Lful001821.1
Basic Information
- Insect
- Lasius fuliginosus
- Gene Symbol
- ttk
- Assembly
- GCA_949152495.1
- Location
- OX424443.1:1229096-1231943[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-14 1.1e-10 42.2 0.0 1 45 385 429 385 429 0.96
Sequence Information
- Coding Sequence
- ATGTCGGACGTCATGAATCCGGCTGCGGAGTACCGTCTCCGCTGGAATAATCATCGTTCGAATTTGCTGGACGTCTTCGAGAAGCTGCTGCAAAACGAGTCCTTCACCGACGTGAGCCTCGCCGTGGACAGCGGTCGGACCATCAAGTGCCACAAGATCGTCCTAGCGGCGTGCTCGTCCTACTTCCAGAATCTGTTCCTCGCTCTGCCCGCTGCTGTACACCCGGTGATCGTGCTCAAGGACGTCGAGTACACGGATTTGCAGGCGATATTGGAGTACATGTATCGCGGCGAGGTGAACGTGCAACACGAGCGGCTGGCATGTCTGTTCAAGGTCGCGGAGGTGCTGCAAGTGAAGGGCCTGGTGGAGTATAATAGCAGCAGTAGCGGCAACGGTGGAGAACGATCCTCGATATTCGATTTTCGTCGAGGACACGAGGACGTGGTGGGCGAGACGTCGTCGTTGTCGCCGCCACCGGCCATCAGCACCAGCACCAACGCAAACAGCGTGGCCGCTCACAGCAGCAGTCACGTGTCACCGCCGCACTCTACCTACGGCGATCTTTACAGCAAGTCCTCGCGAGCAACGTCCGCGGCAGTCAATCGAGCTCAGGGTCATCTGAGTCATGCGTTTTCCACGTGGCCGCTAGGCTTACCGTTGCATCACGAAGTCACCACGGGTCACCAATCGTCGCTGCACTCCTCTTCGGTCGCCTCGATTCTCGGTGGTGGCTGCGGCGGCAGCACTTCCTCCATCTCTTTCGACAACGGCTTCGAGAGCTCGCCGCTCAAGCGCCTGAAGAAGACCCTGCCGACGAATCTGCCGAATCGCGACACGCCGATACTGCGCACCGTCCTCGGCCTTGGTCACGTCGACAGTTCGGTCCAGGGTCCGCTATCGTTGTTGCAACCCGACAGTCACGAGTCTGCGCATTTTCGCGCGAGCAGCAACGGTTCCGCAAACGACAACGACAACCGTCACAGCAACATCGATTTGGCACACGGTGAGGCGGCCCACAGCTCCTACACGGATGTTCCTTCGATGGAGGAGGACGAGAAGCAGTCGTCGCCGCGATCGCACGCCGGGGATACCAAGTCAGGTAACGCGAGTTGCGTGCAGTCGAAGCCCGAGTGGAAACGGTACAAGCAATACACCCGAGATGACATCCAGGCGGCGATCGAGGCGGTGAAGGACGGCACGAGCGCCGTGCAGGCGGCGCGGAAATTCGGCGTGCCGTCTCGCACCCTCTACGACAAGGTGAAGAAACTCGGCATCCCGACGTCGCGGCCGTCCAAGCGCTCGATCAGCAACGGTAGCGCGGCCTGCTTCCCGTACGGTATCGGCGGTAACGTGAACGGCAGCATTTACAGCAGTAGCGTGCTGTCCGAGATCGAGAACGAGAACAACGGCAGCAACGTCAAGCTGGAGAACATGGCCAGTAGCACGTTGAGCGCTGCCGCGTACGACGCTATTTACGGTAAACCAACGAAGGACGTGTCGCAGGACCGTGACTCGATGTCCGACTCGATGGCGAGTTGCAGTCCGAGTCCGATACGCTGCCCCAAACAGAaccaacaacaacaacaacagcagcagcagcagcagcagcaacagcagcagcagtcgAGTATAGAGGACGAGGTAGAAGATTTATCGGTGAGTCGTAAATCCGATGTTCCGGTGATAGTACTCACATCATCGTCGGACGCGGTCAAGGACGAGCCGCAGGAGACGGGGTCGGACAACAATGATTGTTGCGATTATAGTTAA
- Protein Sequence
- MSDVMNPAAEYRLRWNNHRSNLLDVFEKLLQNESFTDVSLAVDSGRTIKCHKIVLAACSSYFQNLFLALPAAVHPVIVLKDVEYTDLQAILEYMYRGEVNVQHERLACLFKVAEVLQVKGLVEYNSSSSGNGGERSSIFDFRRGHEDVVGETSSLSPPPAISTSTNANSVAAHSSSHVSPPHSTYGDLYSKSSRATSAAVNRAQGHLSHAFSTWPLGLPLHHEVTTGHQSSLHSSSVASILGGGCGGSTSSISFDNGFESSPLKRLKKTLPTNLPNRDTPILRTVLGLGHVDSSVQGPLSLLQPDSHESAHFRASSNGSANDNDNRHSNIDLAHGEAAHSSYTDVPSMEEDEKQSSPRSHAGDTKSGNASCVQSKPEWKRYKQYTRDDIQAAIEAVKDGTSAVQAARKFGVPSRTLYDKVKKLGIPTSRPSKRSISNGSAACFPYGIGGNVNGSIYSSSVLSEIENENNGSNVKLENMASSTLSAAAYDAIYGKPTKDVSQDRDSMSDSMASCSPSPIRCPKQNQQQQQQQQQQQQQQQQQSSIEDEVEDLSVSRKSDVPVIVLTSSSDAVKDEPQETGSDNNDCCDYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00868972;
- 90% Identity
- iTF_00868972;
- 80% Identity
- iTF_00867544;