Lful009651.1
Basic Information
- Insect
- Lasius fuliginosus
- Gene Symbol
- -
- Assembly
- GCA_949152495.1
- Location
- OX424445.1:5058264-5062390[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4 2.4e+04 -3.4 0.6 6 10 25 29 24 30 0.69 2 2 7.1e-09 7.1e-05 23.9 11.5 1 16 35 50 35 51 0.96
Sequence Information
- Coding Sequence
- ATGGTGACCAAGTATTGCGGCTGCGGAAGAATGTCGAAGATGCTGCTATGCAGCGCTCACCAACTGTTGCAGTGCGTTTCGATATGCAAAAAAGATTTGTCGTGCGGCAAGCACACTTGTCAGAGAAAATGCCATCAGGGAGAGTGCGACGAGACCGTGCGACAGAaCAATGATTCGTCGAGGGACGACGACTCACTCTCGTCGGATATCTTTTCCCGAGCAAGATCCCGATTCGAGTCCCGAAATGATCGCGTCAATCAACAGACTCCTCTCGTCCGGTCCAGTCCAAATCGATCGTCGTCAATCAACGGCCAGGTGGGTACCGTTAGGTATCAGGGTGTCATGAACGAGGAGTAA
- Protein Sequence
- MVTKYCGCGRMSKMLLCSAHQLLQCVSICKKDLSCGKHTCQRKCHQGECDETVRQNNDSSRDDDSLSSDIFSRARSRFESRNDRVNQQTPLVRSSPNRSSSINGQVGTVRYQGVMNEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -