Lnig001448.1
Basic Information
- Insect
- Lasius niger
- Gene Symbol
- nfil3
- Assembly
- GCA_001045655.1
- Location
- LBMM01000921.1:25522-37075[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-14 5.7e-11 42.3 0.4 2 59 187 244 186 249 0.91 2 2 1.2 2.1e+03 -1.2 0.0 42 52 459 469 452 471 0.67
Sequence Information
- Coding Sequence
- ATGTGCATCCATTGTGTCTGGTCGCGGTGCATATCTTATCAGCTGACTGTCGATTCGTGGCTGAATCATGGACTCTCGAATAACGCAGATGTACTAAGAAGACAAATTATGGTGGCAGAATTTGTCGCCCGCCAGAGTGGATCGCCCATTAATGGTGAGACGGCGTGTCTGAACAGCAACATACCGGCCACGCACACAATGGCGCATGGCGGCGGCCATGGCGCGCCCCATAACGGGCCCCACGATGCCCACGGACCCCTCACGGTGCCCCTCACGCATCCCGGTCATCACGGCGGACCGCCGGTCGCGATCCAGCAGCATCAACATCAACTGCAACAGCAaccaccgccgccaccgccaccgcagcagcagcagcaaccgCCGCATCACCATAATCATCATCAGACTCAGCAatcgcagcagcagcagcagcaacagcagcatcATCACGACCCATCGCAAGAGTCGCATCCCGACATGTACTCGTCCAACTTTGACATTCGTAAGGAGCTGTTCTCACAGCGCAAGCAGCGCGAGTTCATCCCCGACAACAAAAAGGACGACAGCTACTGGGATCGCCGCAGGCGCAACAACGAGGCGGCCAAGCGGTCCCGTGAGAAGCGTCGCTTCAACGACATGGTGCTGGAGCAGCGGGTGATGGAATTGAGCAAGGAGAATCATATTCTCAAGGCGCAACTCGACGCGATACGGGACAAGTTTGGCATCTGTGGCGAGTCTGTCATCAGCACCGAGCACGTGTTGGCCGCGCTGCCAACGGAACCGCCGATCAGCGTGAAGCGAGCGAAACTTCCGACGTCGACGGCGCTCCTGTACGCTCGCACGCCCAGCCCGGTGCACACGTCGGTGATCCATCAGCCGGTGAGTGGCGCTAGATCGCCCAGATCGCCCGCTTCGCAGCTTTACGTGCCCGAGACGACCGCGTATCCCGAGACGGAGAGCTTTCAGTACCCGTACTCGCATCCGGCGATGCACCACTTGGATAATACCACGAGCGCGCTCAATCTATCGTCGCGCGGTCGCCGGGCACAATCGCCGTACGAGCTCTCGTCGGGCAGCGGCGACGAGGCCGGCGGTCCCCAGATAATCGTTGGCTCCCAGAACAATCCAACGGCCGCCAACAATAGTTTGCCGCACAAGCTCAGGCACAAGTCGCGCATCGGCGACAAGGATGCCGCGAGCGCGCTTTTGGCGCTCCAAGGTATCAAGCAGGAACCTGGACCGCGGGCATCGCCGCCCTGGGATAACGAAGGCTCGAGCGACGAGCGCGATTCCGGCATCTCATTGGGCGCCGAATGGACCGGCCCGACCGTCACCGCTGTCTCGGAGAGCGACCGGGAGGTAAAGATGAAGTTGGACCGTCTGGCATCCGAGGTCGCGTCCCTGCAGTCGATATTTCGTCTCGGGAAACCGGTcacggcagcagcagcagcagcagcggcagcggcggcggccgcGGCGGACGGTTTGGTGACCGGACACGCTGTCGCCGCCGCGGTCAGCGGGCCGTGA
- Protein Sequence
- MCIHCVWSRCISYQLTVDSWLNHGLSNNADVLRRQIMVAEFVARQSGSPINGETACLNSNIPATHTMAHGGGHGAPHNGPHDAHGPLTVPLTHPGHHGGPPVAIQQHQHQLQQQPPPPPPPQQQQQPPHHHNHHQTQQSQQQQQQQQHHHDPSQESHPDMYSSNFDIRKELFSQRKQREFIPDNKKDDSYWDRRRRNNEAAKRSREKRRFNDMVLEQRVMELSKENHILKAQLDAIRDKFGICGESVISTEHVLAALPTEPPISVKRAKLPTSTALLYARTPSPVHTSVIHQPVSGARSPRSPASQLYVPETTAYPETESFQYPYSHPAMHHLDNTTSALNLSSRGRRAQSPYELSSGSGDEAGGPQIIVGSQNNPTAANNSLPHKLRHKSRIGDKDAASALLALQGIKQEPGPRASPPWDNEGSSDERDSGISLGAEWTGPTVTAVSESDREVKMKLDRLASEVASLQSIFRLGKPVTAAAAAAAAAAAAAADGLVTGHAVAAAVSGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126457;
- 90% Identity
- iTF_00264768;
- 80% Identity
- -