Lnig001712.1
Basic Information
- Insect
- Lasius niger
- Gene Symbol
- myt1
- Assembly
- GCA_001045655.1
- Location
- LBMM01006528.1:1-10016[-]
Transcription Factor Domain
- TF Family
- zf-C2HC
- Domain
- zf-C2HC domain
- PFAM
- PF01530
- TF Group
- Zinc-Coordinating Group
- Description
- This is a DNA binding zinc finger domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-18 5.6e-15 55.1 5.3 1 29 26 54 26 54 0.97 2 4 2.7e-19 1.2e-15 57.2 8.3 1 29 67 95 67 95 0.98 3 4 1.5e-17 6.6e-14 51.7 5.2 1 29 112 140 112 140 0.97 4 4 2.6e-18 1.2e-14 54.1 6.5 1 29 173 201 173 201 0.97
Sequence Information
- Coding Sequence
- ATGAATGTGAGGAGATACTCGTTGAATTTCGCACCTCGACCCACCCCTCGTGGTCGCGATGGCAAGGAGCTGATACAGTGTCCCACGTCGTCCTGTGATGGCATGGGTCATGTTTCAGGGAACTACGCTACCCACAGAAGCCTCTCCGGATGTCCACGAGCAGATCGCTCGCAAATCCAGGCGCATTCCCAGGAGCTCAAGTGTCCTACGCCAGGATGCGACGGTTCTGGACACGTCACAGGAAATTACTCGTCGCACAGAAGTTTATCCGGCTGTCCACGAGCCAATAAGCCGAAGAGTAAACCTCGAGATGGTCAAGATTCTGAACCTTTGAGATGTCCAATCCCGGGTTGCGACGGGTCCGGCCATGCCACCGGCAAATTCTTGTCGCACCGCAGTGCATCTGGATGCCCGATCGCGAATAGGAATAAGATGCGAGTACTGGAATCTGGCGGTACGGTCGAGCAGCACAAGGCAGCCGTGGCTGCCGCGACGGCGATGAAGTTCGAGGGTGTCAATTGTCCAACCCCCGGATGCGATGGACTCGGTCACATAAACGGATCTTTCCATAGCCATAGGTCCTTGTCGGGCTGCCCGATAGCCAGCCACGCCGTGAAGAAACCAAAACCGGAGGATAATATGAGCATGTACAGCAGAGGAATCACCGGGTTGGAAGCCGGTGGTCCGGCTCACGGGGGTGCGGTAGGCACGGGTCAGGGTAACTCGAGCGGTAGCGGGACCGCCGGTGCCGGGGGCGAGGATCTCTACACACTGGAAGCTGAGATCACGGAGCTCCAGAGAGAGAACGCCCGGGTCGAATCGCAAGTCTTGCGCTTGCGCTCGGATATCACCGCCATGGAGAATCAGCTCAAACACGGTGATAAGGAAACGTCAACGATAAGCCAACGCAACAACAATCTGACCGAATACTATCAGTCGCTGCGCGACAACATGATCACCCTGCTCGAGCAAGTGCGAATACCGAACGCCCCGGGCGGGCCGCAAGAGAAGATAGGCCACGAGAACTTCGACAGTTACCTGACGAAGCTACAGACTCTGTGCACCGCCGACGGCTACTGCGCCGACGAGAGCAACCGGCCGATTTACGAGACGGTGAAGACCGCATTGCAGGACTTCACGGTTCTGCCGACACCCATCTGA
- Protein Sequence
- MNVRRYSLNFAPRPTPRGRDGKELIQCPTSSCDGMGHVSGNYATHRSLSGCPRADRSQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKMRVLESGGTVEQHKAAVAAATAMKFEGVNCPTPGCDGLGHINGSFHSHRSLSGCPIASHAVKKPKPEDNMSMYSRGITGLEAGGPAHGGAVGTGQGNSSGSGTAGAGGEDLYTLEAEITELQRENARVESQVLRLRSDITAMENQLKHGDKETSTISQRNNNLTEYYQSLRDNMITLLEQVRIPNAPGGPQEKIGHENFDSYLTKLQTLCTADGYCADESNRPIYETVKTALQDFTVLPTPI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01418667;
- 90% Identity
- iTF_00280320;
- 80% Identity
- -