Lnig010146.1
Basic Information
- Insect
- Lasius niger
- Gene Symbol
- grh
- Assembly
- GCA_001045655.1
- Location
- LBMM01001162.1:23970-28254[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-11 6.3e-07 28.9 0.0 29 66 34 71 21 84 0.89 2 2 0.00086 7.7 5.7 2.4 204 221 85 102 82 104 0.91
Sequence Information
- Coding Sequence
- ATGCAAGTTTTTATCCACGCGCACATGCTGGAGCCATGTATCCacactttttttcattcgGAGAATCTTATCTGTCTGCCCTTTAGTTTCTCACCTTACGGATTTAAGTACCATCTGGAATCGCCGATCAGCACGTCGCAGCGCCGCGAGGATGACAGAATAACGTATATCAACAAGGGCCAATTTTACGGTATCACGTTGGACTATGTGCCCGACCCTGACAAACCACTCCTTAAGGCAGGACAGACGGTCAAGGGGGCAGAGAGGAAGACCCGGGACGAGGAGAGACGCGCGGCCAAGAGGAAGATGACGGCGACCGGCAGAAAAAAGCTCGACGAGCTTTATCACTCTGTCACGGAGCGCAGCGAGTTTTACTCTATGGTCGATCTGCACAAACCACCGGTGCTGTTCTCGCCACCGGCCGAGCATGCCATCGACAAGTTCTCGACGATGGAGTTGTCGGGCTTCTacggtggtggcggcggcgggggCGGGGGTGACACCGACACCTCGTCCCTCAGTAACGGTGAAAGTGGAGGATTGAAGGCAGGGGGTAGCAGCCCCTATCCGGCGGCATGCGGCCGGCCGAGTCTGCCGGCCCTCAAGTTCCACAACCACTTTCCACCCGACAATCTCAGTAGCCTGCACGACAAGAAGGACTCGTTGCTGATGCAGGTGCAGGAGCTGCAGGGCTCGGTGCTGCAGGGGGTGCAACAGGCCGGCTTGTCAGGCGCGGTGGTATCCAACAATCGGCTCCACCTGCAGCAACAGCCGCCGCATTTGCGTCCGAGCGACGCCGAGGAGCGCGTAATGCTGTACGTGCGTCAAGAATCTCAAGAAGTCTACACGCCGTTGCACGTTACGCCACCGACGGTCCAGGGATTGCTCAATGCTGTAAGAAATATACTCTAA
- Protein Sequence
- MQVFIHAHMLEPCIHTFFHSENLICLPFSFSPYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKAGQTVKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMVDLHKPPVLFSPPAEHAIDKFSTMELSGFYGGGGGGGGGDTDTSSLSNGESGGLKAGGSSPYPAACGRPSLPALKFHNHFPPDNLSSLHDKKDSLLMQVQELQGSVLQGVQQAGLSGAVVSNNRLHLQQQPPHLRPSDAEERVMLYVRQESQEVYTPLHVTPPTVQGLLNAVRNIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -