Lvie004645.1
Basic Information
- Insect
- Lasioglossum vierecki
- Gene Symbol
- retn
- Assembly
- GCA_028455595.1
- Location
- CM052335.1:17228436-17242636[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-19 5e-16 59.1 0.0 17 89 126 196 114 196 0.91
Sequence Information
- Coding Sequence
- ATGCCTGGGTTGCCGGGTTGCGCGTATATCAACAATAATTGCAGGGCCAATAATAAAGCCGGAGGGGCCACGCTCGATAGCCCGAAATTGCTGGTTCCCCTACCTCAGCCTGCAACGTTTTATTGCCTCCACTCTCGAGAGAGGCAGGAATGGCGGCAGTCCCCTTCGTCCTTCTCGATGGCGGATAAACGATCCTGCGATACGATGCCACCGGTAGTGATGGCCAGTCGCCTAGCCTCGACGTTTCGTGCAATCCTCTTGCTACATTGTCCCGGAGCACGCTCTTCCTCCATAAAAGTGTTATCGTCCGGCTTAGAATCCTTCGACTGGCTTAGCCAAGGCTTTTTTCGCTTCTTTTTGCATCGAACATCGTTCAGAACACCGATCAATCGGCTGCCGATCATGGCGAAAGCGGTGCTGGATCTATACGAGCTATTCAATTTGGTGATCGCTCGAGGCGGGCTGGTCGAGGTAATTAACAAGAAGCTCTGGCAGGAAATCATCAAAGGTCTTCACCTGCCATCGAGCATCACTTCCGCCGCATTCACTCTGCGCACCCAGTACAGGAAATACTTATATCCATACGAGTGTGAGAAAAGACAACTGTCGACACAAACTGAATTGGAAGCAGCCATCTTAGCAAATAAACGAGAAGGTCATCATCGCGGCAGTTACAGCGCTTACAGGGGCAGCGGAAGCAGTGGTGACAGCATGATGCCAAGGAATCCACATACATCGAATGCTCTCGCATTGCACTCACAAATTTCGCCACTATCTTTAGTTACAGCAGTAGCTGCCAGTGGACAGCATCATGGACAAACTTTGGTAAACGGAAGCGCAGCACACACGCCTCTAACACACCATCCTCAGCACCCTCAAGGATCACTGGGACAGTCGCCGAATGCTGGACCTATTCCGGGAATGGCACCGGCCGAGTTTGAAGTTCGCATGGTAGAGTATCTGAAGCAGCTGAACAAGGGGCTAATAAATGCAAGCGCTGGTACACCACCCCCCATGATCCACCGACAAGGTAGCGCGTCACCACAACCATCCACACCGCCGCGAGACGGAGCTTTCAGCGCTCTGGAAATGTCCCGACTCACACTATGGAACATGTACAACAATAACACCTTCTATCCTGGAGTTGGTCATCAACCACCCATGTCGGCACAGCCTTCACACTCGCCGTTACCTCCGGCGTCTAGCCCTGAACCTCAGAGGGAAGCCCTCGACCTTGGACTTAGGTCATCGCCCGGGTCCTCGTCTCCGGCAAGACAAAGTTCACCTTCTTCAGGCGGCAGTTTAGTGAAAAGGGACCCCGAAATACTTAACACACCTGGACCACCACCTGCGAAAAGATTGCTCTCGGACGAGGACAGTCCTGTTGAAAGAAGCAGCCATCCTATGCTAGGAACGCACATTAAAATTTGCAATCGAGGAGATGGAAGAAACGGCGACAATTCTCTAGTGGTCAGTATGGAGCTGAACGGAGTGATGTACCAAGGAGTATTGTTTGCCCAAACGGACAGCAACAGAAGCACGAGCAACACTCCGAGCAACAATACGGCGAAACCGTCGCGGAGCATGGTCTCGTGA
- Protein Sequence
- MPGLPGCAYINNNCRANNKAGGATLDSPKLLVPLPQPATFYCLHSRERQEWRQSPSSFSMADKRSCDTMPPVVMASRLASTFRAILLLHCPGARSSSIKVLSSGLESFDWLSQGFFRFFLHRTSFRTPINRLPIMAKAVLDLYELFNLVIARGGLVEVINKKLWQEIIKGLHLPSSITSAAFTLRTQYRKYLYPYECEKRQLSTQTELEAAILANKREGHHRGSYSAYRGSGSSGDSMMPRNPHTSNALALHSQISPLSLVTAVAASGQHHGQTLVNGSAAHTPLTHHPQHPQGSLGQSPNAGPIPGMAPAEFEVRMVEYLKQLNKGLINASAGTPPPMIHRQGSASPQPSTPPRDGAFSALEMSRLTLWNMYNNNTFYPGVGHQPPMSAQPSHSPLPPASSPEPQREALDLGLRSSPGSSSPARQSSPSSGGSLVKRDPEILNTPGPPPAKRLLSDEDSPVERSSHPMLGTHIKICNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDSNRSTSNTPSNNTAKPSRSMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -