Basic Information

Gene Symbol
osa
Assembly
GCA_028455615.1
Location
CM052327.1:5989994-6005349[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.1e-25 1.4e-21 76.9 0.0 2 89 858 945 857 945 0.92

Sequence Information

Coding Sequence
ATGGCTGCGACGCAAGCCGAGAGCCAACAAAACGATGTGAAGCTGAACGAGTCCGTGAAATGCGCACAGAAACGTCCGCAAGTCGGTGGGAATAGTGCGAGTGTTAACGCGAAGCAGCAGCTGGATCCAGAGCCGGGTGATAAAGTGCCCCGGGGCGCGGCCCAGCTGCTTAAATATGTGAATCGCGGCGGGGACACGGGTTTCGAGATGAGTCAATACCGCGAGGACATTGGTGGACACACTGCCGGTGAGGTAAAATCACCCAGAGAGGCTGGCCAAGCGCCTCAAGAATCTATCGGCAAGCAGGAGCCTCTCGACGCGCCCGGTCATCCGAACCATCCCGGACATCCGTTCACGTCGAACGTAATACGCGACTACTCGGACGAGTATACTAACAAATCGAACGAGTTTCCCTCCAAGTCGTTGACCGATTATCCGGCCAAGCAGATACCGGAATACGTGGGAAAGCATGGAGATTTTCCAGGGAAACAATTGGAGTATCATGGTAAACACTTAATACATGAAAGCGAAAGAGTCCACCGAGCAGACATGGAAGAGCATTATGCAGCTTCCAAGATTGAATCCCGATTGGCATACGTAGGGGCTACACCGACCAGCTTCCCGGGTCAGCCAAGGTTTCTGTCTGGCCAAAGTATATCGCAAGCCACTGGCCCGACCCCAACGTTAAATCAGTTGCTTCAAGCATCTACGCCAGTGCATCGGTTTCATGGAAATTATCCTGGCATGGGACCGGAGACTTATCAACAACCCTGGCCTATTCAACGACCACCGGTTGTTCCTCCAGTTTATCCTCAACCTGGTCAACGACCACCACAGACGGGGTCACCAAGATTACACGCTGGGCCTGGAGGACCAAGTTCTCCGACTCCTATGCCATATCAACAATACACGCAACGTTATTCTTCTCCATCGAGACCCCATGCGCCGTATACTCACCATCAGATAAACTCATACACCACGCAAACCAGTCATCCTTCCAGTCTGTACACGGAGCAGAGGGGATGGAACCAAGGTGGACCACCGAATCCACCACCACCTCCATCCAATCAAGCTAATCCTTCCAGTCAGTCACCGCAACGTGCTCTTTCTCAATCTCCTGCACCACCACCTTCAGCATCCCCGCAACCACAATCTGCCCAATCACAGAGTTTCCATAATCTGCAGCAAAGATCCACAACACCGAATACTCAAGGAATCGATTCAGGGGAATTGTCCGGGCAAAACAGTAACGATAGTTCGAATGGACCAGCTTGTCCAGGAACACCCAACTCGCAGGGGATGAGACCAACCCCTTCACCTACAGGATCCACAGGTTCTCGCTCGATGTCCCCTGCTGTCGGCCAACAAAACGTTGTTCAGATGCCTCCACGCCCGTCGAGTAGCCAGTCAGATGGTAGTGGACCAGCACGAATGAGTCATTCTCCTATGACAACTCAAGTAGCATACCAGCAGCCATTGGGTCCTTCGCCACACATGCACACCTATAAAATGAATAACACCGGTCCTGGTGTGGTTCAGCCAGGACCCGGTGCTACGAATCTTGGCGGGATAAACCCTATGGGTGGTGGAATGGGATATGCAGCTGGTGGAACGGCTGCCGGTCAGCCTGGGGGTTATCACACGCAAAGTACCTATCCTCCTCCACGTCCGCATGTACAATTTCCACAGGGGTATCCATCACCAGCGAATTCACAACCACCACCTAATAATCAATACCAGGCTCCCAACAGACCCAACAATTTGGTGCAATATCCTCCGTATACGCATAAAATGGGATTTAATAGTGTACCGCCAGGTATGCCACCCAGTCCTGGACCGCCTCAGGTTTATGGGAGTAGCAATACAACAGGTATGGTACCTCCTGGTACCCCTGGTGTGACTGTGATCGGCAACATGGGACCTCCAGCTAGCTCCATGGGCCCTCCTCCACCATCGCCCAATCACGTCAGTAGTCAGCCACCTCCGACAAGCTCGGCTGTACCGCATTTACACACTCCAGCAGCTACACCACCCTTAAATCACGAGGGAAGTCCAATGCCTCCACCGAGTACCACTCCTAATTCGCATCCTACTTCGACGCCAACTTCGACGAGTCATTCGGACCTTACTACGGAAACCTCGAACGACAACGGCATAACAACCACGGCTTCAGTAACATCATCGATTAACGTCACATCCACTTCGAGCGGTACTGTTACATCTGTAATAACCACCGGTCCTGATGGCACGTCCTTGGACGAGGGTTCTCAACAATCTACATTGTCAAACGCATCGGCTGCTTCTGGAGAAGATCCAGCATTTACACCAAAGGTACGGAAAGAAATGATGGGAGGGTATCACAGCCATCCAACCACACCACAAAGTACAGTTCCGTCGCCCGGTGCCGCGAGTATCAATTCGATCCACGAAGAATATCCTGACATGAACAGCCCTGGTTGGCCGCGTACACCTGCTAGTCCTGTTTTTAACAGTCATGTGCCTCAAGACCCGTACAGATCTAAGAAACCAGATAGCTTGGCGaaattgtacgaaatggacgactcgatggaacggagaacatggctggacaaattagttaactttatggaagaacgaagaacaccaattacaagctgtcctaccatctccaagaaccccctcgacctatttcggctatacctctacgtcaaagagagggggggcttcatggaggtatgcaaggtgacaaagaacaaaacgtggaaagacatagcggggttgctcggcatcggtgcgagtagtagcgcggcgtacacgctgcggaaacactacacgaaacacttgttggcgtacgaatgccacttcgaccgtggaggtgtggatccccagcccatcataaaccaagtcgaagctggctcgaagaagaaaggatcaaagggaactgcttctgtaccctcgccggGGTCTTCCAATTCACAAGATTCCTTCCCTGCTGCTGGATCGAGTAATGCTTCCATGGATGGTTATGGAAGTTACCAGAGTGGTTACACCGGTGGTACACCTGGAGGACCTTCTTCGGAGTACACGCCTCCTCCTCCTAGACCACCCAGCCAGAGTAGTGCTCCCTCCCCTCATCAAGGTGGTTCGAACCAGGGCGGGCAGAATAGCGCGAAACCGTTCGACAACAGTGTGGGACGCTCTGCTCGCAAGTCGAACGCGGCGCCCTACCCTGGTCCACTACGAACCCCAGGTATACAACAAAGCAGTTACCAGAACACAGGTTCCTACCAAAACTATCCCCAGGATCAGTATATCCGCCCTCAAGGAAACACCCTATCTCAACAGGGAGAGTTCAATCAACCTTACTCACCGAGGTCACATTATTCACCTTATGTACCGGACGTCGACAGGGGTTATCCTGGAGGAAATATGCCGCCGAACAACGCCAGTGGACAGGATATATACAATAGATATAGTAGTAGTCAACAAGCTGGAAGCTACCCGGCAGGAACACCGCCCAACGCCAGAAGTAACAGCTACCCGTCTGCGCCGCAGACACATCCAGCTACTGTACCACAACAAACGGCTACCAGTCAACCTTCTTCACCTTCCCAGCCTTCCGCTACTTCGTCTTATTCGTGCCCACAAGATTATTATCGACAGGAACAGGGAGGATATGGAGCTCCAGGAGGGACACAAATATATTCAGGAGGCGCGAGTGCAAACAAGAACATGCCTCCGCCACCGCCAGGTCCAAACCCGCCTAGGCGCCATCCTGATTTTGCCAAAGACCAACAGTATCCTCAATATAATCAACCAAGACCAACGTACCCAGGATGGCCAAATACAACCAACCAGTACAACAGCAGTAGTGGGAGTAGTAGGGTATCATATACATCGCAGCAACCGCAACCGCAATCACAACCGCCGCAGCAACCATCGCAGCAACCGACGCCACCGGTCGGTCCTGTGTCTGCTACGCCTGCAGCAGGAGCAATCGCTAGTAATCAGCAATGGGGTACTCAGCAACCAAATAGAACTACTCCTCAACCGACTCTGAACACTATAGCGCACGCTCCTCCTCCGTGGGATCATCGATACTCGAATCAACCGTCCCCCCTTTATCCTGCACCTGGTAATCACCAGACTCAGCTCGGAATCAACCCCATGATAAGTCAACAACCTACATCGAAAAGAGAAATGACATTCCCTCCTGACAGCGTGGAAGCGGTGACACCACTTATTTATAAGCGGCGGAAACTGACACGAGCCGATGTTGCGCCTGTCGAAGCTTGGCGCATAATGATGGCTTTACGATCTGGCCTATTAGCTGAAAGTTGTTGGGCCCTTGACGTACTAAACATATTATTATTTGACGACTCTTCTGTAAGTTATTTTGGATTGACTCATTTGCCGGGGTTGCTGGACGTGCTGCTGGAACATTTCTCGCGTTCCCTTTCGGACATGTTCGAGTCGACCGTGAACGAGGAGGATCGCAACTGGACCCAATCGGCGGAAGGACCGGAAGTGGATTTGGGCGCCGTGACGCGGCCGATCGATCCCGAGGACCGAACCAAACTTTTATCGTCCTCAAACTACACGTTCTTGTCGAGAAGAGGTCGTCCGGTGAAAATCATTTCAAGGGACGAGGACCTATTCGTTCTGGACACACGGAGGACTTGGGATCATCAGGAGTGTGAATCCGAAACCGAGCCTTGGCAAGTCGACATCTGCACCACGAAATACATAGTGACCTGCTTTCAGTCTGAGATCGGATCGGTACCGTTCGCGCGTCTTCTCAGAGACGAAAAACCACCGTTGCTGCAGAAGGAGGTCGAATGTACAGATTCGAAGGACGAAACCAAAGTGGATTCGAACACGCTCGAGACGTCGGAGTTCTCGTCGCAGAAGGCCGCCGAACTCGACGATAAGCCGAAGGAGGCCAGCGAGAAGAAACAGCTGGACAAGAAGAAGAAAACGAAGACGTTGAGCGACGTTTTGTCCAGGATCAAGAAAGAACCGGTGGAGATGAACGATTTGACGAGGGAGCTGTTCGAGAAGAAAAACGACGGTTTCAAGAAAGAGTGCGAGACCGAGAGCGCGAAGGTGAACAACAATATGGGCGAGCACTTCTCGAATATACAAAAGTCCGACGAGGAGTTGATCCCCACGCAGAACGGGCTGAACGACACGGCGACGGCCAGCGTGGAGCTGGAGAAGCCCGAGATAAAGGTGGAGAACGAGGATCAACAAGAGTCGATATCGAAAGAGGACGATAATAAGGAGGGACCAAGATTAAAAATAAGAGATCCAgcgggtacgctgaagaggagacgaataagcgactacgaggacgagagttactcaagggacgaggcgagcttgtacctcgtcaccgagacacaggacaatctggctcggcgttgcgtctgcttgtccacaatattaaggaatctcacattcataccgggcaacgaggccgaattcgccaagaatgtgacgttcttgagcttgctcggtaagctgttgctgttgcatcacgaacatccggccaggacacagaagacgcggaactacgaccgggaagaggacgcggatttcgcggacagttgcagtagcctgcaaggcgagagcgaatggtggtgggatttcctgcatcacataagagaaaacgtgctggtgatggcggcgaacatagccggccacttggatctgagtcagcacccggaggagatatcccggccggtgttggacggtcttctgcaTTGGGCGGTGTGTCCAGCCGCTCACGGCCAGGACCCGTTCCCGACGGTGGGCCCGAACTCGTCGTTGTCGCCGCAGAGATTAGCGTTGGAGGCTCTCTGTAAGCTTTGTGTTACCGAGTGCAACGTGGACCTAGTCGTTGCGACGCCCCCGTACTCCAGGCTTCAGAGACTCTGCTCCGTGTTGACCAGGCTACTGTGCCGGAGCGAAGAGCAAGTGCTGCGCGAGTTCGGCGTGAATCTGCTTCATTTCCTGTCGGCGGCTGACAGCGGGGTGGCGCGCACCATAGCTCTGCAAACACCGTGCGTTGCGTTGCTGGTTGCGTTTATAGAGCAGGCGGAATCGAGCGCGTTGGGCGTCGTGAATCAACACGGATTGGCCGCGTTACGGGACAATCCCGAGTCGATGGGAACCAGTCTTGACATGCTGAGACGCGCGGCCGGCACGCTGCTCAACCTTGCCAGGCATCCGGACAACAGGACTCTGCTGTTACAGCACGAGTCACGGCTACTTGCCCTGGTGATGAGTCAGATATTGGATCAGCAGGTGGCCGCGATTGTTGCTCGTGTATTGTTCCAGTGTTCCAGGGGCGCGTAA
Protein Sequence
