Basic Information

Insect: Lasioglossum zephyrum
Gene Symbol: -
Assembly: GCA_028455615.1
Location: JAQQRZ010001093.1:1-4928[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.6 7.5e+02 1.1 1.0 1 12 384 395 384 401 0.77

2 18 0.00026 0.023 15.3 1.3 1 23 478 501 478 501 0.96

3 18 0.0024 0.21 12.3 0.7 2 23 534 555 533 555 0.94

4 18 0.56 49 4.9 1.8 1 22 692 713 692 713 0.95

5 18 0.063 5.5 7.8 1.3 1 19 720 738 720 740 0.93

6 18 1.7 1.5e+02 3.3 3.0 1 22 753 774 753 776 0.89

7 18 6 5.2e+02 1.6 0.1 2 19 799 816 798 819 0.89

8 18 0.09 7.8 7.4 2.8 1 23 826 849 826 849 0.93

9 18 0.084 7.3 7.4 2.0 1 23 860 883 860 883 0.89

10 18 0.37 32 5.4 0.1 1 21 916 936 916 937 0.94

11 18 8.8 7.7e+02 1.1 1.5 1 23 944 967 944 967 0.87

12 18 7.9 6.9e+02 1.2 7.3 1 20 976 995 976 999 0.86

13 18 0.00053 0.046 14.4 0.3 1 20 1029 1048 1029 1050 0.95

14 18 0.0065 0.57 10.9 1.6 1 23 1057 1079 1057 1079 0.98

15 18 0.0013 0.12 13.1 0.5 1 23 1089 1112 1089 1112 0.94

16 18 0.0047 0.41 11.4 0.1 2 21 1149 1168 1148 1169 0.93

17 18 0.00014 0.013 16.2 4.2 1 23 1176 1198 1176 1198 0.97

18 18 7.5 6.6e+02 1.3 0.7 1 23 1207 1230 1207 1230 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.6	7.5e+02	1.1	1.0	1	12	384	395	384	401	0.77
2	18	0.00026	0.023	15.3	1.3	1	23	478	501	478	501	0.96
3	18	0.0024	0.21	12.3	0.7	2	23	534	555	533	555	0.94
4	18	0.56	49	4.9	1.8	1	22	692	713	692	713	0.95
5	18	0.063	5.5	7.8	1.3	1	19	720	738	720	740	0.93
6	18	1.7	1.5e+02	3.3	3.0	1	22	753	774	753	776	0.89
7	18	6	5.2e+02	1.6	0.1	2	19	799	816	798	819	0.89
8	18	0.09	7.8	7.4	2.8	1	23	826	849	826	849	0.93
9	18	0.084	7.3	7.4	2.0	1	23	860	883	860	883	0.89
10	18	0.37	32	5.4	0.1	1	21	916	936	916	937	0.94
11	18	8.8	7.7e+02	1.1	1.5	1	23	944	967	944	967	0.87
12	18	7.9	6.9e+02	1.2	7.3	1	20	976	995	976	999	0.86
13	18	0.00053	0.046	14.4	0.3	1	20	1029	1048	1029	1050	0.95
14	18	0.0065	0.57	10.9	1.6	1	23	1057	1079	1057	1079	0.98
15	18	0.0013	0.12	13.1	0.5	1	23	1089	1112	1089	1112	0.94
16	18	0.0047	0.41	11.4	0.1	2	21	1149	1168	1148	1169	0.93
17	18	0.00014	0.013	16.2	4.2	1	23	1176	1198	1176	1198	0.97
18	18	7.5	6.6e+02	1.3	0.7	1	23	1207	1230	1207	1230	0.85

Sequence Information

Coding Sequence: CTTCTTAATGGGGTACGGGTGAAACAAGAACCACGTGACACGGATGACAAAAGTCAGGACTGTACTTTGAAATTTATAAATTCGAATGTAAAGATTACTACATCAGGTGAAACGATTATTGAAGGGACACAATTGGTGGACGTTGTAAATAAGAAAGAGACTGAGCTTGTATCATCTAAAAACCGTGCCGGTATAGTGAAATCGGATACGGACGTGACCAATACGAAGAAACGTAAACTTTTAACATTTGAGAATTTGAAAACACCGGAAACGGTGCCTGAGCAAGAGTCGCGACAACACAAAAGGGCCTGCCGCAGTAGCGTTGAACGTATATTTACGGAACGGGTAAGGAAAGAATTAGGAATTGCGAACGTTGAATGCGACAACATTGAAAGTGGAGCCAGCGAAACTGATAAAAACAATAAAATTGATACGACTAAAGAAACCGATAAAATCAGTAACCCGCCATTGACAGAGCGCACTGACGGTCACGTAAAACATCCTTCTGCACAGCAGGAAAGAAAGAGTCCAGCTGATAATCTTACAAATAAAATGAGACAAACAACTATGATAGAGTTCCTTTCAGGATTCACGAGGAATGAACACATTTCTCCGAACAAGATTGAACCTACAAGAGAAACTCCAAAAAAAGTAAGTTCCAAACAATTAGAAAGAATAACGGAGAAAGTAGAGGAGACACCGAAAAAAACCACAGTCAAGCAAAATGGAACAATAACAGAAATATTCGATTTCCTGGCAGATGCTCAGAAAAAGGTTAGACAAAACGGAGCAATAGCAGAATTCGTTTCCACTCCGCAGAATGAGAAAGCGCCGACTATTGATGAAAGTTATGGTTTACGTAGCAGATCTAACAAGAAGAAAAAACTATTATTCAAGATAAACATGGGTTGTGACGACATGATGGCCTTATTGCATAAAAAAATCAAAATCGAATCAAAAGATGAATATCCTATACCACGGAATGAATCCTATAACTTTAGACGCGTGACAAGAAATAGTCGTGATCAACCACCGAGTGACGTGAATACACGGTTTCCAGTTAATAGAAAACGTTATGCTAAAGGGCAGTTCACTATCCACTCTAAACAGATATCGCCTCGGTTGAAGGTGCAACAACTGAGAGCTAAGTTCAAATGTAAAGACTGCAAAGTTAATCTAGTTAGATGCGACTCGGTTGTCAAAACAGAAATTGTCGATTATGTCCCGTCAACTCCGGTAAACGTATATGATGATATCGAGGAAGTTTGGAGAAAGAAGGTTAACTTAAAGAGAATCCACGTTCCATTGATCAAACTGAACAATCCAATAAAAGAAAAAGGTAACGATACGTTTCAATCATCAAATCGAGACAACAATCCTAAGAAAACCAATGCATCTCAGTTTAATGTTAAGGCTAAATTGCGCAGGATATTCCGGTGTAAAGTCTGTTGGAAATACTTCTCCTCGAAGGAGAAGTTATACGAGCATTTGGAAATTACTCATGTGTCCTACATATCGAGCGTATGCAGTGCTTGGTACAAATCCCGAGTCAGATTGCTGAGACACTATTTGCATCAGCACTGCGTCATGAAACGCATGGAGTGCTGCGTGTGCTTCGAGAAATTCGTGTCGCCTGTGTTGTTGAAGCGGCACATGGGTCTGCACTGCATCAAGGTGTTTCAATCGAAGAGCGATAAGCTGTTCAACAAAGAGGTGGTCAAATGTAATGTGAACACTAGGGCGAACTCGTGCAGTGCGTGCGGTAAGCAATTTTGGTTGGGGGCTTGCTTAAGCGAACATCAACAAGTGTGTCAGAAGATCAAGGTGCAATTGCAGAAATTACAGATAGCGCAGTGTCCCGTTAAAACGTCCTCAACGAAAAAAACGCTTGAGTCACCGTTGGCTATTGCAAGCGGTACAGTGACCGAGCAGCACCCCATCAAGTTATCCCCTGTCAAAAATCATCCTCGTAGAATCGAATCACCGTCAGTAGCACTGCACAAAAGATTGCTGAAAGGCGTTGCGTTCTCGAATGGGTACAACATCTACAATATCAGCACGAGCAAAGAGAAGTTTTCCTGCACCACTTGCGGAGTGCAATTCCTGACTTTCCAGAATTTATGTTTGCATGAACGCACTTTCACTAAAGCTGCAAAGTTCGTCTGTGGGTGCTGCAATACCGCCTTCACCACACAGAAATTATTGCAGAACCACTTCATAGCCACCTACTTGCTCGACAATGGAAGGAAGTTCAAGTACTTTTGCACTTTCTGCACACAGGGCTTTCTAAAGAAGGCCAATCTTCAGATCCACACGGGACATTTCCACCGTGGTCAAACGCCCATCATTCCCAAACCGTGGGTGGATACTACTTCCAACTGGGAGGTGAATACGGTGTGCAGCGTTTGCAATTTGTTATTCGAGTCCAGCGAACGGTTCATCGAGCACAACATGTACTATTACAAGGGACAGACATTTACCTGCACGTTCTGCAATGAAACCTTCCAGGGAATGTACATGCTGAACCATCACAACAAGTTGGTTCATTACACGGAGGACATGACGAAACAGTACAcgtacatgtgcgacatttgcaacgagggcttcacccaggagtccaAACACCAGGCGCATAAATTGCATGTTCATTCGGCATTATCTGAAACCGACACACAGTCCCTGCAAGATCACATCTACGCCATCACGATTGGGATGGTAGGATTGACGAATGGACCGACGATGAAATACAACTGTGAGGTTTGCTACATGAACTTCATGGCCGAGGAGGACCTACAACAGCATCAGTTGGAGTACTCCAATACTGGTGACTACCTATGCAGCTACTGCGCCAGAAAATGTCCTACGGACAGCATCCTCAACAAGCACGAGAGTTTGTCACACACCGGTGGTAATTTCACCAACTACTACAAGTGTCACTACTGCGAGGAGGTGCTTTCCACGTGTACCGCGTTGAAATGCCATGAAATACACTTCCACCAAAAGATCTCTAATCCCCAGAAGAACAGCGATAATCAGTTAATTGCGAATCGGAGTGCCAAACCACCTGGAAACAATAGAGACCCATTCGTCTGCACGGTTTGCGACATGACGTTCGTAACCTTGGAGAAATTGAACCATCATACCTTAGAATTTTCGAATGTCGGTCGGTACAGTTGCTACATCTGCAGCCGGAGGTTCTCGGAGCTGTATCGCCTAGAAGTCCACAAGCTAAAGCACTCGAACTTGAACTTCATACTGTCTAAGTATCACTGCCCCATATGTCGCGAGGGATTCGCAAATCCAGCCAACGTTCGTGCGCACGAGATGCATTTCCACAAAAGCTCAGCGACCGATCAGTTGGTACCAAAGGACGCGCAGACCTTGCAGGCAGTCGGTCTCAACGTCGAGAGGGGCTCAAACAGTCCGGCTAAGACGAAGTCGACAATGTGTCCTGACTGTTTGGTATCGTACGATTCCGAGAGTAGTTTGAAAAGACACCAATCACGCTTCGTGAACGAAGGACGACATGTGTGCGAGTACTGCGGCAGGAGgttcaaattcatgaagctgctgacgcaacatttgaagaggcatacTGAAGGCATTGAACGCCTGAGGTACGCGTGTTCCGAATGCAAGGATAGATTTGGTAATCAGGTGGCCAAATATCAGCATATCGTTCATCTTCATGGAAAGAGTAAGTGGAAAGGCGACGTACCTAATTTCATAAAGACTCGCCATGATGCTAAAGCTACTGCTAAAAAATTAGATATCAATACATCATTGCTTCAATCAGAGACCTCACCATATTACATTAGTAAACTTATTACTACAGCCAGTCCCGTGAGCAGATTAAGCGATGGTGAGGGAAGGTCCTCATCATCAACTGATCAGCTGATTTCCGCTGGCGAACCTGTGGCTACAGCCAGCCCCGTAGACGGATTCAGTGACGGTCAGGAATGA
Protein Sequence: LLNGVRVKQEPRDTDDKSQDCTLKFINSNVKITTSGETIIEGTQLVDVVNKKETELVSSKNRAGIVKSDTDVTNTKKRKLLTFENLKTPETVPEQESRQHKRACRSSVERIFTERVRKELGIANVECDNIESGASETDKNNKIDTTKETDKISNPPLTERTDGHVKHPSAQQERKSPADNLTNKMRQTTMIEFLSGFTRNEHISPNKIEPTRETPKKVSSKQLERITEKVEETPKKTTVKQNGTITEIFDFLADAQKKVRQNGAIAEFVSTPQNEKAPTIDESYGLRSRSNKKKKLLFKINMGCDDMMALLHKKIKIESKDEYPIPRNESYNFRRVTRNSRDQPPSDVNTRFPVNRKRYAKGQFTIHSKQISPRLKVQQLRAKFKCKDCKVNLVRCDSVVKTEIVDYVPSTPVNVYDDIEEVWRKKVNLKRIHVPLIKLNNPIKEKGNDTFQSSNRDNNPKKTNASQFNVKAKLRRIFRCKVCWKYFSSKEKLYEHLEITHVSYISSVCSAWYKSRVRLLRHYLHQHCVMKRMECCVCFEKFVSPVLLKRHMGLHCIKVFQSKSDKLFNKEVVKCNVNTRANSCSACGKQFWLGACLSEHQQVCQKIKVQLQKLQIAQCPVKTSSTKKTLESPLAIASGTVTEQHPIKLSPVKNHPRRIESPSVALHKRLLKGVAFSNGYNIYNISTSKEKFSCTTCGVQFLTFQNLCLHERTFTKAAKFVCGCCNTAFTTQKLLQNHFIATYLLDNGRKFKYFCTFCTQGFLKKANLQIHTGHFHRGQTPIIPKPWVDTTSNWEVNTVCSVCNLLFESSERFIEHNMYYYKGQTFTCTFCNETFQGMYMLNHHNKLVHYTEDMTKQYTYMCDICNEGFTQESKHQAHKLHVHSALSETDTQSLQDHIYAITIGMVGLTNGPTMKYNCEVCYMNFMAEEDLQQHQLEYSNTGDYLCSYCARKCPTDSILNKHESLSHTGGNFTNYYKCHYCEEVLSTCTALKCHEIHFHQKISNPQKNSDNQLIANRSAKPPGNNRDPFVCTVCDMTFVTLEKLNHHTLEFSNVGRYSCYICSRRFSELYRLEVHKLKHSNLNFILSKYHCPICREGFANPANVRAHEMHFHKSSATDQLVPKDAQTLQAVGLNVERGSNSPAKTKSTMCPDCLVSYDSESSLKRHQSRFVNEGRHVCEYCGRRFKFMKLLTQHLKRHTEGIERLRYACSECKDRFGNQVAKYQHIVHLHGKSKWKGDVPNFIKTRHDAKATAKKLDINTSLLQSETSPYYISKLITTASPVSRLSDGEGRSSSSTDQLISAGEPVATASPVDGFSDGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00866316;
90% Identity: -
80% Identity: -