Basic Information

Gene Symbol
KDM5A
Assembly
GCA_949152495.1
Location
OX424449.1:12510435-12526775[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-25 8.1e-22 78.5 0.0 2 89 106 189 105 189 0.94
2 2 4.9 2e+04 -2.8 0.1 49 81 821 851 818 856 0.64

Sequence Information

Coding Sequence
ATGGGATCGCGGAGCAACGAGAGTCGTAACTGCGGGAATCATCAACGTTGCGTCCAAGACATGGCCTGCGATCGCGCCGAGAACGACTTTGAGTTCACGGTGCCGCCAGAGGCGCCGGTATTCGAACCCACCAACGAGGAGTTTCACGATCCGCTCGCCTACATCGCGAAAATACGGCCGATCGCCGAGATGTCCGGCATCTGCAAGATCAAACCTCCGCCCAATTGGCAGCCACCATTCGCCGTGGACGTGGACAAATTTAAGTTTGTTCCTAGAATACAAAGATTAAATGAATTAGAAGCTAAAACCAGGATAAAGCTTAATTTCTTAGATCAAATCGCAAAATTCTGGGAGCTCCAAGGTTCCTCCTTGAAAATCCCGCTTGTAGAACGTAAGGCACTGGACTTGTATTCCTTACATAAAATAGTCACAGATGAAGGAGGAATAGAAACTGTaacaaaagaaagaagatGGGCAAAAATTGCCAACAAACTGGGTTACCCATCCGGACGAAGCGTAGGCAGCATATTGAAGAATCACTAcgagagaattttatatccatttGATGTCTTCAAACAAGGAAAAACATTGTCAGATATTAAAATCGAACCAGAATCGGACGTGAACGAGAAGAGGGATCGCGATTATAAGCCGCACGGTATAATATCTCGACAGCAAATTAAACCGCCGAACGAGAAATTCTCGCGGCGATCCAAACGATATTCCGGCCAAGAAGAGAAGCAGGATGTATCAATTAAACAAGAGGACTGTAAGGAAGAGTGCGACTCGGACAACGAGTGCAAGGAAAGTAAAGTTGTTAAGAACAGGCATTTCAGTTTCGACACGGACAAGAGCAAGGAACTtaagaaattacaattttatggACCAGGCCCGAAAATGGCCGGTTTTAATACCAAAGAgggaaaaaaatctaataaaacaCGTGGCTTGAAACTCATTTACGATTTCGATCCTTTGGCAAAATACATTTGTCACAATTGTGGAAGAGGTGACAATGAAGAGAACATGCTGTTGTGCGATGGTTGCGACGACAGCTATCACACTTTTTGCCTTATGCCGCCATTAACAGAAATACCAAAGGGTGATTGGCGATGTCCCAAATGTGTTGCCGAAGAAGTCTCTAAGCCTATGGAGGCGTTTGGCTTCGAACAAGCGCAAAGGGAATACACGTTGCAGCAATTCGGAGAAATGGCCGATCAATTCAAAAGCGATTACTTTAATATGCCTGTTCATATGGTTCCAACATCACTGGTGGAGAAGGAATTCTGGCGAATAGTCTCGTCTATTGACGAGGATGTGACTGTGGAATATGGCGCTGATTTGCATACGATGGATCACGGATCTGGATTTCCGACCAAGACCAGCGTTAACTTATTCACCTGCGATCAGGAGTACGCCGAATCTTCATGGAATCTAAATAATCTACCAGTCTTACGTGGCAGCATCTTAGGTCACATTAACGCTGATATCAGTGGCATGAAAGTTCCTTGGATGTATGTTGGTATGTGCTTTGCCACATTTTGTTGGCACAATGAAGACCATTGGAGCTATTCCATCAATTATCTACATTGGGGCGAACCAAAGACATGGTATGGTGTGCCTGGCTCTCAGGCAGAGCGCTTTGAACACTCCATGAAGTCCGCTGCGCCAGAACTGTTTCACAGTCAACCTGATCTATTGCATCAACTTGTCACCATCATGAATCCAAACATATTGACAAGTGAAGGAGTATCGGTATTTAGAACAGACCAGCACGCAGGCGAATTTGTTGTGACATTTCCAAGAGCGTATCATGCAGGTTTTAATCAGGGTTACAATTTCGCTGAAGCCGTCAATTTTGCACCTGCAGATTGGCTTAAGATTGGACGAGACTGTATCACGCATTATTCGAATTTGAGGAGATTTTGTGTTTTTTCTCACGATGAGTTGGTTTGTAAAATGTCGCTGGATCCGGATTTGTTAGATATCGGTGTCGCAACTGCTACATATTACGATATGCTGCAAATGGTGGAGGATGAGAAAAAATTACGCAAAAACTTGCTGGAATGGGGTGTGACAGAAGCGGAACGTGAAGCATTCGAGCTTCTACCAGACGACGAGAGACAGTGTGAAGCATGCAAAACTACCTGCTTCCTGAGTGCAGTTACATGCTCGTGCCACAACTCGCAATTAGTTTGCTTAAGACATTTTGCTGATTTGTGTACCTGTCCGCCGGAGAAGCATACATTGCGTTATCGGTATACATTGGACGAATTACCGATCATGCTGCAGAAATTAAAACTGAAGGCTGAGTCATTTGACTCGTGGGTGACTAAAGTGAAAGAAGCCATGGATCCCAagaatgataaaattgaaCTGAGCGAATTGAAGGAGCTCCTTAATGAGGCCGTGAacaaaaaattccctgagagtGAATTACTCACAGCTTTAACCACCGCTGTACAAGATGCTGAGAAGTGTGCAAGTGTCGCACAACAGCTATTGAACAATAAACAGCGTACAAGGACTAGGCAAACAGTTGATACCAAGTATAAACTCACCATAGAAGAATTAACACTTTTCTATAAGGAGATAACCAACCTGTGTTGTGAACTTAAAGAATCGGATGGCGTAAAGTTTATACTCGACCAAGTATTGCAGTTTCAAAAAGATGCGGAAGATCTGGAGTCCAAAGATGAAGATTGTGATATTGAGAAATTGAAGAAATGTATTGACTTTGGAGACTCTATCTACATTGATCTGCCTCAACTCGTACTAATGAAACAAagattAGCACAGAAACAGTGGTTAGAGGAAGTAAAATCCCTCCAAGACGACCCGAAAGCTGTCAGTCGCGAAGAGGTGGCAAAATTAATCGAGAAAGGCATGATGATACCGCCTCATGTCAGTATCGAAAATACGTTGGCGGAATTGCACGCGTTAACGAAAGCAATTGATAAGTGGGAAGAGAAGGCCAAGATATTTCTTCACACGAAAAATAGACGAACTATTGCCACTGTGGAAGAGTTTATTCGCGAGGCAGATGAAGTCGAGGCATACTTGCCGAGTTTGGATAGTCTTCAAGACACACTGAACAAGGCGAAGAATTGGACGAAGCTCGTGGATGACATACAAGCAAAAGAAAACTTTCCATATTACGACACTCTAGACGATTTGATAAGGAAGGGTAGAAATATCCCGTTGCATCTGGACGCCCTTCCGATGCTGGAATCTACGCTCTCGCAGGCGAAAGCATGGAAAGAGAGAACTGCGAGAACATTCCTGAGGAAAAACTCTCATTATACATTGATGGAAGCTCTATCCCCGCGAATTGGCGTCGGCGTGCAAGCGATGAAGACTAAAAAGCATAAGGGCGACGAGTCCGTAGGGGCTGTTTATGTCTGTGATACAAAATTGGACGACTCCAGTGATTCGGCGAACGTGGTCGCTGCCTTTAAGCTAGCGGAACAGCGCGAGATGGAGGCAATGAGAAGCTTGAGGGAGAGAAATTTGATGAAGATAAAAGCCGATGTGGAAGATTCCAAATATTGCGTATGCCGGCGACCAAGATTTGGCATTATGCTTCAGTGCGAGCTTTGCAAAGATTGGTTTCACAcaAACTGCGTGCCTTTGCCCAAGACATCGTACAAGGGTAAACCAGGTCCGAGGGACATAAAATTCTTGTGTCCATGTTGTCTACGTTCTCGACGACCTCGTTTAGAGACGATACTGGCTCTCTTAGTGAGTCTCCAAAAAATTCCGATTCGATTGCCGGAGGGAGAAGCGTTGCAATGCTTGACTGAACGTGCAATGAATTGGCAGgaTCGAGCGAGACAAGCATTAGCCACTGAAGAGATCTCGTCGATATTAGCAAAACTTTCTGTGATGTCGCAAAAATTAGTTGAAGCagcggcgagagagaaaacggaGAAGATAATCAGCAGCGAGTTGAAGAAAGCAGCAAATAATCCTGAACTGCATCAAAGAGTGCAAGCCATTGCGCCTCTCAGCGGAGTGCATTCAGACGATAGTGCTCTTAGTACTGCTGATGACGATGATGATGTCATTGCTATGGATGACGAACCAACGTGTAGTACTTTCAACAGCAACGAACATGCATATTCATATATCTCAAAAATTCGGCGAAAAACTCAATCGGATGACAGCGGTAGCGAATCGTTTGGCTTATTATCGTCAAACGCGAGATTACGTTTGGAGGAACTGATGATGGAGGGCGATTTATTGGAAGTTGCCTTGGACGAGACGCAACATATCTGGCGTATCTTAAGTCACATGAATAATCATAATACCATGCGAAAGTATAAGTCATTCGAGGAGGTTCAAGTAAATGCGAATCAAGAGATGAAAGACATAAAGAAACGGGGGAGGAAGCGGAAGGAGGAATTCGagttgttgaaaaaaattggacggcagaaaatcgaagaaaaaaacGCAGTTAAACGTAACAAAAACATTCCTATCATTAAGGAGAAGAGACAGAGCAGTTCACCAGTTCCCATGAAACGTGGACCGCGTAAGATGAAACGCAAGAGTGAGGGTGAAGAAGGTCCTAGGAAGCGAGGTGGTAATCGCACGAAAAAAACCAAGCAAGAAAGCTCAGATGAAGAGGATGATTGCGCGGCGGAAAACTGCTTGCGGCCTAGTGgTAAAGAAGTTGATTGGGTTCAGTGTGATGGTGGCTGCGAAGGTTGGTTCCATATGCATTGTGTCGGTTTAGATCGCACAGAAATCGCTGAGGAAGACGATTATATTTGTAGCAACTGTAAAGAAGTCGATCAAAATGCATCGCCCCAGGGGTACCACGGCAGCATCACCGACACTGAAGCGGGCGTCTAA
Protein Sequence
MGSRSNESRNCGNHQRCVQDMACDRAENDFEFTVPPEAPVFEPTNEEFHDPLAYIAKIRPIAEMSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLSDIKIEPESDVNEKRDRDYKPHGIISRQQIKPPNEKFSRRSKRYSGQEEKQDVSIKQEDCKEECDSDNECKESKVVKNRHFSFDTDKSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGLKLIYDFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVSVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCITHYSNLRRFCVFSHDELVCKMSLDPDLLDIGVATATYYDMLQMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHNSQLVCLRHFADLCTCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKNDKIELSELKELLNEAVNKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQTVDTKYKLTIEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKDAEDLESKDEDCDIEKLKKCIDFGDSIYIDLPQLVLMKQRLAQKQWLEEVKSLQDDPKAVSREEVAKLIEKGMMIPPHVSIENTLAELHALTKAIDKWEEKAKIFLHTKNRRTIATVEEFIREADEVEAYLPSLDSLQDTLNKAKNWTKLVDDIQAKENFPYYDTLDDLIRKGRNIPLHLDALPMLESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKKHKGDESVGAVYVCDTKLDDSSDSANVVAAFKLAEQREMEAMRSLRERNLMKIKADVEDSKYCVCRRPRFGIMLQCELCKDWFHTNCVPLPKTSYKGKPGPRDIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATEEISSILAKLSVMSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSTADDDDDVIAMDDEPTCSTFNSNEHAYSYISKIRRKTQSDDSGSESFGLLSSNARLRLEELMMEGDLLEVALDETQHIWRILSHMNNHNTMRKYKSFEEVQVNANQEMKDIKKRGRKRKEEFELLKKIGRQKIEEKNAVKRNKNIPIIKEKRQSSSPVPMKRGPRKMKRKSEGEEGPRKRGGNRTKKTKQESSDEEDDCAAENCLRPSGKEVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEVDQNASPQGYHGSITDTEAGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_01077253;
80% Identity
-