MAATQAESQQNDVKLNESVKCAQKRPQVGGNSASVNAKQQLDPEPGDKVPRGAAQLLKYVNRGGDTGFEMSQYREDIGGHTAGEVKSPREAGQAPQESIGKQEPLDAPGHPNHPGHPFTSNVIRDYSDEYTNKSNEFPSKSLTDYPAKQIPEYVGKHGDFPGKQLEYHGKHLIHESERVHRADMEEHYAASKIESRLAYVGATPTSFPGQPRFLSGQSISQATGPTPTLNQLLQASTPVHRFHGNYPGMGPETYQQPWPIQRPPVVPPVYPQPGQRPPQTGSPRLHAGPGGPSSPTPMPYQQYTQRYSSPSRPHAPYTHHQINSYTTQTSHPSSLYTEQRGWNQGGPPNPPPPPSNQANPSSQSPQRALSQSPAPPPSASPQPQSAQSQSFHNLQQRSTTPNTQGIDSGELSGQNSNDSSNGPACPGTPNSQGMRPTPSPTGSTGSRSMSPAVGQQNVVQMPPRPSSSQSDGSGPARMSHSPMTTQVAYQQPLGPSPHMHTYKMNNTGPGVVQPGPGATNLGGINPMGGGMGYAAGGTAAGQPGGYHTQSTYPPPRPHVQFPQGYPSPANSQPPPNNQYQAPNRPNNLVQYPPYTHKMGFNSVPPGMPPSPGPPQVYGSSNTTGMVPPGTPGVTVIGNMGPPASSMGPPPPSPNHVSSQPPPTSSAVPHLHTPAATPPLNHEGSPMPPPSTTPNSHPTSTPTSTSHSDLTTETSNDNGITTTASVTSSINVTSTSSGTVTSVITTGPDGTSLDEGSQQSTLSNASAASGEDPAFTPKVRKEMMGGYHSHPTTPQSTVPSPGAASINSIHEEYPDMNSPGWPRTPASPVFNSHVPQDPYRSKKPDSLAKLYEMDDSMERRTWLDKLVNFMEERRTPITSCPTISKNPLDLFRLYLYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQPIINQVEAGSKKKGSKGTASVPSPGSSNSQDSFPAAGSSNASMDGYGSYQSGYTGGTPGGPSSEYTPPPPRPPSQSSAPSPHQGGSNQGGQNSAKPFDNSVGRSARKSNAAPYPGPLRTPGIQQSSYQNTGSYQNYPQDQYIRPQGNTLSQQGEFNQPYSPRSHYSPYVPDVDRGYPGGNMPPNNASGQDIYNRYSSSQQAGSYPAGTPPNARSNSYPSAPQTHPATVPQQTATSQPSSPSQPSATSSYSCPQDYYRQEQGGYGAPGGTQIYSGGASANKNMPPPPPGPNPPRRHPDFAKDQQYPQYNQPRPTYPGWPNTTNQYNSSSGSSRVSYTSQQPQPQSQPPQQPSQQPTPPVGPVSATPAAGAIASNQQWGTQQPNRTTPQPTLNTIAHAPPPWDHRYSNQPSPLYPAPGNHQTQLGINPMISQQPTSKREMTFPPDSVEAVTPLIYKRRKLTRADVAPVEAWRIMMALRSGLLAESCWALDVLNILLFDDSSVSYFGLTHLPGLLDVLLEHFSRSLSDMFESTVNEEDRNWTQSAEGPEVDLGAVTRPIDPEDRTKLLSSSNYTFLSRRGRPVKIISRDEDLFVLDTRRTWDHQECESETEPWQVDICTTKYIVTCFQSEIGSVPFARLLRDEKPPLLQKEVECTDSKDETKVDSNTLETSEFSSQKAAELDDKPKEASEKKQLDKKKKTKTLSDVLSRIKKEPVEMNDLTRELFEKKNDGFKKECETESAKVNNNMGEHFSNIQKSDEELIPTQNGLNDTATASVELEKPEIKVENEDQQESISKEDDNKEGPRLKIRDPAGTLKRRRISDYEDESYSRDEASLYLVTETQDNLARRCVCLSTILRNLTFIPGNEAEFAKNVTFLSLLGKLLLLHHEHPARTQKTRNYDREEDADFADSCSSLQGESEWWWDFLHHIRENVLVMAANIAGHLDLSQHPEEISRPVLDGLLHWAVCPAAHGQDPFPTVGPNSSLSPQRLALEALCKLCVTECNVDLVVATPPYSRLQRLCSVLTRLLCRSEEQVLREFGVNLLHFLSAADSGVARTIALQTPCVALLVAFIEQAESSALGVVNQHGLAALRDNPESMGTSLDMLRRAAGTLLNLARHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVLFQCSRGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00219586;
90% Identity
iTF_00760779;
80% Identity
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