Lful008210.1
Basic Information
- Insect
- Lasius fuliginosus
- Gene Symbol
- lov
- Assembly
- GCA_949152495.1
- Location
- OX424444.1:19820073-19824296[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6 5.8e+03 -1.8 0.0 2 14 346 359 345 379 0.70 2 2 4.5e-16 9.9e-13 48.7 0.0 1 44 529 572 529 573 0.95
Sequence Information
- Coding Sequence
- ATGTCGAGCGTCGGGAACAGTCCTGACAGGATGGGTGTTCAATCCCTCTATTCTTTACGGTGGAACAATCATCAAGCTCACATACAACAGTTCTTCCAAGAACTGCTGCATGAAGAGAATCTGGTCGACGTGACCCTGATATGTGCCGAGAGCAGCGTCAAGGCACACAAAGTCGTCCTTAGTGCCTGCAGTCCTTTCTTCCAGAGGATATTCGCGGAGAATCCATGTAAACATCCCGTTATCGTGCTGAAGGATTTCTCGAATCATGAATTGTCCACGCTGATCGATTTTATGTATGGCGGCGAGGTGAAGATTGCCCAGGAGGAGTTACCAGGTTTAATGAGAGCCGCGGAATGCCTGCAAGTGCGCGGTCTATCGTCGTCGGAACCTAGGCTGGTGTCGGAGGAACCCAGgccgtcgtcgtcctcgtcgacGCTTCTGGAGTTTACCACGCCGGAGGACGCGCGACACGACACCCCGGAGGAGGACGACAACACGTTGGAGAACACGAGGGACATCAAGCCCACGCTGTTTCAACAAACGAGGGACCATCCTACCAAACCGCTTATTGGCCATATGAACTTTGGTATCCGCGAGAGCTGTAGCTCGCCGCTGATGCCGCGTCGAAAGCAGGCGCGTCCGCGCCGACGTTCCGGCGAACTGCTGCCGCAGGATCTGAGCAGACGCTCGACTCCGCCGGCCAGCTTGAGTCCATTGCCGAGCGTATTAAATCTCAGTGGTAACCAGCACCAGacacagcagcagcagcagctgcAACTGCAACAATCTCAGTATCCTCAACAACAAATAATCAGCAGAAATGATCAACAACAAATGATCAACGCTCAACAAAGTCAACAACAACAGCAACAAGAGGATATGGCGGAGAATCTTTCAATGAAGAAATCCATGTCGCCGAGCGGACTGGATCAGCACCGTGTGAAGACAGAGGACAGCGAAGCGACGAGCAGTCCACGCGGTTCGCCGCTTACGGGGACGAGTCTGCTACATCCGGACGGTTCCATACAAGACATACCGACGGCCGTAGCGGCGGCGGTCGCCACCGTGATACCGTCGATATCTCTGTCGCAAACGCATCCCTCCGAGTACCTGACAAGCCTCAACCAGCTGGCGAGCCAATGGCTGCCCGGGCAGAGTCCACTGCCGCCGCCTCCACCGCAGAGTCATCATTCGCGCGAAGACAGTCCTCACGGACCCGGTAGGTCTCATCCGTAtcagcaacaacagcagcaggAATCGTCAATAGCGTCGCGACGCACTTCCATGACGATGTTCACGCCATTGGACGGCGTGACACTTGGCGGCGGACTTTTCTCTCACGCCGGCACATACGAGAGGACAGTCCTCGCAGATTCGTTTCTCACGGATAATTTCAAGCAGGAGGCGTTGCAGAATATCTTCGGTGCTCCAAATCTTGTTCCTCCTCccaaaaaaatgaagaagcaTCGGAGCGACAGCGACGGAACACCGCGTAGATGGAATGATCACAACAGCCGCGCGCTCGCGGTGAACAGGCCGAAGGGACAGCATAGCGCGCCACGAGGAGGACCGCCGAGATCGTGGACAAATAACGAACTTACGTTAGCTCTGCAGCACGTCTGGGAAAAGAAGCTCACCACGTCTCAGGCTAGTCGTTTGTTCGGCATTCCTTATAACAGTCTGCTGATGTACGTGCGCGGCAAATACGGGAAGAGTCTCAAGCTGGAACAACTGCGTAGGAATTGTACCGGCGCCAACACTCCCGAGATTATGAACAACAATAACATCAAGCCCGTCCAGCAGTCAGCGCAGATGAGCCACGCGCTCACCAGCCTGTCGTTGCAGCATCCAGGTGACAACAGCGGCTTTGCCTCCCATCGCTCCCTGATCGGCGGCAACATGCCGCAGCCGCAAAGCTTCTACCCCGCCGAGTATGCCGCCGCGCCCTATCCCCTGCCGGTGAATATGGTGCATCTGTTACCTCCAAGTGAGCAGAAAACTTTCGAATCGTCCGCGAATTCAAGCGGCGACGGAAGTGGATGTCTAGGCGGTGGTGGAGACGGCAATGGTGGCGGCGATCTGACGAACTCGCAAACCAGCGAAACACCGTCGCCCATAGtcgatcatcatcatcatcatcaggagtcgtcgtcgtcgtcgtcgatgcAGCCGCAACCGACACAGTCGGCGCCCGCGTTGCTACAACAGAACGGGTCGGATTAG
- Protein Sequence
- MSSVGNSPDRMGVQSLYSLRWNNHQAHIQQFFQELLHEENLVDVTLICAESSVKAHKVVLSACSPFFQRIFAENPCKHPVIVLKDFSNHELSTLIDFMYGGEVKIAQEELPGLMRAAECLQVRGLSSSEPRLVSEEPRPSSSSSTLLEFTTPEDARHDTPEEDDNTLENTRDIKPTLFQQTRDHPTKPLIGHMNFGIRESCSSPLMPRRKQARPRRRSGELLPQDLSRRSTPPASLSPLPSVLNLSGNQHQTQQQQQLQLQQSQYPQQQIISRNDQQQMINAQQSQQQQQQEDMAENLSMKKSMSPSGLDQHRVKTEDSEATSSPRGSPLTGTSLLHPDGSIQDIPTAVAAAVATVIPSISLSQTHPSEYLTSLNQLASQWLPGQSPLPPPPPQSHHSREDSPHGPGRSHPYQQQQQQESSIASRRTSMTMFTPLDGVTLGGGLFSHAGTYERTVLADSFLTDNFKQEALQNIFGAPNLVPPPKKMKKHRSDSDGTPRRWNDHNSRALAVNRPKGQHSAPRGGPPRSWTNNELTLALQHVWEKKLTTSQASRLFGIPYNSLLMYVRGKYGKSLKLEQLRRNCTGANTPEIMNNNNIKPVQQSAQMSHALTSLSLQHPGDNSGFASHRSLIGGNMPQPQSFYPAEYAAAPYPLPVNMVHLLPPSEQKTFESSANSSGDGSGCLGGGGDGNGGGDLTNSQTSETPSPIVDHHHHHQESSSSSSMQPQPTQSAPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00868979;
- 90% Identity
- iTF_00868979;
- 80% Identity
- iTF_00867553;