Basic Information

Insect: Lasius fuliginosus
Gene Symbol: stc
Assembly: GCA_949152495.1
Location: OX424445.1:5170643-5175242[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3 3e+04 -3.7 1.1 15 19 481 485 480 485 0.82

2 13 0.71 7.1e+03 -1.7 0.3 4 10 514 520 513 522 0.91

3 13 1.4e-05 0.14 13.3 13.6 3 18 530 545 520 546 0.90

4 13 9e-09 9.1e-05 23.5 16.8 1 18 582 599 582 600 0.98

5 13 7.9e-07 0.0079 17.3 11.9 1 19 638 656 638 656 0.92

6 13 7.6e-05 0.76 11.0 11.8 4 18 703 717 696 718 0.86

7 13 4 4e+04 -4.6 1.6 5 10 747 752 747 752 0.90

8 13 0.013 1.3e+02 3.8 10.9 1 11 758 768 758 780 0.90

9 13 4.7e-09 4.7e-05 24.4 11.6 1 19 785 803 785 803 0.98

10 13 4 4e+04 -4.4 0.8 6 10 832 836 832 836 0.89

11 13 4 4e+04 -5.5 7.9 10 18 850 859 848 860 0.79

12 13 4.9e-06 0.049 14.8 11.1 1 16 896 911 896 922 0.84

13 13 1.2e-05 0.12 13.5 13.3 1 19 928 947 928 947 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3	3e+04	-3.7	1.1	15	19	481	485	480	485	0.82
2	13	0.71	7.1e+03	-1.7	0.3	4	10	514	520	513	522	0.91
3	13	1.4e-05	0.14	13.3	13.6	3	18	530	545	520	546	0.90
4	13	9e-09	9.1e-05	23.5	16.8	1	18	582	599	582	600	0.98
5	13	7.9e-07	0.0079	17.3	11.9	1	19	638	656	638	656	0.92
6	13	7.6e-05	0.76	11.0	11.8	4	18	703	717	696	718	0.86
7	13	4	4e+04	-4.6	1.6	5	10	747	752	747	752	0.90
8	13	0.013	1.3e+02	3.8	10.9	1	11	758	768	758	780	0.90
9	13	4.7e-09	4.7e-05	24.4	11.6	1	19	785	803	785	803	0.98
10	13	4	4e+04	-4.4	0.8	6	10	832	836	832	836	0.89
11	13	4	4e+04	-5.5	7.9	10	18	850	859	848	860	0.79
12	13	4.9e-06	0.049	14.8	11.1	1	16	896	911	896	922	0.84
13	13	1.2e-05	0.12	13.5	13.3	1	19	928	947	928	947	0.97

