Lful000736.1
Basic Information
- Insect
- Lasius fuliginosus
- Gene Symbol
- JRK
- Assembly
- GCA_949152495.1
- Location
- CASCJU010000084.1:40268-41860[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-11 6.1e-08 33.4 0.2 1 40 15 55 15 59 0.91
Sequence Information
- Coding Sequence
- ATGGTTAGAAACTATAAACGAAAGACAGACCGAGGACAGTGGTCAGAAGAAGCAATGCGTAATGCCATTTCTGCGGTATTAGAAGGAAAGATGGGTTATTATCTAGCGGCGAAAACATATTCGATCCCACAGACTacattagaaagaaaaataaaacaagctcgtgaaaataaaaatatcattcaaaAAGTCAAGGTACCTCTGGGGCCCAAATCTCCTATATTTTCAGATAAAGAAGAGGCTGAGCTGgttgaatatttaaaagaaatggAAAGTAGACTTTTTGGGCTCACGACTGTCGATCTAAAGTCTTTAGTGTACCAACTAGgaacaaaaaataagaaaaatcatCCTTTCAATGATGATAAAGGTAAAGCTGGAAAAGATTGGCTACTTGGATTTTTAAAACGTCACCCGGACTTGGCGATTAGGAAACCCGAGAACACATCAGCTGCTAGAGCTTCCGGTTTTAATAAAGTTGCTGttgaaaatttctataaattactaggcgaaatttatgataaacatCAACTAACTGCTGATCGTGTCTATAATTGTGATGAGACCGGAGTATCAATTGTcccaaaaataaaatgcaaaataattgcaaaaacaGGCCGGAAACAAGTTGGTGCATTGGTTTCTGCTGAACGAGGTACAACGATTACAGTCGAAATATGTTTCAGCGTGACTGGACACTACATGCCTCCAATGTTAGTGTTTCCTCGCAAGAGAATGAAACCAGAATTAATGACAAATGCTTCACTGGGTGCTTGGGGTGTGTGTAATCACTCTGGATGGATGACAGCCGAGCTATTCTTACAATGGTTTAGGAAATTCGTGGCCTTCAGCGGGGCATCTAAAGAACATTCCGTTTTATTGCTGCTGGATGGACATTGCACTCACACAAAGAACATAGAAGTAATTGACGAAGCAAAAACAAATGGAGTTATAATATTGTGCTTTCCACCCCACACTACACATCGCCTTCAACCACTTGATGTGGTATTCATGAAATCTTTAAGCGTATATTATGATCAGATAATATCTTCGTGGCTTCGCTCTAATCCAGGGCTCATAGTTACTACACATCAAGTGGCGGAATTATTTGGCAAGGCTTTTATTCAGGCAGCGACTATGTTAATCGCCATTAACGGTTTCAAAAAATGTGAGATTTGGCCATTTAATCCCACTGTTTTTAcagaaattgattttatagcTTCTATGACAACAGATATTCCCTTGCATGAAAGGGAAGAGCCTGCTACAAACACCAGTCAAAATGAAGATACACAACCAGGACAACCGGCCAAACATAACTTAGATGATACGCAGCCCGGTTGCTCATTTTGGCCTGACCATCAACCGAATAACAAAGTCCCAGATCCAGAAAAAGACACTTCTTTTGCATTAATTAGTCCAAAACAACTGATGCCTGTGCCTAAGACAAAACAACAGATTCGTGCATCAAGAAGACGTGGAAAGACTGCGATAATAAAATCCTCACCTTATAAAAACGAGTTAAAAGAAGctatgaaaaagagaaatgaagtagagaaagaaaaagaagagaggaagaaaagaaaaaagtaa
- Protein Sequence
- MVRNYKRKTDRGQWSEEAMRNAISAVLEGKMGYYLAAKTYSIPQTTLERKIKQARENKNIIQKVKVPLGPKSPIFSDKEEAELVEYLKEMESRLFGLTTVDLKSLVYQLGTKNKKNHPFNDDKGKAGKDWLLGFLKRHPDLAIRKPENTSAARASGFNKVAVENFYKLLGEIYDKHQLTADRVYNCDETGVSIVPKIKCKIIAKTGRKQVGALVSAERGTTITVEICFSVTGHYMPPMLVFPRKRMKPELMTNASLGAWGVCNHSGWMTAELFLQWFRKFVAFSGASKEHSVLLLLDGHCTHTKNIEVIDEAKTNGVIILCFPPHTTHRLQPLDVVFMKSLSVYYDQIISSWLRSNPGLIVTTHQVAELFGKAFIQAATMLIAINGFKKCEIWPFNPTVFTEIDFIASMTTDIPLHEREEPATNTSQNEDTQPGQPAKHNLDDTQPGCSFWPDHQPNNKVPDPEKDTSFALISPKQLMPVPKTKQQIRASRRRGKTAIIKSSPYKNELKEAMKKRNEVEKEKEERKKRKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00867318;
- 90% Identity
- iTF_00867318;
- 80% Identity
- iTF_00867318;