Lnig008255.1
Basic Information
- Insect
- Lasius niger
- Gene Symbol
- Atf2
- Assembly
- GCA_001045655.1
- Location
- LBMM01000223.1:34898-39956[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1 3.7e+03 -2.0 0.0 26 44 163 181 161 183 0.85 2 2 7e-12 1.3e-08 34.7 6.4 4 65 319 380 316 380 0.93
Sequence Information
- Coding Sequence
- ATGACTGATACAGAGAAACTCTTTGCTTGTTCCACATCAGGCTGCAATATGAGCTTTACAAATGAAGATCAATTAACAGTGCATAAAAAGAAGCATGACATGATGCTTAATCTTGGCAATAATCCCAAGAGTGCTGGGTTTGTTGCAGACCAAACTCCAACGCCGacgagatttttcaaaaattgtgagGAAGTTGGTTTATTTCAAGATCTTCAAGTCAATCCTTTTGAAGAGACATTTCGAAGAGCTGTTGAGGCTGGAAACACTGGCACACTTACAGTACCAGAGgcTGGAATTACAGATGATACACTGCATACTCCGcatatttttccttatatatCAGATGTATTGCCTGCGAATAGTCAAATCCTTTCTGAAAACAATGTTGAAGATTGCCCCTCAACTGTGTCTCTTAGCGAAAAAAATGCAGAGGATGATAATGCTATAAAATCAGACGAATGTAGcagtattaaaataagtacAAACGAGATGCAGGAAATGACGAAAGACGCAAATGTTACGTCTGCGAAAAATAGTACTCTCGCACCAAATATTATTGTCTCAGATACAAATACACCCATAGCGCCTAAACTTTCGCCGACACAACTTTCATCGCAtttGTCCATTAATGGTGAGGAGGTGCAACTGCTACTGAAAATGGCGGATGGTAAATTGATGCAACTATCTGCGACGCCAGTGTCTGAGTCTTCCAATGTGGCCAACGTTAGCGCTAAACAGCAAACCGTCGTTATCAAAACCGAGCCGACTCTGCGATGCGTAGTAAAATCGGAATCCAAGAAAACTGTGATCTCCAGGTTATCCTTGGCGAAAATGAAGCTGAAACAAACCTTATCTAAGAACTCACAGAATCAAAGAGCGATAGAAGGAAGCGCAAAAATGGAGGCAATCGCtatatcgaaaaaagaaaatgtcaagAAAACAGTCGATCaagttaaaaagaaagatattctcGAGCGCAATCGTGCCAGTTCTATGCGTGCGCGGGCTAAGAGGAAAGCGTGGATCCAAGACCTCCAGAGAACAGTCACTAACGTGAACGAGGCGAATGCAGCCTTGCAAATGGAAGTGAAGGCTCTACGTTCGGAAGTGGCGAAGTTGAAGACTCTTCTGCTGGCGCACAAAGATTGTCCGGTCACGAAAGCGATGCAGAAAGgAAACGGGATAGTTCTTGgaccaaaaataatatcaattaataatccgGACGTGTTGACGATGCCGATATCAGCCAATAGTATTCCTGTAAAACGATCAGCCTCTTACACGGAGACCCCGAACATGCCGGTGAAGAAATCGGCTCTGTCAATCACGAAGAATCCGATGATCTTTCCGAAGGTGGATTGCGGCACCGCGAATATCACACTTCCGAACGCAACAATCATAAAAAGCTTGCCAACATTGAAGATCGTAGGTGTTAATCAGTTTTTGCCGGAAAAGCCCGAAGAAACGAAGCAAATACTTATCGTGCAAAATCAGCCGAGAAAATTGTGCGAAGCTAGGCAGGTCATTCAAATTAATCCAAATTACGAGGTGGAACACGCGGCGTCTAAAAGTACGGGAACGTAA
- Protein Sequence
- MTDTEKLFACSTSGCNMSFTNEDQLTVHKKKHDMMLNLGNNPKSAGFVADQTPTPTRFFKNCEEVGLFQDLQVNPFEETFRRAVEAGNTGTLTVPEAGITDDTLHTPHIFPYISDVLPANSQILSENNVEDCPSTVSLSEKNAEDDNAIKSDECSSIKISTNEMQEMTKDANVTSAKNSTLAPNIIVSDTNTPIAPKLSPTQLSSHLSINGEEVQLLLKMADGKLMQLSATPVSESSNVANVSAKQQTVVIKTEPTLRCVVKSESKKTVISRLSLAKMKLKQTLSKNSQNQRAIEGSAKMEAIAISKKENVKKTVDQVKKKDILERNRASSMRARAKRKAWIQDLQRTVTNVNEANAALQMEVKALRSEVAKLKTLLLAHKDCPVTKAMQKGNGIVLGPKIISINNPDVLTMPISANSIPVKRSASYTETPNMPVKKSALSITKNPMIFPKVDCGTANITLPNATIIKSLPTLKIVGVNQFLPEKPEETKQILIVQNQPRKLCEARQVIQINPNYEVEHAASKSTGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00280414;
- 90% Identity
- iTF_01077228;
- 80% Identity
- -