Lnig006693.1
Basic Information
- Insect
- Lasius niger
- Gene Symbol
- -
- Assembly
- GCA_001045655.1
- Location
- LBMM01012360.1:849-4524[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.063 87 3.4 0.0 14 46 217 254 213 254 0.75 2 5 3.9e-11 5.4e-08 32.8 0.3 1 45 260 306 260 307 0.96 3 5 1.2e-09 1.6e-06 28.1 0.4 3 44 315 360 313 362 0.96 4 5 4.8e-09 6.7e-06 26.1 0.0 1 45 368 413 368 414 0.94 5 5 1.5e-12 2.1e-09 37.4 0.2 3 42 422 461 420 463 0.96
Sequence Information
- Coding Sequence
- ATGAGCGAGTCCGACGATTCTGACATTCAGGCTGACATTCAGGCTCTGACCGAAGCTCTGTCCTTGCCTACAACCAGCGATTCGCAGCAACAGTTTGCCTCTAGCCATTCGCGATCTGACAGCACTCCCTCAATAGATTTTGAGAGGAGTGACAATGactatcttaaatatatcgatgTGAATCAGGACACTGAGTCTCTGGACGCTTATGACATGAATGCACAATTGATCACAGGTCTGTTGATGGCCAAGAACAAATTGATGGCTTTGCTACAGGAGTGCGAGAGGAAGATAAAGGAATTGGACGAAAAGATGAACTCTAGCGAAGGATCCAGTTTACGTACCACTAGTAGATTTACTATCACCAATGCCGGCATGCCATATTTCAAGGATAAGAATCACTTTAGGGCACCCAAGAACTACGACACAAAGCTGAAGGAGTCTCGGGGCGAGTTATTTCTGCCGTTTCTTAGGAAGCCGAGTCGTTGGTCGGGAAGAGACTGGGAACTACTTCTAAGAGCCATACACAACGAAGCCATCGAGTCGGTACTCTCCGAAGGATTTATCGATGATATCGATAAACAGCCTGATAAAGAAACATCTAACGATCAAGCTAAGACCGCATTAGTGCTGCCTAGAAATTTCAGGGAAATGGTGGGAGCGATCGGCGAGAAGGAGTTCGACTGGCACAAAATTTCCAGAATGGATTTCGAGGATAAGCATTCACCAGGCGAGTGCCAAGCCATGTGGAACACTTATCTGCATCCCGACTTCAATAAGAACGAATGGACAAGTGTGGAGGACAAGAGACTGTTGAGATATGCCAGAGAATGTAAATGTCAAGATTGGGACACCATTACGCAGTTATTGGGGACAAGTCGTAGCGCTTATCAATGCTTCATCAGGTACAACACCATCAAGAAGGCGCCGTTCTCGGGACTTGCTTGGGCCAAGGAGGAGGATAAATGTCTCGTGAAAGTCATAAGCGAACTCAGGATCGGAGATTACATTCCCTGGACAGACATTGCCAATCATATGCGGCATAAGACCAAGCAGCAGGTCTACACCAGGTGGATGTACAGGAAGGCGCCGCATTTGAGGAAGGGCAGATTCACTTATGTGGAAACGAAAACGCTCATGAACGCGGTGGAGAAATACGGCACGGACTTCTGTAAGATCTCAAACGTCGTGATGCCATATCGGACCTCTATACAACTCAACGAACGTTACCAGACGGTGATGACAGCCACGAACGGCGACAATATGTGGACGCTCAACGATGACGAGAGGCTGCTTCAACTGCATCGGAGGCATAATAACGATTGGTCCAGGATAGCCACGTTTTTTTCCAACAAATCGAGAACGCAAGTGAGACATCGATTTAAGGCGATAGAGAGATACTTGAGGAAAAATGTCTCCCTTAAAGATATACCTAGACCATCTACTTCATCTAAAAAGAATGACAAAGTTTCAACACCTAcgaatacattaataatagagATGCTGAATAATAGAGATGCATCGGTTGCAGAACGTCCCGTTATACACATTGATGATATTCGGCTAAGACTGTACGAATTTATTAGTTTACCTCCTTCAAAGACTatcaattctaaaaaaatttatgattcgAAACAGCTCGTGTACGATACTAGAAGATTGTACGATATGTTGAACGTATTAAACGCCAATCTTGATCTTTCAAGTTCTTTTCTGAATTATACAGTTCTAAATAGGAGGGAGAAACAACTTTTGGTCTCTCTGGAAGAATACATTAATGTAAGGAATAGTGAAAAACAGAATCACGAACAAATAGAAAAGTTCAGAATGCAAATGTTTGGTCGTGTTAGCGAAAAAGTTAACGAAAGTTCTTTTATACCACCACTACCTTCCGTTGGATATGTAAGGACAAAGAAGGGAAAGAGTAATAATGTACATAGCGTGTACAATAATCAGTCTATAGATTGTGAGCTGATAGatgtcaatgaaaaatttcttatcgaCGTGCCTACAGAATTCTCCACGACTCCCTATATAGATTCTTTCGTTAGTGTCGAGGAAGAGATTCAATTTCACAAATTCAGTCGATTGTTAATAAGCGATTATCACAAATGCGATGAGCGACATGtaaatttacacaaattattaaaatgcaatctcTCTTTTGATAAAGCGGGCGCTTCatcaaaatatcataatagtACAGATGTGGATtcgaaattaacaaaaaaccAGAAAAAACGCtcgaaaaaattgcaaacattTATAAGCACCGAACATACAAAGGAAGAAgatgatgaagaaaatatatttggtgATATAATTGCGCCAAACCGAGCAACTTTATTAGGTATCAAGAATTTGCTTCTTTGGAAATTGTTGTATGATTGTCAACATAATTCTGAACATTGCGAATTATTGCTCAAAAGTGAACAACAAGAAACGACGACAAACTGTCCTATACAAACGGAAAGCGTCGAATATCGATTGCTGCAAACTCGTCtgttgcaattatttaaacttcCCATAGGTTTATCAAACACCATATTGGAACTATGTGGACCGGAgcctatatttttaacaaaaaaggaAGACAATCAGACACCCGTtttgagaagaaagagaaaatttgaaaatgtcgAAGCTGCAGATCCTCCCGTAGTACGCAATTGCAAGGtagtttataacaaatataaaattatcgcaaaataa
- Protein Sequence
- MSESDDSDIQADIQALTEALSLPTTSDSQQQFASSHSRSDSTPSIDFERSDNDYLKYIDVNQDTESLDAYDMNAQLITGLLMAKNKLMALLQECERKIKELDEKMNSSEGSSLRTTSRFTITNAGMPYFKDKNHFRAPKNYDTKLKESRGELFLPFLRKPSRWSGRDWELLLRAIHNEAIESVLSEGFIDDIDKQPDKETSNDQAKTALVLPRNFREMVGAIGEKEFDWHKISRMDFEDKHSPGECQAMWNTYLHPDFNKNEWTSVEDKRLLRYARECKCQDWDTITQLLGTSRSAYQCFIRYNTIKKAPFSGLAWAKEEDKCLVKVISELRIGDYIPWTDIANHMRHKTKQQVYTRWMYRKAPHLRKGRFTYVETKTLMNAVEKYGTDFCKISNVVMPYRTSIQLNERYQTVMTATNGDNMWTLNDDERLLQLHRRHNNDWSRIATFFSNKSRTQVRHRFKAIERYLRKNVSLKDIPRPSTSSKKNDKVSTPTNTLIIEMLNNRDASVAERPVIHIDDIRLRLYEFISLPPSKTINSKKIYDSKQLVYDTRRLYDMLNVLNANLDLSSSFLNYTVLNRREKQLLVSLEEYINVRNSEKQNHEQIEKFRMQMFGRVSEKVNESSFIPPLPSVGYVRTKKGKSNNVHSVYNNQSIDCELIDVNEKFLIDVPTEFSTTPYIDSFVSVEEEIQFHKFSRLLISDYHKCDERHVNLHKLLKCNLSFDKAGASSKYHNSTDVDSKLTKNQKKRSKKLQTFISTEHTKEEDDEENIFGDIIAPNRATLLGIKNLLLWKLLYDCQHNSEHCELLLKSEQQETTTNCPIQTESVEYRLLQTRLLQLFKLPIGLSNTILELCGPEPIFLTKKEDNQTPVLRRKRKFENVEAADPPVVRNCKVVYNKYKIIAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00868708;
- 90% Identity
- iTF_00867324;
- 80% Identity
- -