Basic Information

Insect: Lasius niger
Gene Symbol: ZFX
Assembly: GCA_001045655.1
Location: LBMM01001996.1:1-8915[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.3 1.4e+02 3.2 0.1 3 23 15 35 14 35 0.94

2 15 0.96 1e+02 3.6 3.8 1 23 980 1003 980 1003 0.81

3 15 0.00042 0.045 14.2 1.9 2 23 1100 1122 1099 1122 0.96

4 15 0.0085 0.91 10.1 0.1 2 23 1135 1156 1135 1156 0.98

5 15 1.4e-05 0.0015 18.9 2.3 2 23 1159 1180 1158 1180 0.97

6 15 0.0099 1.1 9.9 0.3 1 23 1186 1208 1186 1208 0.95

7 15 2.8e-05 0.003 17.9 4.4 2 23 1215 1236 1214 1237 0.95

8 15 0.087 9.3 6.9 3.7 5 23 1250 1268 1249 1268 0.97

9 15 1.8e-05 0.0019 18.6 1.5 3 23 1275 1296 1274 1296 0.97

10 15 0.008 0.86 10.2 0.3 2 23 1312 1332 1311 1332 0.97

11 15 5.3e-05 0.0057 17.0 0.7 1 20 1338 1357 1338 1360 0.92

12 15 6.6e-05 0.0071 16.7 2.7 1 23 1368 1390 1368 1390 0.99

13 15 0.0019 0.2 12.2 3.2 1 23 1396 1418 1396 1418 0.97

14 15 3.4e-06 0.00036 20.8 3.9 1 23 1424 1446 1424 1446 0.99

15 15 0.0012 0.12 12.8 6.3 1 23 1452 1474 1452 1475 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.3	1.4e+02	3.2	0.1	3	23	15	35	14	35	0.94
2	15	0.96	1e+02	3.6	3.8	1	23	980	1003	980	1003	0.81
3	15	0.00042	0.045	14.2	1.9	2	23	1100	1122	1099	1122	0.96
4	15	0.0085	0.91	10.1	0.1	2	23	1135	1156	1135	1156	0.98
5	15	1.4e-05	0.0015	18.9	2.3	2	23	1159	1180	1158	1180	0.97
6	15	0.0099	1.1	9.9	0.3	1	23	1186	1208	1186	1208	0.95
7	15	2.8e-05	0.003	17.9	4.4	2	23	1215	1236	1214	1237	0.95
8	15	0.087	9.3	6.9	3.7	5	23	1250	1268	1249	1268	0.97
9	15	1.8e-05	0.0019	18.6	1.5	3	23	1275	1296	1274	1296	0.97
10	15	0.008	0.86	10.2	0.3	2	23	1312	1332	1311	1332	0.97
11	15	5.3e-05	0.0057	17.0	0.7	1	20	1338	1357	1338	1360	0.92
12	15	6.6e-05	0.0071	16.7	2.7	1	23	1368	1390	1368	1390	0.99
13	15	0.0019	0.2	12.2	3.2	1	23	1396	1418	1396	1418	0.97
14	15	3.4e-06	0.00036	20.8	3.9	1	23	1424	1446	1424	1446	0.99
15	15	0.0012	0.12	12.8	6.3	1	23	1452	1474	1452	1475	0.96

