Lful000741.1
Basic Information
- Insect
- Lasius fuliginosus
- Gene Symbol
- -
- Assembly
- GCA_949152495.1
- Location
- CASCJU010000084.1:53954-55337[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-09 4.3e-06 27.4 0.1 1 37 15 52 15 58 0.91 2 2 8.1 1.8e+04 -3.4 0.0 28 34 361 367 361 369 0.84
Sequence Information
- Coding Sequence
- ATGCCTATATTCAAAGGCAGAAGCACAAGCCGAGGAGACTGGAGcgaagaaaatatgaaaagagcAATTCAAGAAATTCTTGAACGTAAGAGTTCTGCGAGAACTGCCGCAGATAGATACCAAGTTCCACACACTTCACTGCAGGATCGTGTCAAGGCTATAAAACAAGGTCATCAGATTATTCTCAAGCCGAAACTAGGGCgttttcaacaaatatttacCTCTGAATTTGAAAGGCAACTGTGTGAGCATGTCATCGATTTGGATAATCGTCTCATGCCTTTAACAAGAAGCGAGTTTTTATGCCTTGCCTTTGATCTAGcagaaaaaatcaaaatttctcACAGATTTAATGAGGAAAAGCGGATGGCTgggaaagattttttttgtaacttcAAAAAGAGAAATCCAGATTTAGCATTGAGAACGCCTGAGGCGACAAGCTTGATGCGAGCTACAGGCTTCAATAGACCTCAGGAGTCTCTACTGTCCATAAAAATGACAAAGTTTTGTCAGTCAAAGGGAAGAAACAAATTGGGGAACACGTCCGCAGAACGAGGTCGTAATGTCACTGCTATGTTTGCTATAAATGCTACAGGTCACTTTGTACCACCCATGTTTATTTTTCCAAGGATGAAAATGGATAAGAATGGTCGTCTGATGATTGGTGCTCCTCCAGAAAGCATTGGTGTTGCTTGTGAAAGCGGTTGGATGAATGCTGAGACATTCCTTCGATGGCTACAACATTTTCAGCAGCATGTTCGTTCTTCTGCAACTCGTCCGATTCTTCTGATATTGGATGGACATAGTAGCCATAAAGAGCTGAATGTTATTGAATATGCTCGGAATAATCACATCCACATGCTGAGCACTCCTCCGCACACAACTCATAAGCTTCAACCGCTTGACCAATACGATATTGCTGGACTTGTTAGCACAGCGTTTACCAAAGTTGCTAAACTGGATATAGCCCAAAATGGCTTCCGCTGCACGGGAATTCAGCCGTTCAATCGAGACATATTCTTAGACCTAGACTTCTTAGGCTCTGCTTTGACCGATATCCCACTGATTGAAGATCAGATTAACCATTCAACAATCCAAGCTTCCAGTCATGCAGTCCCTGAAAACGAACCGGAACCATCGACTACTGCTTTACCTAAGACCTCAGCTACTCTTCAGATGAAAGTGCCAAGCACATCCGTCAATGTTGAATAA
- Protein Sequence
- MPIFKGRSTSRGDWSEENMKRAIQEILERKSSARTAADRYQVPHTSLQDRVKAIKQGHQIILKPKLGRFQQIFTSEFERQLCEHVIDLDNRLMPLTRSEFLCLAFDLAEKIKISHRFNEEKRMAGKDFFCNFKKRNPDLALRTPEATSLMRATGFNRPQESLLSIKMTKFCQSKGRNKLGNTSAERGRNVTAMFAINATGHFVPPMFIFPRMKMDKNGRLMIGAPPESIGVACESGWMNAETFLRWLQHFQQHVRSSATRPILLILDGHSSHKELNVIEYARNNHIHMLSTPPHTTHKLQPLDQYDIAGLVSTAFTKVAKLDIAQNGFRCTGIQPFNRDIFLDLDFLGSALTDIPLIEDQINHSTIQASSHAVPENEPEPSTTALPKTSATLQMKVPSTSVNVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -