGTCCTCGCAGATTCGTTTCTCACGGATAATTTCAAGCAGGAGGCGTTGCAGAATATCTTCGGTGCTCCAAATCTTGTTCCTCCTCCCAAGAAAACGAAGAAGCATCGGAGCGACAGCGACGGAACACCGCGTAGATGGAATGATCACAACAGCCGCGGGCTCGCGGTGAACAGGCCGAAGGGACAGCACAGCGCGCCGCGAGGAGGACCGCCGAGATCGTGGACAAATAACGAACTTACGTTAGCTCTGCAGCATGTCTGGGAAAAGAAGCTCACCACGTCTCAGGCTAGTCGTTTGTTCGGCATTCCTTATAACAGTCTGCTGATGTACGTGCGCGGCAAATACGGGAAGAGTCTCAAGCTGGAACAACTGCGTAGGAATTGTACCGGCGCCAACACTCCCGAGATTATGAACAACAATAACATCAAGCCCGTCCAGCAGTCAGCGCAGATGAGCCACGCGCTCGCCAGCCTGTCGTTGCAGCATCCAGGTGACAACAGCGGCTTTGCCTCCCATCGCTCCCTGATCGGCGGCAACATGCCGCAGCCGCAAAGCTTCTACCCCGCCGAGTATGCCGCCGCGCCCTATCCCTTGGCGGTGAATATGGTGCATCTGTTACCTCCAAGTGAGCAGAAAACTTTCGAATCGTCCGCGAATTCAAGCGGCGACGGAAGTGGATGTCTAGGCGGTGGTGGAGACGGCAATGGTGGCGGCGATCTGACGAACTCGCAAACCAGCGAAACACCGTCGCCCATAGtcgatcatcatcatcatcatcaggagtcgtcgtcgtcgtcgtcgatgcAGCCGCAACCGACACAGTCGGCGCCCGCGTTGTTACAACAGAACGGGTCGGATTAG
- Protein Sequence
- MSSVGNSPDRMGVQSLYSLRWNNHQAHIQQFFQELLHEENLVDVTLICAESSVKAHKVVLSACSPFFQRIFAENPCKHPVIVLKDFSNHELSTLIDFMYGGEVKIAQEELPGLMRAAECLQVRGLSSSEPRLVSEEPRPSSSSSTLLEFTTPEDARHDTPEEDDNTLENTRDIKPTLFQQTRDHPTKPLIGHMNFGIRESCSSPLMPRRKQARPRRRSGELLPQDLSRRPTPPASLSPLPSILNLSGNQHQTQQQLQLQQSQYPQQQIISRNDQQQMINAQQSQQQQQQEDMAENLSMKKSMSPSGLDQHRVKTEDSEATSSPRGSPLTGTSLLHPDGSIQDIPTAVAAAVATVIPSISLSQTHPSEYLTSLNQLASQWLPGQSPLPPPPPQSHHSREDSPHGPGRSHPYQQQQQQESSIASRRTSMTMFTPLDGVTLGGGLFSHAGTYERTVLADSFLTDNFKQEALQNIFGAPNLVPPPKKTKKHRSDSDGTPRRWNDHNSRGLAVNRPKGQHSAPRGGPPRSWTNNELTLALQHVWEKKLTTSQASRLFGIPYNSLLMYVRGKYGKSLKLEQLRRNCTGANTPEIMNNNNIKPVQQSAQMSHALASLSLQHPGDNSGFASHRSLIGGNMPQPQSFYPAEYAAAPYPLAVNMVHLLPPSEQKTFESSANSSGDGSGCLGGGGDGNGGGDLTNSQTSETPSPIVDHHHHHQESSSSSSMQPQPTQSAPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00868979;
- 90% Identity
- iTF_00868979;
- 80% Identity
- iTF_00868979;