Sequence Information

Coding Sequence: ATGGAGCTCAGCGGTGCGGGAACATCCGTCGGGGCCGTGGCCTGTCCCGTGTGTACCTTGTACCTGCGCGAGGGTATCAGTCTGCAGAAGCATCTGGACACTCATCCCAAGGAACAGGTTATAGATGCTCTCATCAAGGCTAGCGCCTCCTCGATTCAGACGCaccagcaacagcagcagcagcagcagcagcatcatCAACAACAGCAAACTCCTACCCCGGCACCAGCGGCAACGTCACCACCGGTATCGCTGCAACCTTCGCCGCAAGCTTCTCCGCAAGCTTCACCGCAAGCCCCTACCTCTATTCAGACGCCTCAAGCGTCGCCCCAAGTCTCGCAGAATTCAGCTCACATTTCCGCTCATTCGCCGTATCCCATAGGACCCATCTTCGAATGTCCGCCCATAAGTACTATGATGCCGCCGCAGTTTACCTCGTTCAGTTATCAACAATTTGTCAACAATGGGACCATGATGATACCGCAGTACGCGATGGCACCGCAGGCCAATCAGATGATGCAGATGCTGTACAATCCGTACGGTATGTACCAACAGCAGCAAATACCCACCGTCCAAATGATCTCACCGGTTGCAGCTATCCCGGGCGCCGCGAGGATCCGACCAGTGGTCACCATGGCCGGAGAGAACAATGTCAGAACCGCACTGGCAATTCCTGTAAATAGTCCCGAGCCGAAGCAGATCCTGCCTGAGATTTTGCCCGATGCCGAGCCTGAATCCGGGCAAGTTATGCCGGACGTGAACCTACCGGCCTCGCCTGTATTGCAGAACGAGGACGCGTCCATCAGACAGGAGGAGAGCGACAACACGGCGTTGTCGATCGATCACAGAGGACAGCAGATGCAGAGTACCGCATCGCCTGGTGAAAGTACAGTGCAGCACGGGTACAACGCTATTCCTAGGTCCATCACAATCGCCTGCGCCATGAATAATACCAACGACGATAAGGTGGAGAGTGTTCTACCGGACATGGAGGACGAGGAGCCGTCGAATAACATTTCGACCGTGGACTTGCAGTGTAAATCTGTAACGTACGAACAACCTGAGGCACAACAGTTTGCGCAACAGGTTTTGCAAGAAGGGTACGTGAGTATATCCAATAGGAAAACTAACGCAACGAATGATGTTGACTCTATGGCGTGCGAGCACGAATCGGAAGTGATGAGCGACGATAGACCGGCGAGCCGCGACAGCAGCAACGTCAGCAATAACGTTCCATCGCCGCGGGATCCAGTAGCGATAGACGCATTGAAAGACTCTATTCAACCCGAGCTTAATTCGGTGGAAAAGTTGGAGAATTTGATAACCATAATGGAGACGGAGCTTAATAACGCTTcgcttgaaaaagaaaatagcttGTCGAGTGAACGGGAGAGATTGATGGATACGAGGGAGAAATCGGATAGGGAGGAGACCGTGATTCACGACACCGTAGTGACAATTTTAGGCTCTCACGAGAAGGATCACATATTGCCTGATGTACAAGAGGATAACAATACATGGTGCCCGAACGATTATGTAGATAACGAACTCAGAACGCTAGAAAAGACCTGTCgttatttctcatataataCATGGTGCCCGAAAATAGATGACGGATTGAAAAGCCTAGAGAGacatttacatttgtataaGTATAAGCATAGTTTTTCAGCACCCCCGTCTCCTGTCACGACGAAGAAGTGCCGCAGGACCGCAGTGCGTCGTTACAGCGCGCGATCGGAGCTCGGATCGTGCGAAAATCTCAGCTCGTATCATCATCGTGCTGGCTTTGACGACGCCGCGGCCATgcaggacgaggacgaggacgaggacgatgacgacgacgaggatatggacgaggaggaagagaagcTCGACGAGGAGGATAATTTCGACGAGGCGGACATGGAGATCGAGGAGATTCCCAGTCCGCATACGCCTTTCGCGGAATGCGGCGTCAGATCGCATACGCCATTGTCCACGATCAGCGGTATCTCCGTGTTAAGAGTTAGGAAGGATCTCAGTAAACCATGTTCACCCACGTCCATACATTCGTTTCATCACGTGGACAGTGATAGCGTAAGTCACGACGAGGATAGTAATGgtgtagataataatattgtagataatattgcagaaaaaGATCCGATTGACTGTTCGCAAGTCGAAGAGAAGATTAAGACTGATCATCAGCATCAGGAGGCGCGCGCGACCGTgtgcgaaaatgtcgagaagGTTCAGGAATCGAGTAGTAGTAATAGTTATACATACCAGCAATCGGTGATAACCGAACACGTTAGTTCATTCCCTGTGATGCACTCGCAGCCATCCGTCTTGATGCACGAGTCGTATTCCGTGACGCCCAAGACGCAAAATCTCTTAAACTTGTCCGAGTCGATTAATCCTACAACCAGCACCGAGTCCAAGAGCTTTCATTCTACCAAATCTACGTTGATGCCGAAGCAATCGATGGAACTGCTCAACATAAATGAGGACGCTCACGCCGGACCGATGAACATGTTTGAATTTGACGGACTACAAATATTAGTTCCTAGTACATTTATAAGCGATTCGTCCCAGAAAGCGGTGAGTGCGACCAGCCAGCAATCTATGGCGAGTAGCGAGGGTGCAATAGGTATCGATGAGGAAGTGAAGAGCATCAATATGCGTGCCGATGAGACTATGCCGCCTAGAGGTGAATTGTCCGAACAAGAGAGCAACGGATGCACAGAGCCGTCTGCATGGCAGCTGTACATGGGTCAAGAATCTTCGCGCATGTCCACTTCCTACGATCTGTTGGCACGAGAAAGCTGGGAGGAATCGGAAGGATCTGACAACGAGATTAGCGGTCCGTTGTTGGATAGTAGATCGTTGGCCACGCACTTCACTTCGAGTCTGTTTCTGGACCGAGATCGGAAGACACCGACCAAACGGACGTTCAAGTGTTCCCACTGTAACGAGGTATTCGATTGTCCAAAAGAGCGCAGAGTTCATAGTACAACGGTACACAAGGATGCAGTGCCCAGTAGCAGCAGAGACCAATTGGATCAGCCGGAGATGAAGGATATCAAGTTGCTGGACAATCGCGTGAATGTGTTCGAAGATATATTCGTGCCTGCCGGTCTGCAACACATACAACAGATGCAACAGATGTTCCATAATCAACAGCCGCTCCTGCAGCCGCTCCTGCACCAGCTTCAGCCACCACCGTCGCAGCCTGGATCGGACGGTTTGACCAAGGCTGAGACAGATCAGAAGATTGGCGAGAATCTGGTGATACCGTCGAGCATCGAGGTGACCTGCGCGATATGCAGCCAACGATTTAGCAGCGAAAAATCTCTGCAGATACATCACCGACGTATGCATCTAGCTGAGGTGAACAAACGCATACGCGAGAACGCCAAGTGCCAGATATGCAACGAGGAGTTCCCGTCGGTGTTGTTGTTCAACGCCCATCTGAAAATACATCCGTTGGAATGCGGACAGTGCGGTAAGTATTTTTATCGGAAGCAAAACTTCAAGCTGCATATGAAGCGGCACTTGGGCATCAAACCGTTTCCGTGCACGGTATGCGACAAGGCGTTCCTCACCAAGCAAAAACTGGACGAACATACCAACGGCCACACCGGCAACGCGCCCGTCAAATGTAGCTTGTGCAACGAGACTTTCCGCAGATATTCGAATTTGACGCAGCACAAGAATCGGCATCACCTCAACATCAAGAAGAAACTCAAAGACTATATATGCCACTGCGGCGAGGTGTTTCACACGAAGAAGAAGCTCGCCTGGCACAAGGAGACGCACGACGAGAAGCCCAAGGCGTGCACGTATTGCAACGAGCGATTCATCCACATGGCCAGTTTGACGCGTCATATGCGTCGCGCCCACAATCGCCGATTCGTTCCTGATGCGCAGCGCGAAAGCGAGAACGTCGAGTGTCCTATTTGCAAGTGTATCTATCTACGATCGTCGCTGGCGGTGCACATGCGCGTGCACAACGGCGAACGGCCGTACGAGTGTCAGGTCTGCTCCAAGGCATTCAGCACCAAGTGGAATCTGCAGTTGCACAAGTGGACGCATGCGGCACGCAGCACTAAGCCGTTCAAGTGTAATCAGTGCAGCGCGGCCTTTTATCGTCACAGCGACTACACGGCGCATATGAATTCCCACCGTAACGTGCGTCCTTACACGTGCAACTATTGCGGCGCGCAATTCATCCGCAAGTACAACTGTCTGCGACACGTGAAGGAGCACGAGGAGAACAAGGCGTACACGTGCGACGTATGCAACAAGACCTTCCATCGCTCGTACTATCTCAAGGAGCATCTGCGGGTGCACTCGGGCGCGCGACCGTACACGTGTCACATCTGCGGCAAGTCCAGCGGCACCAAGTCCAATCACAACAAGCACGTGCGAATCCATCACGCGCGCGAGCCTGTAAATACCGAGAATTAA
Protein Sequence: MELSGAGTSVGAVACPVCTLYLREGISLQKHLDTHPKEQVIDALIKASASSIQTHQQQQQQQQQHHQQQQTPTPAPAATSPPVSLQPSPQASPQASPQAPTSIQTPQASPQVSQNSAHISAHSPYPIGPIFECPPISTMMPPQFTSFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPTVQMISPVAAIPGAARIRPVVTMAGENNVRTALAIPVNSPEPKQILPEILPDAEPESGQVMPDVNLPASPVLQNEDASIRQEESDNTALSIDHRGQQMQSTASPGESTVQHGYNAIPRSITIACAMNNTNDDKVESVLPDMEDEEPSNNISTVDLQCKSVTYEQPEAQQFAQQVLQEGYVSISNRKTNATNDVDSMACEHESEVMSDDRPASRDSSNVSNNVPSPRDPVAIDALKDSIQPELNSVEKLENLITIMETELNNASLEKENSLSSERERLMDTREKSDREETVIHDTVVTILGSHEKDHILPDVQEDNNTWCPNDYVDNELRTLEKTCRYFSYNTWCPKIDDGLKSLERHLHLYKYKHSFSAPPSPVTTKKCRRTAVRRYSARSELGSCENLSSYHHRAGFDDAAAMQDEDEDEDDDDDEDMDEEEEKLDEEDNFDEADMEIEEIPSPHTPFAECGVRSHTPLSTISGISVLRVRKDLSKPCSPTSIHSFHHVDSDSVSHDEDSNGVDNNIVDNIAEKDPIDCSQVEEKIKTDHQHQEARATVCENVEKVQESSSSNSYTYQQSVITEHVSSFPVMHSQPSVLMHESYSVTPKTQNLLNLSESINPTTSTESKSFHSTKSTLMPKQSMELLNINEDAHAGPMNMFEFDGLQILVPSTFISDSSQKAVSATSQQSMASSEGAIGIDEEVKSINMRADETMPPRGELSEQESNGCTEPSAWQLYMGQESSRMSTSYDLLARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCNEVFDCPKERRVHSTTVHKDAVPSSSRDQLDQPEMKDIKLLDNRVNVFEDIFVPAGLQHIQQMQQMFHNQQPLLQPLLHQLQPPPSQPGSDGLTKAETDQKIGENLVIPSSIEVTCAICSQRFSSEKSLQIHHRRMHLAEVNKRIRENAKCQICNEEFPSVLLFNAHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCSLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01255007;
90% Identity: iTF_00280132;
80% Identity: -