Sequence Information

Coding Sequence: atggCCGCCTGGGACGGCTCGTTTCAGACGGAGGATCCTAATTACTGCGCGCACTCCGCCGCGGAAAACAGCTGGACGTACTTTGACGTGAACTCGGCGGGGAACTGTCATCCGGCAGCTGGCGGCGGTCGACCATCGGTGACGTACGAGCGGACGAGCGGACGAGCGGGTCAATCTGCTCTTTGTCAAATCGACCCTCAGCATCCGTCGACTATGGTGCCTTTAGAAGATACTTATTATCAGGAACACATACTGCCAAGCTCGAGCGGCTCGTTGCAAAATTCGTCGAATAATTCGCGCAACGCGCCCTTCTTCCGCGACAATCAGAAGCCGAGATCCAGGGGTAACAGAGCGATCGGCAAGCCTATCTCGTCGGAAGGCGATATCATCCAGTCCAGCATAGTGCAAAACTCCAATTTGCAAGCCACAGCCAACGAATTCGTGCCAAACAGCGTTAGGAATAAGAAGGACAGGTTTAGCAAGCAGGAGGATCGCGATAATGCGGCGGGAGGTAGCTTTGATGCCCAGGATTTCAGGCCTAGATCGATTAACAAGTACGCGTCTTCGTCGGATAATAGGTACAAGGGTGAGAGACGCTACGACAACAGGAGGGAAGTGAATTATAGGCAGAAGAATCCGCAAGACGCACAGGCTCCACCAAGATCCAACTACAGGGATGCTCAGAGAAGTGGGAACGGTGGGAGGAACTACAATAAATTTCAGAAtggcaaatattataatagaagaCATCAGGATGCATCGTTCGTAGAACAACACACTGCTGGAAAAGCTCGTACACCTACAACTGAACACGGTACAAGTTCATTCACGTTTGATAGACAGGAAAATAAGGCTTTTGCTAAAGAACTTCAGGAGGATGACGGCAGAAGCAGAGGGGGGGCATGCGAGGACAATGATTCGGAGAATGCCTCCTTGAAAGATCTTGAGACACAACGAAATAGTAAACCTAAGAGATTCACTGATCACGCTAACGCGTCTAactattacaataaatacaattataaatacaagcactattataaatacaattcaGATGATGTACAGTCCGAATCTGGTGGTAGACAAACTGCAAGTAAAACTGCAGTAGGTGCTACAAAGTATATGCATAAGAGGAACAATGAGGGGACAGCGAATCACAAAGAGAAGAACTTGGAGAATTGGAGAGATAGGGCAGAAGATAACGATGCAACACGTGTACAGGGAAAAAGTCTGAAGAATAAACACAAAATCGATGATGATGCGAGTCAAAGGGAGAGATTGACGGAGCAATTGAACAGAGGAATATTGGAATGTTTAGTCTGTTATGAGCATATCAAGCAAAGCGAGTACGTTTGGTCCTGCAATAACTGTTACCACGTATTGCACctaaaatgcataaaaaaatgggCGAAATCGTCTCAGAGCGAGAACAGTTGGAAGTGCCCAGCCTGCCGGGACATTAGTCTTCTCGTACCAGAGGAGTATTTCTGTTTCTGCGGGAAGAGGAAGATGCCGGAGTGGAATCGCAGGGACGTAGCTCACTCGTGCGGCGATATCTGCGGTCGAAATCTGTCCAAGAACAATTGCACGCACAAATGTACCCTGCTTTGCCATCCCGGCTCTTGTCCGCAGTGCGTGGCGATGGTGACCAAGTATTGCGGCTGCGGAAGAATGTCGAAGATGCTGCTATGCAGCGCTCACCAACTGTTGCAGTGCGATTCGATATGCGAAAAAGATCTGTCGTGCGGCAAGCACACTTGTCAGAGAAAATGCCATCAGGGAGAGTGCGGGCCTTGCGACGAGACCGTGCGACAGACCTGTTTTTGTGGTAAGAAAACTCAGGAGGTACCTTGCCGAGCTAATGTCACAGATACATATTCCTGTAATAATATCTGCAACAAACCACTGGACTGCGAGAAACATTATTGCCAAGAAGTCTGCCATCTGGGGACATGCGGGCCTTGCTCCTTGACGCCCGAAAGGATCACAACGTGCTGTTGCGGTCAAACGCCGTTAacggagaagagagaaagctGCTTGGATCCTGTGCCCATCTGCGACAAAATCTGTTCTAAGCGTCTGAGATGCGGCCAACCTAGTAATCCACATATCTGCAAAGCACCCTGCCACGTCGGCGACTGTCCGGACTGCGACTTGAATACCGATGTCAAGTGCCGATGCGGTAACATGGATCGCGAGATCGCTTGTAAGGAGCTGACGAGTAAAGCCGACGACGCGCGCTGCGAGAAGCGTTGCAAGAAGAAACGATCCTGCGGCAAGCACAACTGCAATCAGCTGTGTTGCATCGACATCGAGCACGTCTGCCCGTTGCCGTGTTCGAAGACGTTGAGCTGCGGTCGGCACAAGTGCCAGGAGAGATGTCACATGGGGAGATGTTCGCCTTGTTGGCAGAGTAGCTTCGAAGAACTGTACTGCGAGTGCGGTGCCGAGGTGATCTATCCACCGGTACCGTGCGGTACGAGAAGGCCCGTTTGCAATCGGCCATGTTCGCGCGAGCATCCCTGCGATCACGAGGTGCTGCACAACTGTCACAGCGAGCCCGCGTGTCCGCCTTGCGGCGTGTTGACTCAGAGATGGTGCCACGGTAAACACGAGCTCAGGAAGGCCGTGCCGTGCCACGTGAAGGAGATCTCGTGCGGTCTGCCGTGCAATAAGCCGCTGACGTGCGGACGGCATAAATGCATCACGATGTGTCACGCCGGGTCTTGCGAGAGACCCGGACAACAGTGCACGCAACCTTGCAGCATGACGAGGGAGCTGTGCGGACATATCTGTGCCGCTCCGTGCCACGAAGGCAGGTGTCCGGACACGCCTTGCAAAGAGATGGTTAAGGTTACATGTCAGTGCGGACACAGGACCATGAGTCGTGTTTGCGCCGACAATGCGCGAGAGTATCAACGGATAGCCAGCAACATCCTAGCCAGTAAGATGGCCGACATGCAGCTCGGGCATTCCGTCGATTTGGAGGAAGTATTCGGGCAAGGCGCAAAGAAACAGAATCAGCTGAAGACCCTGGAGTGCAACGATGAGTGCAAGACGATAGAGAGAAACAGAAGACTCGCGCTGGGACTGCAGATCGTCAATCCCGACCTGAGCGGAAAGTTGATGCCCAGATATACCGATTACATGAAACAATGGGCCAAGAAAGACCCGCACTTCTGCCAGATGGTCCACGAGAAACTGACGGAATTAGTCCAATTGGCGAAGACGTCTAAGCAGAAGTCTCGAAGTTACTCGTTCGACGTTATGAATAGGGAGAAGCGCCATTTCGTGCATGAATCGTGCCAACACTTTGGCTGCGAGAGTCAAGCGTACGACGAGGAGCCGAAAAGGAATGTCGTCGCCACTGCTGTGAAAGATAAGTGTTGGCTACCAAGCTACAGTTTACTGGAAATGGTACAGCGGGAGAAGGGACAAAGAAAAGTTCCAGGACCGGTACTTAACGCTTCTAAAGGAAATAATTCTACAAAGACTGTTCTTTCGTTACCTGTAAAACAGAGTCAGAAATCATTACCATCGCCATCAACTGCAAAACCAACTGACAAAGAGATAGATTATTTTGACTATCGAGGATGA
Protein Sequence: MAAWDGSFQTEDPNYCAHSAAENSWTYFDVNSAGNCHPAAGGGRPSVTYERTSGRAGQSALCQIDPQHPSTMVPLEDTYYQEHILPSSSGSLQNSSNNSRNAPFFRDNQKPRSRGNRAIGKPISSEGDIIQSSIVQNSNLQATANEFVPNSVRNKKDRFSKQEDRDNAAGGSFDAQDFRPRSINKYASSSDNRYKGERRYDNRREVNYRQKNPQDAQAPPRSNYRDAQRSGNGGRNYNKFQNGKYYNRRHQDASFVEQHTAGKARTPTTEHGTSSFTFDRQENKAFAKELQEDDGRSRGGACEDNDSENASLKDLETQRNSKPKRFTDHANASNYYNKYNYKYKHYYKYNSDDVQSESGGRQTASKTAVGATKYMHKRNNEGTANHKEKNLENWRDRAEDNDATRVQGKSLKNKHKIDDDASQRERLTEQLNRGILECLVCYEHIKQSEYVWSCNNCYHVLHLKCIKKWAKSSQSENSWKCPACRDISLLVPEEYFCFCGKRKMPEWNRRDVAHSCGDICGRNLSKNNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRMSKMLLCSAHQLLQCDSICEKDLSCGKHTCQRKCHQGECGPCDETVRQTCFCGKKTQEVPCRANVTDTYSCNNICNKPLDCEKHYCQEVCHLGTCGPCSLTPERITTCCCGQTPLTEKRESCLDPVPICDKICSKRLRCGQPSNPHICKAPCHVGDCPDCDLNTDVKCRCGNMDREIACKELTSKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHVCPLPCSKTLSCGRHKCQERCHMGRCSPCWQSSFEELYCECGAEVIYPPVPCGTRRPVCNRPCSREHPCDHEVLHNCHSEPACPPCGVLTQRWCHGKHELRKAVPCHVKEISCGLPCNKPLTCGRHKCITMCHAGSCERPGQQCTQPCSMTRELCGHICAAPCHEGRCPDTPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDVMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMVQREKGQRKVPGPVLNASKGNNSTKTVLSLPVKQSQKSLPSPSTAKPTDKEIDYFDYRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00869301;
90% Identity: iTF_00869301;
80% Identity: -