Lnig009974.1
Basic Information
- Insect
- Lasius niger
- Gene Symbol
- GATA2
- Assembly
- GCA_001045655.1
- Location
- LBMM01007750.1:69-8344[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-17 2e-13 49.7 3.8 1 35 326 359 326 360 0.97 2 2 9.7e-18 2.9e-14 52.4 7.4 1 35 388 421 388 422 0.97
Sequence Information
- Coding Sequence
- ATGCCTTATCCGGACAGTCATCACGAGACAGTACGAAGGGAGAATCAGGTCATCACCGTACAGATGCCCGATCATCGGCGAGCCCAGCACCAGGCACCCGGGCACCAGAGATTCAGTCCGCACGACAATCATCAGGCGTCCGCGAGATATCAGACGTCGCCGGTTCTCACCGCCACGACGGAAGATTACGACGCCACGGCGATCGTCACGCAACCGGGATCCACCGTTCATCTGGGATCGCCCGCGCCGCCATATTCGCCGCCCATGGACGGCATTCGCCCAGGTCAGCAGCAGCCGCAGCAGCATCTCGTGCCGACGAGCTACGCCGACGCCGGTGGTGTCGTCAAGTACGATCCGCCCGAGTCCGTGACCGCCGCGGAAACCATCAAGGGTTCGAACACGTACACAACCCTGGAGACGGTCGCCATTCCACCCGCGCAAACGGTTCAATACACGCAATATTTGTCGGCCAGCGAGACCTTCCAGCAGCCGTCGACCTACAGCTACATCAAAACACCGGGAGATCCTGTGATCCTGGCGTATCCGTCAACGCAAATCGGATCGAGAGCAACTGAgGTGGAATCACCCGGTAACTTCATGAAAGGTGATCCGACGTTGACGTCATCCTTGACCTCCGCCCGTGCGGTTCCACTGCATTACGATCAACCCGGTTCGCCGGGCTCCCAGGTGACCTTGTACAGCACAGGACCGACGTCGTATCAATACGTGAAGGCCCCCTCGAACGATCCTTACTGGCAGGCCGGTAGCACACCCTCGCCACCGACTTTGGAGTACGTCCCGAATTATCCGAGCATCGCCTCCATCTCCGTCGGCGACGCCAACATGCAGCTGTACTCCGGCGGCGGATACAGCGTCTCCGCAAGCGGAGGCGGACCACCCTCGGCGTGGGCCCTTCCGATTACCGGCACCGACGAGGCCTTCGACAGTGCCGTTATGGCGACGGAGCCTAAGGAATGCGCCAACTGCGGATCCAATATGACGCCGTTATGGAGACGAGACGGTACCGGCCATTACCTTTGCAATGCCTGCGGTCTCTACAGCAAGGTCAACGGGGTTAACAGACCGCCCATGAGATGCCCCAAACCGAAGCAGTCGGTCACGCCGGTAAACATTACCGGCGTACGGAGGACAGGAGTGCAATGTGCAAATTGCAGAACAAACAACACGACCCTTTGGAGACGAAATAACAATGGCGAGCCAGTCTGCAACGCGTGCGGCCTTTATTTCAAGCTGCATAATGTGAACAGGCCGTTGAGCATGAAGAAGGAGGGAATACAGACACGAAAGCGGAAACCAAAGAATCATTCGGGATCTATCGGTGGAAATCTACCTGGACCCAGTGGTATCCACAAGACTGAGATCAAGTCCAGCCTACTTGTGGACTCGTTGCAGTTGAACGCAATGTACGGAAGCGGGGGCGGGGGTGGTGGAGGGGTCGAAGAGCACTGTCTTCCTGTAGGTACACCAACCGGGGCGCAATTAGGGCACGCACACTCGCCCCTCGCATTACCCACCGCCGCCGTGTTGAATCGCCAAACCACCCTTACTGTGCCACCACTAGAACCAATCACTAGTCAGTCCAACAGTGACCTCGCCTCGGTTATAACGTCCACTACGGCGGCGCATGCCGAGAGATCGTAG
- Protein Sequence
- MPYPDSHHETVRRENQVITVQMPDHRRAQHQAPGHQRFSPHDNHQASARYQTSPVLTATTEDYDATAIVTQPGSTVHLGSPAPPYSPPMDGIRPGQQQPQQHLVPTSYADAGGVVKYDPPESVTAAETIKGSNTYTTLETVAIPPAQTVQYTQYLSASETFQQPSTYSYIKTPGDPVILAYPSTQIGSRATEVESPGNFMKGDPTLTSSLTSARAVPLHYDQPGSPGSQVTLYSTGPTSYQYVKAPSNDPYWQAGSTPSPPTLEYVPNYPSIASISVGDANMQLYSGGGYSVSASGGGPPSAWALPITGTDEAFDSAVMATEPKECANCGSNMTPLWRRDGTGHYLCNACGLYSKVNGVNRPPMRCPKPKQSVTPVNITGVRRTGVQCANCRTNNTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKEGIQTRKRKPKNHSGSIGGNLPGPSGIHKTEIKSSLLVDSLQLNAMYGSGGGGGGGVEEHCLPVGTPTGAQLGHAHSPLALPTAAVLNRQTTLTVPPLEPITSQSNSDLASVITSTTAAHAERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -