Basic Information

Gene Symbol
RERE
Assembly
GCA_028455615.1
Location
CM052326.1:13105981-13115057[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.7e-08 3.8e-05 23.9 0.2 2 45 129 173 128 174 0.88
2 2 6.7 6.8e+03 -2.5 0.0 25 36 744 755 743 761 0.60

Sequence Information

Coding Sequence
ATGTCTGCCGGCACCCAGGGCGAGATTCGGGTTGGCCCTTCGCACCAGGAGTTGGTTTCTTGTCAGGCCCGTTTGCCTGAGTATCGGCCGGGTATACCTCCTGGAGAGCTGCTTCCTGATCCAGAGTTTTCTAAAGAACGAGAAGAGCTAAGATGGATTCCAGCTATGGCATTAGACGGGGATCTTCTGATGTACTTGAGAGCAGCTCGATCTATGGCTGCATTTGCTGGCATGTGTGATGGAGGATCCCCGGACGACGGTTGTGTGGCTGCATCCCGAGACGACACGACTATCAATGCTCTGGACATCTTGCACGATTCTGGCTATGATCCAGGAAGAGCGTTGCAGGCTCTCGTTAAATGTCCTGTACCTAAAGGCATCGATAAAAAATGGTCAGAGGAGGAAACTAAACGCTTCGTCAAAGGACTCCGTCAGTTTGGAAAGAACTTTTCGAGAATCAGAAAGGATCTCTTGCCCCATAAAGACACGCCGGAATTGGTCGAGTTCTATTACTTGTGGAAGAAAACGCCCGGTGCAAACAATAATCGACCTCATCGAAGAAGGCGACAAGGCTCGCTCCGAAGGATTCGGAACACTCGCAACTCGAGAGCCGGTACGCCTAAAGAAGAGGTCCCAACGCCGCCAAAGGACACTCCACCGGCCAACGTTAGTCAGAAGGAGCCGATTTCAGAGCCCGAGACCGTGCCGGTTGGAACGCCTGCTAGCAACAATCCCGGCGGGGAAATTAGTTCTGTGACAGAGGACGATAATTCGGAGGAGGACAGCGACTCTAGAGACACCAACACCAACGGGGCAACGCACTCTTGTCAGCACTGCTTCTCGACCAATTCGAAGGACTATCAGGTAGCCGGCAAGGACAGATTATTGCTTTGTACGGAATGCAGAATACATTTGAAGAAAACCGGAGAACTACCGCCAGCCCCTCCATATCTGTTCCGCCCTGTGCCCGCGGAATCACCAGATAGCCCAGGGAGAATGCGTACAAGAAATAAGGCTAAGGAAACGCCTAGACCCGCAAGACCTCGACGTACAGGTGGAACGGATACTCCTGATCAAGAGAAGCAACAGCAACATCATCAGCAGCAACAACAACAGCAGCAACAGCAACAAACGCCAGATAAGAGTAAGAAAAAATCGTCCGGCGGTGGTAAACCAGAGACACCGAAGAAAGGTCAGAAACGGCCTCAAACGGACGAAGTCGACGAGGACAAGGAATCTCAAAAACGAAAACGCGGCGAACGTCCTGAGAGTCCATCCGAGTCGCTGACGACCGATAGTAACTCTCTCATGGATGAGCCTGAAAGGGAAGGAGAAGGCGATACGAACGAAAATCAACCCACTGCGGTTACAGTGCCGACCGAGGAGCCTGTCAGTCCAGCTGTGACCACGCCGGAAGAACCTTCGGAACCGACGCCGGTGTCCACTCCTGTACCAGCACCTATACAAACCCTGCCGATATCCGTTCCTGTTATTCACGCTTTGGAGAAGAAGCCGCTGCTGGAAGATCCGGTGGAGAACAAGGATCATCCGATAGAAGATGTACCTTTAGCTATGAATCAGCCGTTAAAGTTAGAACCTCTGCCTATAGAGTTAGCCATGTCGCCTTGCAACGAAGATACCAAGGAACCCGAACAACAACAGCAGCAGCAACAACAACAGCAGCAGCCGCAACAACTCAACTTGAGCACATCACAACCATTGAACATGAACGACATGAGCCAGAACATGCCACGGAATTTATCACAAACGATTCAGAGTGGTGGTATTTGCGGGTCGACCGGTCCACAGGGGATACAGAACGCACAGATCATGTCTCCGACGCAACAACCACTACCGCTGAACATGCAGTACGCGTCCAACGTTCCTCCAGTTCAAAATGTTCCGCAAAACTTGTCGCAGAGCATGCAGATGCCGCAGAATATGTCGAGCGCGCAGAACATGGGACCAACGCAGAACCTTCGAGCTCACGGGGAAAGCATGTCAAACGGGCAGAATCTGGGTCAGAACATGGGCCAGACCATGTCTCAAAATATGCCGGGACCACCGTTGAACTTGAACATTTCTCAAAGTATACCGACGAACATGTCTCAGATGCCGCAAATGCCGAGTTCGCCGCAACCTCTAGGCTTAACGGTGATGTCATCTGAGAGTAGACTGTCCGAACGAATTTCCGACGATCGACTCGGTCAAGAACGAATGCGAGACAGCAGGATACCGGAAAGGATGCCCGACAGGATACCAGAGAGAATTCCGGATCGATCGATACCGGAGAACAGCGAGTCCGAGAGAAACGAGCCGAGCAATCTGTTCCAGCCAATTCAACCGAGTGGGATGCTGCCGATGGAGAAGCCGTCATCGATGTACAATTTGGCTGGTACGCCGCCCATGGAGCCGCAAAACTTGAAAATCAAACAGGAGATCATTCCTCCGGAACCGGATCCGTTACAGAGCTTGAAAGAGGTGAAAGTTCCCGGATTTCAATCCGGATTTCCTGGTCCGAGTTTGGAGAACATCAAGAAGGATCCGGACAGTTCGAGCAAACCTCCGACGCCGAGCAAACATTCGATGGCCAGCAATCAAGCTGTCCCTCAAATTCAGTCAGTAGCCGCGTCTCCGACTCCGACGCTTCCGCCGCCGCCCACGTCGATTCCTCAGCCGGTGATGCATCCCGCGCAACAGCCGAGCCCGCACATGGCCCATCCGTTCCATCCTCATCATCCTCTGATGCACCATTCGCTATTTACTCCTATGCACCCGTACCATCCGCACGCGTACCCGGGATACGCTGCTGTTGGAGGATATCCCTCGTTCCCGCCGTATCCGTACGGACCAGTGCCGCACGCGATACCACCGCCATCGCCGCAGAGGAGTCAGGAGAGCACCACCATGATGACAGCACACCATTCAAGCACCAGTTCGAGTGTGACCACTAGAGAGGAAGGGGAGAATCTGATCGCCACGCATCATCATTCGTCCAGCATGCACCAGGCGACGGCGCTTCACCACGACAAACTGTTGACCATCTCGTCGCACAGTTCTCATAGTCACTCGTCGTCGCACAGTTCGCACAGTTCGCACAATACACAACGGAAGCCGTCGCTGGTCTCGGCGACGTGTTTGACGTCGAGCAGTTCGGCGCACCATCATCACAGGGCGCCGCAACCGCAACCGCAGCCGCCAGTTGTCCCGGAGCCGAAGATCGAGCCGGATCTGGTCGAGCAGGAGCAAGAGGAGCCACCAAGCCCTCGAGGTCCTTCCCCGGAACCGAGGATCGAGGATTCGGAATGCCACAGATCGCAGTCAGCTATTTTCCTGCGGCATTGGAACCGGGGCGAGAACAATTCGTGCACGAGGACGGATTTGATGTTCAAGCCAGTGCCGGACTCGAAGCTGGCTAGAAAACGAGAGGAAAGATCCCGCAAGCAGGCCGAAAGGGAAAGGGAGGAACGAGATAGAGCCGCCGCCCAGCAAGCCAGGAAGATGACCACGCCGGAAAAACAGCCGGAGGTCTGCAAACCGCCGAGCAGAGGACCCCTCGAGCCGGTGGTATCGCCGTACGACAGGTACGCGGCTGCGGCGGCCGCTGCGGCAGCCAGGCCCGGCTCCTACGCCGACACTCCTGCGCTCAGACAGTTGTCGGAGTATGCGCGACCGCACGCCGCCTTCTCCCCGGCCAGGCATCCAGCCCCACCGGATCCGATGCTGCACTACATGTACGGAGGAGCAGCGACGAGGGAACGCCTCGAGTTGGAGCACTTGGAGCGCGAGAAGAGGGAACGCGAGATCCGGGAGCTCCGTGAAAGGGAACTGAACGACCGGCTCAAGGAGGAACTGTTAAAAGGAACGCCGAGACCGATGCCAGGACCAGTCGATCCGCACTGGCTCGAGATCCATCGTCGTTACGCCGCAGCAGGCCTAGCGCCAGGCCCCTCAGGACCCCCTCAAGCTCTGCACCAGTTTGGCCTGTACGGTGCACCGCCCGGTCCGAGTCAACTGGAAAGAGAACGTTTAGAAAGACTAGGGATACCGACTGCAGCCGGCGGGGGGCCAGCGGGTGCGGGGGCTGGCCATCCCGTGGCGGCTCATCACCACGGCCAGCTGGACGAGCGACTGGCTCTAGCTGCTGACCCGATGGTCCGGTTGCAGATGGCTGGCATTTCGCCCGAGTATCATGCTCACACTCACGCGCATACGCATGCGCATACGCACTTGCACTTACATCCGGGACAGCAGCAGGCCCAGCAACAGGCTCAGCAACAGCAGGAAGCGGCTGCGGCTGCGGCTGCAGCTGGATTCCCCCTGCCTGCCGCAGCCGGTGCGAATTACCCTCGGCCAGGATTGATGCCGCGTGATCCAGGATTGGCCCTTCATCCGGCGGAACTTCTCGGAAGACCATACGCCGATATGGCAGCTCACCACGAGCAATTCCAGCGTCACCTGATGATGGAACGCGACCGATATCAGCCTCACGCGTCACTCGTTGCCCATCACGAGGAATATCTAAGACAACAACGCGAGCGCGAGCTTAAAGTGCGCGCACTGGAAGAAGCTGCACGTGGATCACGCCCTTAA
Protein Sequence
MSAGTQGEIRVGPSHQELVSCQARLPEYRPGIPPGELLPDPEFSKEREELRWIPAMALDGDLLMYLRAARSMAAFAGMCDGGSPDDGCVAASRDDTTINALDILHDSGYDPGRALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFSRIRKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQGSLRRIRNTRNSRAGTPKEEVPTPPKDTPPANVSQKEPISEPETVPVGTPASNNPGGEISSVTEDDNSEEDSDSRDTNTNGATHSCQHCFSTNSKDYQVAGKDRLLLCTECRIHLKKTGELPPAPPYLFRPVPAESPDSPGRMRTRNKAKETPRPARPRRTGGTDTPDQEKQQQHHQQQQQQQQQQQTPDKSKKKSSGGGKPETPKKGQKRPQTDEVDEDKESQKRKRGERPESPSESLTTDSNSLMDEPEREGEGDTNENQPTAVTVPTEEPVSPAVTTPEEPSEPTPVSTPVPAPIQTLPISVPVIHALEKKPLLEDPVENKDHPIEDVPLAMNQPLKLEPLPIELAMSPCNEDTKEPEQQQQQQQQQQQPQQLNLSTSQPLNMNDMSQNMPRNLSQTIQSGGICGSTGPQGIQNAQIMSPTQQPLPLNMQYASNVPPVQNVPQNLSQSMQMPQNMSSAQNMGPTQNLRAHGESMSNGQNLGQNMGQTMSQNMPGPPLNLNISQSIPTNMSQMPQMPSSPQPLGLTVMSSESRLSERISDDRLGQERMRDSRIPERMPDRIPERIPDRSIPENSESERNEPSNLFQPIQPSGMLPMEKPSSMYNLAGTPPMEPQNLKIKQEIIPPEPDPLQSLKEVKVPGFQSGFPGPSLENIKKDPDSSSKPPTPSKHSMASNQAVPQIQSVAASPTPTLPPPPTSIPQPVMHPAQQPSPHMAHPFHPHHPLMHHSLFTPMHPYHPHAYPGYAAVGGYPSFPPYPYGPVPHAIPPPSPQRSQESTTMMTAHHSSTSSSVTTREEGENLIATHHHSSSMHQATALHHDKLLTISSHSSHSHSSSHSSHSSHNTQRKPSLVSATCLTSSSSAHHHHRAPQPQPQPPVVPEPKIEPDLVEQEQEEPPSPRGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDSKLARKREERSRKQAEREREERDRAAAQQARKMTTPEKQPEVCKPPSRGPLEPVVSPYDRYAAAAAAAAARPGSYADTPALRQLSEYARPHAAFSPARHPAPPDPMLHYMYGGAATRERLELEHLEREKREREIRELRERELNDRLKEELLKGTPRPMPGPVDPHWLEIHRRYAAAGLAPGPSGPPQALHQFGLYGAPPGPSQLERERLERLGIPTAAGGGPAGAGAGHPVAAHHHGQLDERLALAADPMVRLQMAGISPEYHAHTHAHTHAHTHLHLHPGQQQAQQQAQQQQEAAAAAAAAGFPLPAAAGANYPRPGLMPRDPGLALHPAELLGRPYADMAAHHEQFQRHLMMERDRYQPHASLVAHHEEYLRQQRERELKVRALEEAARGSRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00633569;
90% Identity
iTF_00865255;
80% Identity
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