Lvie017360.1
Basic Information
- Insect
- Lasioglossum vierecki
- Gene Symbol
- SNAPC4
- Assembly
- GCA_028455595.1
- Location
- CM052337.1:20041425-20044124[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.23 2.3e+02 2.2 0.0 3 18 165 180 164 181 0.92 2 5 2.5e-10 2.5e-07 30.9 0.6 1 45 261 307 261 308 0.95 3 5 4.9e-08 4.8e-05 23.6 1.2 4 43 318 361 317 364 0.96 4 5 5.5e-12 5.4e-09 36.2 0.0 1 45 370 415 370 416 0.96 5 5 6.1e-10 6e-07 29.7 0.2 3 40 425 462 424 464 0.87
Sequence Information
- Coding Sequence
- ATGGATGAGCCGACAGACGACGATGATTTCGAGGAAATCCTATCGATGGAAATCCAGTCTTCCAGATGGAAAAGTGGGCACGATTTCCCGTGTATCTCTCCGGTGGAAAAATCAGTGACGTCCGACAAGTCGCAAGTGTTTCCGAAAGAGTCTACGTTTCAAAAGGAATCGGAACATCAAAGGGAAAATATAGTTTCGGAATGTAGCATCGAGGATTGCGAAAAGTTATTGAAATACAACGAGCAGATCATATCTGTTCTGCTCGATTTAAAGAAACACATAACCTACGCGATCGAGAAATGCGAAACGAAATTGTCCCTTATAGAGTCGGGCCTTGAGAAACATGTAGCTGGAGACACTAGAGCTTTGATTTGCAACGCTGCTATGCCGTATTTCAAGGACAGGAATTATTTCTTTGCTCCCAAGAACGAAGACGAACTTTTGAAAGAAAATTCTAAGGAATTGCAACTCAGGGATCTTCCCAAAGTAGCTCCTTGGACGATGAAAGAAAGGAACATGTTAGTTAAAGCAATACGGGAGCAAACCATCGCAGCATCTTACAGGTGTGATTCTCTCGACCTCGATCAGTCTACGTGCAAACCCAACAAAAGTAAGAGAGGCAAAAAGAGAAAAGCAACCAACGACCATGACAAACAGGTTGTCCAGCTGCAAGTCATAGATTTAGACTGGTTCAATATATCGTCTGTTCATTTCGAGGATGTACACTCGCCACTGGATTGTCGGGTCATGTGGAATGTTTTCCTTCATCCGTCGATCAACAAAAACTCCTGGACCAAGTTGGAAGACACAAAGTTAAAAGAAATTACAAAGAGATACAAAGTTCAGGACTGGGATAAAATTGCGGAAGAGTTGAAGACAGATCGTTCCGCTTACCAGTGTTTCATCAGATACTATACGATAAGGAAACTGCCAAAAGAAAGAAATTTTACATGGAAACGCGAGGAGGACGAGAAACTTTTAAAATTAATCAAAATCTTTCAGATCGGCGACTTTATTCCGTGGGGCGAGGTAGCCAATTGGATGGAAAAGAGAACCAAACAACAGATATATTTTCGATGGACTTACAGTTTGGCGCCTTATTTAACTAAAGGCAGATTTAGCAAATCCGAGGATAATATGTTGCAATACGCAGTGGCTAAGTATGGCACAAATTTTCGTAAAATATCAGCCGCACTGATGCCGAACAGGACGACAGTCCAGCTACACGACCGTTATCATACGCTGATTAACAGTCAACTCGAAAATTGGAACGTCTGGTCACTGGAAGAAGATTCGAAGCTGTTGGAGCTTTACGAACGTTTCGGTCCAAATTGGTCTAGAATAGCTAAAGCGTTTACGTGCAAAACGAGAACGAAGTTGAGACACAGGCACGCCGCTTTGCAAAAGTATATTAGGAGGGGTGTATCCATTAACGAGTTGCACACAGTCTACTTAAAGGATAAGAACAGCGCAGTAGAACAGGGGACAAGAGCCAAAGAGTCCAATCGAAAGCATTACTTTGATAAGGACAAGGTGAACCAGAACCATAAGGACTGCAACGAGGACATTGATAAGGAATTGATCAAGTATTTCCATGAAGAAGCAAGGATAGAAAAATCGTTTAGTCACAACCAACAGCCTTATATGTCTGATGAACTCGACTGCGATGTGAACAAATTATATAAAATTCTACAGCAATTAAATGCTCAACTTTCTATTCCCGAAGATGGCTATAACAATTCGATGTTAAACGGCAGGCAGAGACAGCTTCTATTCTCGTTGAAGGAATATACAGATACAAAGAACAACAAGGACAGAAAACGTACAGTATTAGACGAGTATAACTCGCTTATGTTTGGTGCGAATCACAGCAATGTTGCGGAAATTCCAAGTACAACGAAAGGCATAGACTGTCCTGTAAATACGCGGACTACCCTTCTAGATGAGAACGCGATCTTCTTCGACACTCCAGACTTTGTTGTATCTCATATCGGTGGCAACGAGCAGCAATTTGTATTTGAGAAGCTCACTCGTTTACTTGTGCAGAGTAGTAAATCAGAAGATAGACAATTAGTGCGAACTGCTAAAGGTATTTTGGATCGGAATTACTCTGCTACCAACAGCAGGGGCGGCAACGGCAATAGAAGCAGCTTGAACTGTAACATTGTGTCGACCATTAATTCAAAGAATTCAAGAAACGACGGCAATGTGCAAACCATTGTTCGTAGTCGTATAAATCGTTCAACGTCGTGTTTGCAAAGCGAAAATACGACGAGAAATTTAAATACATTGTTTAACGCGTTCGAAACGATACGCGAGTTTCCAGCTGTCACCACCATGGAAATACCGAAAGCTCCGGTATCTGCGATCGAAACGACACACTCGACTTTATTCAGTTTTAAGCGTTTACTCGTTTTAAAGGAGAACTTCAGCCAAGAACAGAATATTCCACCGAAGTGTCCCACGATGTCGAAGACTTGTGAACGATCGTTGAGCTTATTGGAAACGCGTTTAGAGCAATTATTTAAATACCCGATCGGTCTGTCGAGGACCACATTACCCGAAGTTTATGTTATGGACACTTTCTCGTACAACGACGTTAAATCGCAAAAGAAAGCTACCAATCCACCGACAATACCAAAATCATGTAAAACGAGAAAGCTTCAAAAATTCAACAAGACTAGCAAAAGCGATAACTAA
- Protein Sequence
- MDEPTDDDDFEEILSMEIQSSRWKSGHDFPCISPVEKSVTSDKSQVFPKESTFQKESEHQRENIVSECSIEDCEKLLKYNEQIISVLLDLKKHITYAIEKCETKLSLIESGLEKHVAGDTRALICNAAMPYFKDRNYFFAPKNEDELLKENSKELQLRDLPKVAPWTMKERNMLVKAIREQTIAASYRCDSLDLDQSTCKPNKSKRGKKRKATNDHDKQVVQLQVIDLDWFNISSVHFEDVHSPLDCRVMWNVFLHPSINKNSWTKLEDTKLKEITKRYKVQDWDKIAEELKTDRSAYQCFIRYYTIRKLPKERNFTWKREEDEKLLKLIKIFQIGDFIPWGEVANWMEKRTKQQIYFRWTYSLAPYLTKGRFSKSEDNMLQYAVAKYGTNFRKISAALMPNRTTVQLHDRYHTLINSQLENWNVWSLEEDSKLLELYERFGPNWSRIAKAFTCKTRTKLRHRHAALQKYIRRGVSINELHTVYLKDKNSAVEQGTRAKESNRKHYFDKDKVNQNHKDCNEDIDKELIKYFHEEARIEKSFSHNQQPYMSDELDCDVNKLYKILQQLNAQLSIPEDGYNNSMLNGRQRQLLFSLKEYTDTKNNKDRKRTVLDEYNSLMFGANHSNVAEIPSTTKGIDCPVNTRTTLLDENAIFFDTPDFVVSHIGGNEQQFVFEKLTRLLVQSSKSEDRQLVRTAKGILDRNYSATNSRGGNGNRSSLNCNIVSTINSKNSRNDGNVQTIVRSRINRSTSCLQSENTTRNLNTLFNAFETIREFPAVTTMEIPKAPVSAIETTHSTLFSFKRLLVLKENFSQEQNIPPKCPTMSKTCERSLSLLETRLEQLFKYPIGLSRTTLPEVYVMDTFSYNDVKSQKKATNPPTIPKSCKTRKLQKFNKTSKSDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00866629;
- 90% Identity
- iTF_00866629;
- 80% Identity
- -