Basic Information

Insect: Lasius niger
Gene Symbol: ct
Assembly: GCA_001045655.1
Location: LBMM01000336.1:3315-24927[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.6e-28 5e-24 84.1 0.0 2 72 445 516 444 521 0.95

2 3 9.7e-33 8.7e-29 99.4 0.0 2 77 854 930 853 932 0.96

3 3 5.4e-31 4.8e-27 93.8 0.0 3 75 1086 1159 1084 1163 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.6e-28	5e-24	84.1	2	72	445	516	444	521	0.95
2	3	9.7e-33	8.7e-29	99.4	2	77	854	930	853	932	0.96
3	3	5.4e-31	4.8e-27	93.8	3	75	1086	1159	1084	1163	0.95

Sequence Information

Coding Sequence: ATTAACCAGTTGGTCGAGGAGGTGTCCAGGCTACAGCAGAGTCTGCAACGCCTTCAGGAGACAAGTGCGCAAGCAACGGCGCGGCTCGAGGAGGAACTCGAAGTGCGCAGGCAGCACATCAGCAGACTGGAGAGCAAATTGGAACGGCAGAGGGATTATGATGACCTGAAGCGCGAAATAAGCGTGCTGAGGTCAGTCGACCTCTCGCAGATACCAACCGGCGAACCTGGAAAGAGCTTGGAGCATCTTCTTATGGAGCGCTTCAAGGCGCTTCAGCAAGCCGAGAACCTGAAACCCTCCAACACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTACCACCTACATCCCATGTGTCCTCCCAACAACCACCGCCACCACCTCCGACAGCAGTCTCTCTCCCTCCACGTTCCACCCCGACGCCCTCTTCGGCCACTTCGACGACTTCGAGCCTCCTTTTCCCGCCACCCCTCCAGAACGTCGAGACCTTCGGCTCGTTCCTCGGTGAAGAAATCGTTGCCAATTGGAGGCGGACGTTGGAAAGGTCTATCATGAgtcaacagcagcagcagcagcaacaacagcagcagcagcagcaacaacaacaacaacaacagcagcagcagcagccgcaaTCACAGCCATCTCAATTAAGTCAGTTAGCTCAACAGCAACAACAGTTGCAACAAGCTCAGCCGCACATGGGTTTGCATCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCACCGGGCGCGGATCCGTCGTCCACCTCGAATACCCCGGCAAAGTCGAATACGCCGATCGGTACGGTGTCCCTGGGCAATTTAGATGTCACCGAAAAGGCGCCAACGCCGGTATCGGGACACGAGACGCCGGCACCACCGACGCCATCCTCCACAACCGCCTTAACATCGCCGCCGAGCTTCCAGCCACCGACGTCGCTGGTGGAGACCAGCACCTCTTCGGCATCCATCAACGGCGGCGGTCTCACACCCGGCGTCCCGAGCGCACCGCCCCCGAAGAGCCCGGCCGATCAAGAATCATGTCAcaataacaacaacaacagccATCATCTGGCGAACAATAACATCGGCGGCCTAAGCGTCCTCGAAACGCTCAAGAGTCCGTTTCGGTTCGACGATCGAACATATCCGTTCCGATTCGGCGACGAGTTTGGCGCCGCCGGTATGGCCGGTCGGCTGGGCGAATCCCTCATTCCAAAGGGCGATCCCATGGAGGCGAGGCTCCAGGAGATGTTGCGCCACAATATGGACAAGTACGCCTCGCAAAATCTCGATACTCTTCACATAGCGAGGCGGGTGCGCGAGCTGTTGTCGATACACAATATCGGTCAGAGGCTGTTCGCCAAGTATGTTCTCGGACTAAGCCAAGGCACGGTCAGCGAGTTACTTAGCAAGCCCAAGCCCTGGGACAAGCTGACCGAGAAGGGCCGCGACAGCTATCGGAAGATGCATGGCTGGGCTTGCGACGAGAACGCCGTATTGCTGCTCAAGTCCTTGATCCCAAAGAAGGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCATTCGCACGTGGACCACAGGATGGTGGTCCGCCGGAAATGAATGACGAAAGATTGGCGCATATTCTCTCGGAATCGAGCCATATGCAAATGAGAGGCGAGCATGAGGTATCGAACGACGCAGATAGCAAGAGTCCGAATAGGATCGGTTGTCCGAGTCCGTTTAACAAGGACAGACTGGACAGCCAAAACAGGAGACTGAAGAAGTACGAGAACGATGACATTCCCCAGGAGAAGGTGGTGAGAATTTACCAGGAGGAGCTGGCTAAACTGATGGGCAGGAGAGTGGAGGATATTCGTCCGCGAGAGTTTTCTAGTGCGatttttccacattttttcAGTGGCACTCAAGGCGGTCTTCAAGGTATCGAGCGCACTCAGGAAGACATTCGGATGGCATTGGACGCTTATCATCGTGAGCTTCAAAAATTGAACGCTGCGCCGGGTCAAAATCCTTCGATGGCCGGATTGCCAGGACTACCTGGACTTCCGGGCTTGCTGGCGCTCCAGCAGCAAGCTCTTCAGCAACATCACTTAGCCGCGAATGGCGGCGGTGGCGCTGTTCAGGATTTGAGTTTAGGCAAAGTGGATCCGcgcaataaaatgataaacggCGTAtcggaggaagagaaagaaaagatggAGGAGGCGATGAGACATGCCGGTAGCGCTTTTTCCCTGGTGAGGCCGAAGCAAGAATCGACGGGTCCTCAATCAACACCCGGCGGTTCCAGCGCGAGTTCTCCCTTGGGCAATTCCATACTTCCCCCTGCGATGACACCCAACGAGGAGTTCGCCAGTGCGGCGGCAGCCAGCCCCTTGCAGAGGATGGCCTCCATCACAAATAGTCTGATAAGTCAACCGTCCACACCAACCCATCACTCGGCCAATCAAAGGCCTTTAAAAGCTGTGCTTCCTCCGATTACGCAGCAGCAGTTCGACATGTACAATAATCTTAACACCGAAGATATCGTGAAAAGGGTGAAAGAACAGTTGTCGCAATATTCGATTTCGCAGCGGCTATTCGGCGAGTCGGTATTGGGTCTGTCTCAGGGATCAGTGTCGGATCTCCTCGCACGTCCTAAACCATGGCACATGCTGACTCAAAAAGGTCGCGAGCCCTTCATTCGAATGAAGATGTTTCTTGAGGACGACAACGCAGTACACAAACTGGTCGCAAGCCAGTACAAGATCGCTCCAGAGAAGCTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGTGGAACACCCATGAAACCTATGCCGCCGACGAAACTCGTGCAAGAACAACTACAAAATGCAGCGAAGGCGCAGGCCGCCGCTCAAGCAGCTGCGCAAGCAGCGGCGGCGCAGCATCAGCAGGAAAATCAGATGCAGCTCGGCCCGCCTCAGCAGAGTCCTCAGCTTCCGCCACACCCGCAGCCGCCGCCACCGATGATGTTGACGCCGCCCGGACCCCATCATCCGCACCCTCAGCTCAGCATGCAAGAATTGCAAAAGaagcaacaacagcagcagcaacaaatGTCACTGCACTCGCCACATCATCAGATGGCACCGTCGCCTCTTCGCAGTCTTCATCCGCACATTTCACCAAGCGTATATGAGATGGCCGCTCTTACGCAGGATCTCGACACACAGACGATTACCACGAAGATCAAGGAAGCGTTACTGGCGAATAACATCGGCCAGAAGATCTTCGGCGAAGCAGTCCTCGGTCTGTCGCAGGGTTCCGTCAGCGAGCTGCTGAGCAAGCCGAAACCGTGGCATATGCTCAGCATAAAAGGCCGGGAGCCTTTCATCAGGATGCAACTTTGGCTGTCAGACGCGCACAATGTCGATCGACTTCAGGCGTTGAAGAACGAACGACGGGAGGCAAATAAGAGACGACGCAGCAGCGGTCCAGGTCACGACAATAGTTCTGATACTTCGAGCAACGACACTGCCGAGTTTTATCATGCGGCATCACCTGGCCCGGGACCCACTACCGGCAAGAAGCAGCGCGTCCTCTTCTCGGAGGAGCAGAAGGAAGCTCTCAGACTCGCATTCGCTTTGGATCCGTATCCCAACGTGGCCACCATCGAATTTCTTGCCGGTGAACTTGCCCTGTCTTCAAGGACGATAACGAACTGGTTCCACAATCATCGAATGAGACTCAAGCAACAGACGCCGCATGGCCAGCCAGAACCGCAATCACCGCGAGAACCCGGCCAACCGTTTGACCCCGTTCAATTCAGATTGCTATTGAACCAAAGACTGCTGGAGATTCAGAAAGAGAGACTGGGTCTAGGAAATGTACCCTTACCTTACTCTCCGTACTTTAATCCCAACTTGGCGGCTCTGGTAGGTAACGCGCTGAAAGAACAATGTTCCGGCCTCGATCTCTCGATGAACGCCCTGAAGAGGGAACCGAATCAGGAATTTGAGGATGAAGATGTCGAGGACGCGATGAGTAATCTCGGTAGCGAGGACTCGGAGGGTTCGGCCGGCAGTATAAAAAGGGAGCCCACAGAAACGCCGACGGCACCCACGACGGTCAGGTCCAATAGAAGGAAACCCGCGGCACCGCAATGGGTTAATCCGGAATGGCAAGAACCGACGAGAGCAGGTGACGAAGTCATCATCAACGGCGTTTGCGTGATGCAAACGGATGATTACGGTGTGAAGAGGGAGACCGAGGAGACCATAAGAGTCGACCCAACCCCGGTGCAGGATCGATACGAGGAAGATGCCCAGAGCGACGTCTCCTCTGTATCCGGTAACAATGGGCCCGATCGGGACAGCCCACTGCCCAGTCCAAAATCCGGTCAGAATAGTCCAACGACGTCACTCAGACCGCCGTCGGCGCAACAGACGCAACAGTCCACGGAGGAGAGTCCGAAGGACGTGGTAAAGCACGAACCCGAGGAAACGTGGGATTACTAG
Protein Sequence: INQLVEEVSRLQQSLQRLQETSAQATARLEEELEVRRQHISRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTAVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMSQQQQQQQQQQQQQQQQQQQQQQQQPQSQPSQLSQLAQQQQQLQQAQPHMGLHPPTTPSSLNHLPSPGADPSSTSNTPAKSNTPIGTVSLGNLDVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSLVETSTSSASINGGGLTPGVPSAPPPKSPADQESCHNNNNNSHHLANNNIGGLSVLETLKSPFRFDDRTYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGMPAFARGPQDGGPPEMNDERLAHILSESSHMQMRGEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDIRPREFSSAIFPHFFSGTQGGLQGIERTQEDIRMALDAYHRELQKLNAAPGQNPSMAGLPGLPGLPGLLALQQQALQQHHLAANGGGGAVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFASAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAQHQQENQMQLGPPQQSPQLPPHPQPPPPMMLTPPGPHHPHPQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPTETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRAGDEVIINGVCVMQTDDYGVKRETEETIRVDPTPVQDRYEEDAQSDVSSVSGNNGPDRDSPLPSPKSGQNSPTTSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01394913;
90% Identity: iTF_00982081;
80% Identity: iTF_00868003;