Lvie006136.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lasioglossum vierecki
Gene Symbol
Gata6
Assembly
GCA_028455595.1
Location
CM052343.1:1346779-1353321[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8 3.7e+03 -2.2 10.3 2 26 579 601 578 604 0.80
2 2 9.5e-16 2e-12 46.7 10.7 1 35 634 667 634 668 0.97

Sequence Information

Coding Sequence
ATGAAGGAAAGCCTGGTGAAGCGCGAGATCAAACACGAGTGGGAGGAGAGTTGTGTCGACGAGAGTTCGTCTCGGATGACCGGAAGTGGAAACTCAACCGGAACCTCGATCGAAGAACAACGCCAAACGATGGAGAGTCCTCGAACGGTGATCACAGCGAGAAGGCACGTGCGCACGATCACAACGGCTGGACACATTACAGAGAACGTGCAGGAAAATGAGTCAGAAGCAGGACCGAATTCTCCGGACGCGAACGCGATGTCTGGCATTCTTCAACTCCAGGCGCATCATCGTCATCAGCTTCAACCGCTCGAGCAACAGCATCGACAAGCTCAGTCCCGCAATTATCAGGACGGAGAGCAACAGGATCCGGGGAACCAGCAACCTGCTGAACACTTTGTACAAATATCGCGAGGGGGCACGGAAGTGCAACAGCAGCAACAACATCATCGGGTCGGCGAACAACCACGTGTCGTTTATCTAACCAGCAACGGACAGGAATTGAAGGTGGAGGTTTCAGAGACCATCGAGCACGGCGCGCTAACCGTCAAGGAATCGACGAGGTACGAGGCCTCCGACGGACCGGATCGGAACGAGATGGAGAACATGTACGTGTACGCGACGGACGGTCAGCAGTTGCGGAGGGAGAATCACGGAATCGCGATTCAGATGCAAGAGAGACGTGGTCACGCAGCCACGACTCAACAGAGCTACAGTCCACGAGAGTCTGGTCAATCAAGTGGAGGAAACGGATCGACCGGAAATAGGACGTACCATCACGGATCGCCGGTATTGGTTGCGAGTACAGAGGAATACGAAGGAGGAACGAATGCGACGACAACCGGAACCGGAACGAGCACGGAAAACGCCACCGGAGCATCTGCAGGACCAGGCTCCGCCTCTGGTTCCGGTTCTGGTTCTGGATCCGGTACTCCCACCGTTCAGATAGGCTCGCCTGCTGCTCCTGCGTACTCTCCACCGATCGTTGACGGCATCCCTGTTTcggcgtcgagcgggtcgcagcaagcggcgcaacaacaacaacaacagcaacagcatcatcaCGTGGTGACCGGATACGTCGACTCGGTCGTGGATAGATTCGCGGTCCCCGTGGCGAACGACAAACAGGTGTCCACCACGTACCACACTTTGGAGACGGTGGCGATATCCCCATCGCAACCTGTACAATACCCAGCGCAATATATTCACGGCAACGAAACGTTTCAACCAGCTCCGAGCTACAGCTATGGCAAATCAGGAGAACAGCTGATCCTGACGTATCCGACGGCTAGTCAGCTGGGTCCTCGAGTCGGTGGTGTGGAGTCTCCGGGCAGCAGTTACATGAAAGGAGATCCAACGCTGGCGTCGTCGGTGGCAGCGTCGCGCGGTGTGTCGCTTCACTACGAACAGCCGAATTCTCCGAGTGCTCAGATGACGTTATACGGAGGCGGAAGCGCCGCGTTCTCGTACGCGAGGCCACCAGCCGGGCCAGAATATTGGAGCACGGCGGGTACACCCTCTCCGCCAAACTACGACGGTAGCCAGGCTTATCCAGCAGGAGTGGCTACCATCCCGATCGGTGACGCGACCAATATGCAGCTGTGCTCCGGTGGAGGGTACAGCTTGTCGCCTGGCACCGCCGGAACACCTTCCTCGTGGTCCAGTGTGCCGCTATCCACGTCCGAGGAGAGCTTCGACGGATCAATGATCATCGGCGATACAAAGGAGTGTCCCAGTTGTACGAACCTGACCAACGTCTGGAGGCGAGACGAGACTGGACACTATTGCTGTGCCAACTGTTTCTGCAAACCAAACGGAGTGAATAGAGCTGCCATGAGATGCGGCAAGCCGAAACAGACGGTCGCCCCGACGAACGTGCGCAAAACGGGTATGCAGTGCGCGAACTGCAGGACCTGCAACACGACCCTCTGGAGACGAAACAACAACGGGGAGCCGGTGTGCAACGCCTGCGGACTTTACTATAAACTGCACAACGTAAACAGGCCGCTCAGCATGAAGAAGGAAGGTATTCAAACGAGAAAGAGGAAACCGAAAAATCACACTGCGATCAGCGGGAATTTGGCCGGACCCAGCAGCGGCATGCACAAGACCGAGATTAAGTCTAACTTACTCGTGGACTCGCTGCAGCTGAACGTGTACGGGATAGGTGGCAGTGGAAGCGAACGGTCGGAGGAGAACCATCCACCTGTAGGTACACCGACAACGATGCATTTGGGACACGCGCACTCGCCCCTCGCATTACCCACCGCCGCCGTTCTGAACCGTCAAACCACCCTTACCGTGCCACCGCTAGAGCCAATCGCTAGTCAGCCCAGCGTCGACCCGATCTCTGTAATAACTTCTACGACGGCTGTCCACGCCGAGAGAACAATCTAG
Protein Sequence
MKESLVKREIKHEWEESCVDESSSRMTGSGNSTGTSIEEQRQTMESPRTVITARRHVRTITTAGHITENVQENESEAGPNSPDANAMSGILQLQAHHRHQLQPLEQQHRQAQSRNYQDGEQQDPGNQQPAEHFVQISRGGTEVQQQQQHHRVGEQPRVVYLTSNGQELKVEVSETIEHGALTVKESTRYEASDGPDRNEMENMYVYATDGQQLRRENHGIAIQMQERRGHAATTQQSYSPRESGQSSGGNGSTGNRTYHHGSPVLVASTEEYEGGTNATTTGTGTSTENATGASAGPGSASGSGSGSGSGTPTVQIGSPAAPAYSPPIVDGIPVSASSGSQQAAQQQQQQQQHHHVVTGYVDSVVDRFAVPVANDKQVSTTYHTLETVAISPSQPVQYPAQYIHGNETFQPAPSYSYGKSGEQLILTYPTASQLGPRVGGVESPGSSYMKGDPTLASSVAASRGVSLHYEQPNSPSAQMTLYGGGSAAFSYARPPAGPEYWSTAGTPSPPNYDGSQAYPAGVATIPIGDATNMQLCSGGGYSLSPGTAGTPSSWSSVPLSTSEESFDGSMIIGDTKECPSCTNLTNVWRRDETGHYCCANCFCKPNGVNRAAMRCGKPKQTVAPTNVRKTGMQCANCRTCNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKEGIQTRKRKPKNHTAISGNLAGPSSGMHKTEIKSNLLVDSLQLNVYGIGGSGSERSEENHPPVGTPTTMHLGHAHSPLALPTAAVLNRQTTLTVPPLEPIASQPSVDPISVITSTTAVHAERTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00860801;
90% Identity
iTF_00863639;
80% Identity
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