Lnig011024.1
Basic Information
- Insect
- Lasius niger
- Gene Symbol
- Trerf1
- Assembly
- GCA_001045655.1
- Location
- LBMM01006238.1:609-9246[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 2.6e+03 -1.4 0.1 29 42 596 609 588 611 0.89 2 2 2.1e-10 2.9e-07 30.5 0.0 2 46 762 806 761 806 0.96
Sequence Information
- Coding Sequence
- atgtacgatCTAGCAGCGGACGCGAATGTCAATCAACAACCTCGTACGAATGCCACCGTCTTCACCACGCAAGCCGACGCCGTCTCGCAGATCGCCGGCAAGACGAGCTTTGCGGTGCCAGCACCGCCGCCCTTGGCGACAGGGGAGAAAGTGCGTCGGCTCTCCGATGGTGAACACTTCCGACAGCCCAATGTCACCGTGAGCGGTCACGCAACCGTGCAGAAGCAGCTGCAGGAAGCGCAAACTCAGGCTCAAGCGCAAGCGCTTGCCGACCTGATCCTGAAGGGGGCGAAGGTGGCCGTGAAGAGAACAACCTCCGATCCGGGACAAAGATTACATCTAACTTATCAGCAGCCCGTGCAATCAGCGACGACCAATCAACAGCCGAATAATCAGCAACCGCAGGCACAACCTGCGGTAACGGAAAGCTTCACAATGACAGGTTACGCCGAGGATGGTGGTTACTTCAGTCCGAGTCTGCAGGATGAAGTGTTTCAGCAAGTCACAACGGTCCCTGACAGCGTGCTTTTGCATGCTACGCAGTTGGACTCGATTCAGTTTCAGACGGCCAGCCTATTGCAAGAACAATCTACCGAACAGCTGCAGGATATCACGTTAGAAGATCGATACTCGTCGCAACACACAGTCAATCCGGACCTACAAGCGTTGGTGAATTCGCCGTTGCCCGACTCACTGGCCGAATTCAGTACTTACGCCGCGCAATACACGGAGAGCCCTCATACATTGCCGACCCAGTCGCCCTTGCCATCGCCCTTGACGCGACACGACAGTCCGAGCTTCACGTATCCCACCCCACCAGCCAGCCAGGAAGGCCTGCTTACCGGGAGTCTGCCGTTGCTGAGTCCCCAGGAGGATCCGGAGAGTGTGAGACAAGTGTCGTCACCGCTCTCGGCGGCGTTTTACACCACCACAATGTCATCCGCCGCGGCTGTGGAGGAGGCGCTGAACGAGGTGTTGCCGGGCGAATCCGAGGCGGACGCGGACCTCTACGGGTCCGGCTCGCCGAATCCGCACTCGCCACTGCCAAGCCCGTTGTCGGCGACACCGGCGCCGTCGCCGCTGTCCTCGCTACCGCCGTCCTCCGTCTCGTCGCCGGGACCGGTCGCCTTCACCGGCACGAGCTTTCCCGTATCGCCGCATCACGCGCTCCAAAGCCAAATGATGCCGAACTCGGAGGATCCGCTGTTGTCTTCGACTCCGAAGGACTTCACCGCCTCCGGTCGCAGGCGATTCGAGTTTCAATCATATAAACTTATCACGAGCCAGAATCTCGTGGACTTTGGCCTAGGAAACGGCAGTTTGGCTGGCATTGTCGTCGACAACAACGGCGAATTCAAGCTGATACAGACGGCGGGTCTGCAGAAAGCGAATGTACTAGTGCAGGCGGGTTCGCTAAGTCCGGCATTGACGTTCAAGAAGGAGATTCGTCTGGCAACGCCGAAAGTCGAGCCTGTAACCGTGAATCTCGGCTTGAACGTCCAGACAACGAATCAGCAGCATTGCAACGCGGGAGGACAATTTAATCAACAGCAAGTCGTCAACCCGGCCAAGTTCCTCATTCAAACTAATCACGCGACAAAGAACAATATTTTGAGACACAAATTGGCTACTGGAAATTTACCGATACCCATCGAACAAATCAAGGAGGAACTGCTGGACGAGGATGTATTTCTCAGTCCTGGCAGTTTACCCGCCGGTAGTCCCGTACGGCATTGTCGGAAGAGGCCGCGCATGGACGGCGGTCAATATGCCCACAGTTCGCACTCTTATCCATCGCGGCTGCGGAAGGCTTGCGATCGCCACTGGGACAGCAGTTATACGCCACCACCGATTCTGGACCCATCTCGTCCTGGTCCAGGGTTGTATGCAAGATTACACCAGCACGAGAGAGACTCGGACTTCAGTTCAGATGACTCTCAAGGAAACGACGGTCCGCCGGGAAGAATCAACATCGGCACGAGATATCAGGCTACGATACCGCCGGTCGAGTGTAACGGGGACAGGAGAAAGGACGGATCGGAGGCCGACCACCTTCTGTGGGATCCCGGTATAAACAACGTGCTCACGAGCACCGAGCTGGAGATGTACCTGCAATTCGCGTGTTGCGCCGCGGTGCCGGGCGGTGGTAGAAACAAGGAGTACGCGCTTCACCTGTTGCATATGTGCAAGGGAAATATTcatgAAGCGATGGTGAAATTAATGCGGCCAACACCTACGCTACCAGTGGAGCATCCGCTACTCAGCTACGAGTGCCACGAATCCGATAGATGGACGTCTCATGAAATGGACGCGTTCTATCAGGGACTGCTCAAGTACAACAAGGACTTTTCCGCGATTTCACGGGACGTCGGTGCCAAGACCGCGAAACAGTGCGTGCAGTTCTACTACCTCTGGAAGAGACTCTGCCCCGACGAATACAAAAGATTGCGTATTCGTCACGGAAAACCAAAGATCAAGAGTGAGAAAGATTGCAAGGACACCAGGGAACTTCGCGACGCCATCGCGTCCGTGACGGAAATGGACTTTGGTGAAGAGAAATCGATCCTACATCGTACCCTGCTACAaacaaacgagagagaaaattcggCAACTCTGACTACCAGCGAAGGAGAATTAAGGTTATTCGCATACGACTGCCCAGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAATCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGCGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGTGCGCACATGAAATCCCACAGGCCAATACCCTTGCCCGATTCAACGGGTCAGGAATCTAAACGACCGGCACAACAGTCATTGAAAGCAATGCAACAACTGCAACAATCAATGCCATTGCAGCAAAAccaacagcaacaacaacaacagtcAGACAATGCTACGCCGCAAATGCAAGATCATCAGCAGCAACTGCCTGCGAGTATCAGTGACAACAGCGCCCAAAATACAGCACACTTGTGCCGTAATCCGACGAGGCCCCCATAG
- Protein Sequence
- MYDLAADANVNQQPRTNATVFTTQADAVSQIAGKTSFAVPAPPPLATGEKVRRLSDGEHFRQPNVTVSGHATVQKQLQEAQTQAQAQALADLILKGAKVAVKRTTSDPGQRLHLTYQQPVQSATTNQQPNNQQPQAQPAVTESFTMTGYAEDGGYFSPSLQDEVFQQVTTVPDSVLLHATQLDSIQFQTASLLQEQSTEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFSTYAAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPESVRQVSSPLSAAFYTTTMSSAAAVEEALNEVLPGESEADADLYGSGSPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPVAFTGTSFPVSPHHALQSQMMPNSEDPLLSSTPKDFTASGRRRFEFQSYKLITSQNLVDFGLGNGSLAGIVVDNNGEFKLIQTAGLQKANVLVQAGSLSPALTFKKEIRLATPKVEPVTVNLGLNVQTTNQQHCNAGGQFNQQQVVNPAKFLIQTNHATKNNILRHKLATGNLPIPIEQIKEELLDEDVFLSPGSLPAGSPVRHCRKRPRMDGGQYAHSSHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQHERDSDFSSDDSQGNDGPPGRINIGTRYQATIPPVECNGDRRKDGSEADHLLWDPGINNVLTSTELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMVKLMRPTPTLPVEHPLLSYECHESDRWTSHEMDAFYQGLLKYNKDFSAISRDVGAKTAKQCVQFYYLWKRLCPDEYKRLRIRHGKPKIKSEKDCKDTRELRDAIASVTEMDFGEEKSILHRTLLQTNERENSATLTTSEGELRLFAYDCPDSFSGSVTVTMAGSTQTAQIGNTGHATVNTNSQTHTSSEQQLPAPTPLHYPCKICGKVFNKVKSRSAHMKSHRPIPLPDSTGQESKRPAQQSLKAMQQLQQSMPLQQNQQQQQQQSDNATPQMQDHQQQLPASISDNSAQNTAHLCRNPTRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01068231;
- 90% Identity
- iTF_01407212;
- 80% Identity
- -