Lnig006936.1
Basic Information
- Insect
- Lasius niger
- Gene Symbol
- dnajc2
- Assembly
- GCA_001045655.1
- Location
- LBMM01001893.1:1077-4490[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-05 0.077 13.1 0.0 3 34 442 477 440 483 0.85 2 2 4e-13 5.4e-10 39.2 0.0 3 44 560 605 559 607 0.92
Sequence Information
- Coding Sequence
- ATGACGGATGGCACCGGGAACGAGGACTCTGCCGTTTTTAACTGCATATCCGATTCGGGTAAGGCAAATGCCAGTACAGCGGGTCCTGTAGTTTTGTATTCAACGGCACAAGCATGGCGAGCCCAATTCTATCGCAGTCTCAACCGCACCAGTTTTTCGGAATCATCGGACGAAGAGGACGATCTGTCTCAATATCAATTCGAAGACGATCTCGAGTATCTCAGGTCTCTTGATCCGAGAGACTGGAAGGATCAGGATCATTATGCTGTTCTAGGATTGAAAAATCTTAGGCACAGAGCGAcggaagatattattaaaagagctTataaacaaaaaatattaaaacaccATCCTGATAAACGCAAGGCTATGGGCGAGGAGATCCGACCAGACGACGACTACTTCACATGTATAACTCGCGCCTGGGAGACCCTCGGGAGTCAAGCGAAGAGGCGAAGCTATGACAGTGTGGATCCTTACTTTAACGACAATTTGCCGGACGAGAAAGACTGTCGAAACAATTTCTACGAACTACTGGGTAAAGCCTTCAAAGAGAACTCACGGTGGTCCGTAAAGAAGCCGGTGCCACATTTGGGCGGGCCATTCACGCAGCGAGAAAAAGTAGaggaattttattcgttttggTACGACTTCGATTCCTGGCGCGAATACTCGTATCTCGATGAAGAAGACAAGGAGAGTGGTCAAGAtcGGGACATGCGCAAATGGATCGAGAAGAAGAACAAAGCCACGAGAgcgaaacgaaaaaaagaagagatgaCACGAATACGAACTTTAGTGGATATGGCTTACAATATAGATCCTAGAATAAAGAAGTTCCAGCAAGACGATAAGGATAAAAAGAACGCCGCAAAGAGAGCGAAGCAGGAAGCGGCAAAGGCCAGGCAgcaggaggaagagagaatagCCCGGGACGCGGCGGAAAAGGAAAGATtggagaaggagaaaagggAATCTGAAGAGAGGGCAAGACAGGAGGCGCTGAAACAGAAACGGGAGATGCAGAAAAAAGCATTGCGCAAGGAAAGAAAAGCGCTCAGAGATTTCTGCAAAGCGAACAATTACTTCGCTCAAAATTCGACGGAGAGTCTCCGGCATATGGAAAGCGTGGAGAAGATTTGCGAACTGTTTAAGCTGGTGCAGCTGGAGGAAGCGATGAAGAAATTGCAGAGCGACGGCAGGAATGCGTTTCTAAGCATCATCGAAGAGGCGGAGCGGAGAATCGAGGCGGAACGCCGTGTGAATGTGATCAATAACGATGCTAGAAACATGCCCGAGAAACAGACCAAGACCTGCACCGCGCCCTGGAGCGAGAACGACTTGCAACTCTTGATAAAAGCGGTCAATCTGTTCCCCGCCGGGACCAATCAACGTTGGGAAGTGGtcgcgaattttattaatcaacatAGTGGTTCTACTAGCGGAGTTACTCGCGACGCCAAGGAGGTCCTGGCAAAAGCCAAGAGTCTGCAATCGACCGACTTTAGCAAATCGAGTTTGAAGGAGCAAGCCAATAAAAAGGCCTTCGACAATTTTATCGCCGAGAAAAAGAGCAAGGATGTCGAGGAGAGAATGCCGGCCGTTACGGAACGCTTGGATCATCCAATCGCGAACGGTGTCGTCGCTGAAcctaaagaaacaaaaaaggaTTGGACACCGTGGACTCCGGGCGAACAGAAACTTCTTGAGCAAGCTCTGAAAACCTATCCTACCACAGTCTCGGACAGATGGGACCAGATCGCTGCTTGTATACCGACCAGAACGAAAAAGGAGTGCATGAGAAGATACAAAGAACTGGTCGAGCTCGTGAAAGCGAAGAAGGCGGCGCAGatggcaaaataa
- Protein Sequence
- MTDGTGNEDSAVFNCISDSGKANASTAGPVVLYSTAQAWRAQFYRSLNRTSFSESSDEEDDLSQYQFEDDLEYLRSLDPRDWKDQDHYAVLGLKNLRHRATEDIIKRAYKQKILKHHPDKRKAMGEEIRPDDDYFTCITRAWETLGSQAKRRSYDSVDPYFNDNLPDEKDCRNNFYELLGKAFKENSRWSVKKPVPHLGGPFTQREKVEEFYSFWYDFDSWREYSYLDEEDKESGQDRDMRKWIEKKNKATRAKRKKEEMTRIRTLVDMAYNIDPRIKKFQQDDKDKKNAAKRAKQEAAKARQQEEERIARDAAEKERLEKEKRESEERARQEALKQKREMQKKALRKERKALRDFCKANNYFAQNSTESLRHMESVEKICELFKLVQLEEAMKKLQSDGRNAFLSIIEEAERRIEAERRVNVINNDARNMPEKQTKTCTAPWSENDLQLLIKAVNLFPAGTNQRWEVVANFINQHSGSTSGVTRDAKEVLAKAKSLQSTDFSKSSLKEQANKKAFDNFIAEKKSKDVEERMPAVTERLDHPIANGVVAEPKETKKDWTPWTPGEQKLLEQALKTYPTTVSDRWDQIAACIPTRTKKECMRRYKELVELVKAKKAAQMAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733895;
- 90% Identity
- iTF_00128132;
- 80% Identity
- iTF_00868712;