Basic Information

Gene Symbol
osa
Assembly
GCA_028455745.1
Location
CM052305.1:25579475-25598316[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-25 5e-22 78.6 0.0 2 89 858 945 857 945 0.92

Sequence Information

Coding Sequence
ATGGCTGCGACGCAAGCCGAGAGCCAACAAAACGATGTGAAGCTGAACGAGTCCGTGAAATGCGCACAGAAACGTCCGCAAGTCGGTGGGAATAGTGCGAGTGTTAACGCGAAGCAGCAGCTGGATCCAGAGCCGGGTGATAAAGTGCCCCGGGGCGCGGCCCAGCTGCTTAAATATGTGAATCGCGGCGGGGACACGGGTTTCGAGATGAGTCAATACCGCGAGGACATTGGTGGACACACTGCCGGTGAGGTAAAATCACCCAGAGAGGCTGGCCAAGCGCCTCAAGAATCTATCGGCAAGCAGGAGCCTCTCGACGCGCCCGGTCATCCGAACCATCCCGGACATCCGTTCACGTCGAACGTAATACGCGACTACTCGGACGAGTATACTAACAAATCGAACGAGTTTCCCTCCAAGTCGTTGACCGATTATCCGGCCAAGCAGATACCGGAATACGTGGGAAAGCATGGAGATTTTCCAGGGAAACAATTGGAGTATCATGGTAAACACTTAATACATGAAAGCGAAAGAGTCCACCGAGCAGACATGGAAGAGCATTATGCAGCTTCCAAGATTGAATCCCGATTGGCATACGTAGGGGCTACACCGACCAGCTTCCCGGGTCAGCCGAGGTTTCTCTCTGGCCAAAGTATATCGCAGGCCACTGGCCCAACCCCGACGTTAAATCAGTTGCTTCAAGCATCTACGCCAGTGCATCGGTTTCATGGAAATTATCCTGGCATGGGACCGGAGACTTATCAACAACCCTGGCCTATTCAACGACCACCGGTTGTTCCTCCAGTTTATCCTCAACCTGGTCAACGACCACCGCAGACGGGGTCACCAAGATTACACGCTGGGCCTGGAGGACCAAGTTCTCCGACTCCTATGCCATATCAACAATACACGCAACGTTATTCTTCTCCTTCGAGACCTCATGCGCCGTATACTCACCATCAGATAAACTCATATACCACACAAACCAGTCATCCTTCCAGTCTGTACACAGAGCAGAGGGGATGGAACCAAGGTGGACCACCGAATCCACCACCACCTCCATCCAATCAAGCTAATCCTTCCAGTCAGTCGCCGCAACGTGCTCTTTCTCAATCTCCTGCACCGCCACCTTCAGCATCTCCGCAACCACAATCTGGCCAATCACAGAGTTTCCATAATCTGCAGCAAAGATCCACAACACCGAATACTCAAGGAATCGATTCAGGGGAATTGTCCGGTCAAAACAGTAACGATAGTTCGAATGGACCAGCTTGTCCAGGAACACCGAACTCGCAGGGGATGAGACCAACCCCTTCACCTACAGGATCCACAGGTTCTCGCTCGATGTCCCCTGCTGTCGGCCAACAAAACGTTGTTCAGATGCCTCCACGCCCGTCGAGTAGTCAGTCAGATGGTAGTGGACCAGCACGAATGAGTCATTCTCCTATGACAACTCAAGTAGCATACCAGCAGCCATTGGGTCCTTCGCCACACATGCACAGCTATAAAATGAATAACACCGGTCCTGGTGTGGTTCAGCCAGGACCCGGTGCTACGAATCTTGGCGGGATAAACCCGATGGGTGGTGGAATGGGATATGCAGCTGGTGGAACGGCTGCCGGTCAGCCTGGGGGCTATCACGCGCAAAGTACCTATCCTCCTCCACGTCCGCATGTACAATTTCCACAGGGGTATCCATCGCCAGCAAATTCACAACCACCACCTAATAATCAATACCAGGCTCCCAACAGACCCAACAATTTGGTGCAATATCCTCCGTATACGCATAAAATGGGATTTAATAGTGTACCGCCAGGTATGCCACCCAGTCCTGGACCGCCTCAGGTTTATGGGAGTAGCAATACAACCGGTATGGTACCTCCTGGTACACCTGGTGTGACTGTAATCGGCAATATGGGACCTCCAGCTAGCTCCATGGGCCCTCCTCCACCGTCGCCCAATCACGTCAGTAGTCAGCCACCTCCGACAAGCTCGGCTGTACCGCATTTACACACTCCAGCAGCTACACCACCCCTAAATCACGAAGGAAGTCCAATGCCTCCACCGAGTACCACTCCTAATTCGCATCCTACTTCAACGCCAACTTCGACGAGTCATTCGGACCTTACCACGGAAACCTCGAACGACAACGGCATAACAACCACGGCTTCAGTAACATCATCGATTAACGTCACATCCACCTCGAGCGGTACTGTTACATCTGTAATAACCACCGGTCCCGATGGCACGTCCTTGGACGAGGGTTCTCAACAATCTACATTGTCAAACGCATCGGCTGCTTCTGGAGAAGACCCAGCATTTACACCAAAGGTACGGAAAGAAATGATGGGAGGGTATCACAGCCATCCAGCCACACCACAAAGTACAGTTCCGTCGCCTGGTGCCGCGAGTATCAATTCGATCCACGAAGAATATCCTGACATGAACAGCCCTGGTTGGCCTCGTACACCTGCTAGTCCTGTTTTTAACAGTCATGTGCCTCAAGACCCGTACAGATCTAAGAAACCAGATAGCTTGGCGaaactatacgaaatggacgactcgatggaacgaagaacatggctggacaaattagttaactttatggaagaacgaagaacaccaattacaagctgtcctaccatctccaagaaccccctcgacctatttcggctatacctctacgtcaaagagagggggggcttcatggaggtatgcaaggtgacaaagaacaaaacgtggaaagacatagcggggtcgctcggcatcggtgcgagtagtagcgcagcgtacacgctgcgaaaacactacacgaaacacttgttggcgtacgaatgtcacttcgaccgtggaggtgtggatccccagcccatcataaaccaagtcgaagctggctcgaagaagaaaggatcaaagggaactgcttctgtaccctcgccggGGTCTTCCAATTCACAAGATTCCTTCCCTGCTGCTGGATCGAGTAATGCTTCCATGGATGGTTATGGAAGTTACCAGAGTGGTTACACCGGCGGTACACCTGGAGGACCTTCTTCGGAGTACACGCCTCCTCCTCCTAGACCGCCCAGCCAGAGTAGTGCTCCCTCCCCTCATCAAGGTGGTTCGAACCAGGGCGGGCAGAATAGCGCGAAACCGTTCGACAACAGTGTGGGACGCTCTGCTCGCAAGTCGAACGCGGCGCCCTACCCTGGTCCACTACGAACCCCAGGTATACAACAAAGCAGTTACCAGAACACAGGTTCCTACCAAAACTATCCCCAGGATCAGTATATCCGCCCTCAAGGAAACACCCTATCTCAACAGGGAGAGTTCAATCAACCTTACTCGCCGAGGTCACATTATTCACCTTACGTACCGGACGTCGACAGGGGTTATCCTGGAGGGAATATGCCGCCGAACAACGCCAGTGGACAGGATATATACAATAGATATAGTAGTAGTCAACAAGCTGGAAGCTACCCGGCTGGAACACCGCCCAACGCCAGAAGTAACAGCTACCCGTCTGCGCCGCAGACACATCCGGCTACTGTACCACAACAAACGGCTACCAGTCAACCTTCTTCACCTTCCCAGCCTTCCGCTACTTCGTCTTATTCGTGCCCACAAGATTATTATCGACAGGAACAGGGAGGATATGGGGCTCCAGGAGGGACACAAATATATTCAGGAGGCGCGAGTGCAAACAAGAACATGCCTCCGCCACCGCCAGGTCCAAACCCGCCTAGGCGCCATCCTGATTTTGCCAAAGACCAACAGTATCCTCAATATAATCAACCAAGACCAACGTATCCAGGATGGCCAAATACAACCAACCAGTACAACAGCAGTAGTGGGAGCAGTAGGGTATCGTACACATCGCAGCAACCGCAATCGCAATCACAACCGCCACAGCAACCATCGCAACAACCGATGCCACCGGTTGGTCCTGTGCCTGCTACTCCTACAGCAGGAGCAATCGCTAGTAATCAGCAATGGGGTAATCAGCAACCAAATAGAACTACTCCTCAACCGACTCTGAACGCTATAGCGCACGCTCCTCCCCCGTGGGATCATCGATACTCGAATCAACCGTCCCCCCTTTATCCTGCACCTGGTAATCACCAGACACAGCTCGGAATCAACCCCATGATAAGTCAACAACCTACATCGAAAAGAGAAATGACATTCCCTCCTGACAGCGTGGAAGCGACGACCCAACTTATTTATAAGCGGCGGAAACTGACACGAGCCGACGTTGCGCCTGTCGAAGCTTGGCGCATAATGATGGCTTTACGATCTGGCCTATTAGCTGAAAGTTGTTGGGCCCTTGACGTACTAAACATATTATTATTTGACGACTCTTCTGTAAGTTATTTTGGATTAACGCATTTGCCGGGGCTGCTGGACGTCCTGCTGGAACATTTCTCGCGTTCCCTGTCGGATATGTTCGAGTCGACCGTAAATGAGGAGGATCGCAACTGGCACCAATCGGCGGAAGGACCGGAAGTGGATTTGGGCGCCGTGACGCGGCCGATCGATCCGGAGGATCGAACCAAACTTTTGTCGTCCTCAAACTACACGTTCTTGTCGAGAAGAGGTCGTCCGGTGAAAATCATTTCAAGGGACGAGGACCTGTTCGTTCTGGACACACGGAGGACTTGGGATCATCAGGAGTGTGAATCCGAAACCGAGCCTTGGCAAGTCGACATCTGCACCACGAAATACATAGTGACCTGCTTTCAGTCTGAGATTGGATCGGTACCGTTCGCGCGTCTTCTCAGAGACGAAAAACCACCATTGCTGCAGAAGGAGGTCGAATGTACAGATTCGAAGGACGAAACCAAAGTGGATTCGAACACGCTCGAGACGTCGGAGTTCTCGTCGCAGAAGGCCGCTGAACTCGGCGATAAGCCAAAGGAGGCCAGCGAGAAGAAACAGCTGGACAAGAAGAAAAAAACGAAAACGTTGAGCGACGTTTTGTCCAGGATCAAGAAAGAACCGGTGGAGATGAACGATTTGACGAGGGAGCTGTTCGAGAAGAAAAACGACGGTTTCAAGAAAGAGTGCGAAACCGAGAGTGCGAAGGTGAACAACAATATGGGCGAGCACTTCTCGGACATACAAAAGTCCGACGAGGAGTTGATCCCCACGCAGAACGGGCTGAACGATACGGCGACGGCCAACGTCGAGTTGGAGAAGCCCGAGATAAAGGTGGAGAACGAGGATCAACAAGAGTCGATATCGAAAGAAGACGATAATAAGGAGGGACCAAGATTAAAAATAAGAGATCCGGCGGGTACGTTGAAGAGGAGACGAATAAGCGACTACgaggacgagagttactcgagggatgaggcgagcttgtacctcgtcaccgagacacaggacaacctggctcgacgttgcgtctgcttgtccacaatattaaggaatctcacattcataccgggcaacgaggccgaattcgccaagaatgtgacattcttgagcttgctcggtaagctgttgctgttgcatcacgaacatccggccaggacacagaaaacgcggaactacgaccgggaagaggacgcggatttcgcggacagttgcagtagcctgcaaggcgaaagcgaatggtggtgggatttcctgcatcacataagagaaaacgtgctggtgatggcggcgaacatagccggccacttggatctgagtcagcacccggaggagatatcccggccggtgttggacggtcttctgcaTTGGGCGGTGTGTCCAGCCGCTCACGGCCAGGACCCGTTCCCGACGGTAGGCCCGAACTCGTCGTTGTCGCCGCAGAGATTAGCGTTGGAGGCTCTCTGTAAGCTTTGTGTTACCGAGTGCAACGTGGACCTAGTCGTTGCGACGCCCCCATACTCCAGGCTTCAGAGACTGTGCTCCGTGTTGACCAGGCTACTGTGCCGGAGCGAAGAGCAAGTGCTGCGCGAGTTCGGCGTGAATCTGCTTCATTTCCTGTCGGCGGCTGACAGCGGGGTGGCGCGCACCATAGCTCTACAAACGCCGTGCGTTGCGTTGCTGGTTGCGTTTATCGAGCAGGCGGAATCGAGCGCGCTCGGGGTCGTGAATCAACACGGATTGGCCGCGTTGCGAGACAATCCCGAGTCGATGGGAACCAGCCTGGACATGCTGAGACGCGCGGCCGGCACGCTGCTCAACCTTGCCAGGCATCCGGACAACAGGACTCTGCTGTTACAGCACGAGTCACGGCTACTTGCCCTGGTGATGAGTCAGATATTGGATCAGCAGGTGGCCGCGATTGTTGCTCGTGTATTGTTCCAGTGTTCCAGGGGCGCGTAA
Protein Sequence
MAATQAESQQNDVKLNESVKCAQKRPQVGGNSASVNAKQQLDPEPGDKVPRGAAQLLKYVNRGGDTGFEMSQYREDIGGHTAGEVKSPREAGQAPQESIGKQEPLDAPGHPNHPGHPFTSNVIRDYSDEYTNKSNEFPSKSLTDYPAKQIPEYVGKHGDFPGKQLEYHGKHLIHESERVHRADMEEHYAASKIESRLAYVGATPTSFPGQPRFLSGQSISQATGPTPTLNQLLQASTPVHRFHGNYPGMGPETYQQPWPIQRPPVVPPVYPQPGQRPPQTGSPRLHAGPGGPSSPTPMPYQQYTQRYSSPSRPHAPYTHHQINSYTTQTSHPSSLYTEQRGWNQGGPPNPPPPPSNQANPSSQSPQRALSQSPAPPPSASPQPQSGQSQSFHNLQQRSTTPNTQGIDSGELSGQNSNDSSNGPACPGTPNSQGMRPTPSPTGSTGSRSMSPAVGQQNVVQMPPRPSSSQSDGSGPARMSHSPMTTQVAYQQPLGPSPHMHSYKMNNTGPGVVQPGPGATNLGGINPMGGGMGYAAGGTAAGQPGGYHAQSTYPPPRPHVQFPQGYPSPANSQPPPNNQYQAPNRPNNLVQYPPYTHKMGFNSVPPGMPPSPGPPQVYGSSNTTGMVPPGTPGVTVIGNMGPPASSMGPPPPSPNHVSSQPPPTSSAVPHLHTPAATPPLNHEGSPMPPPSTTPNSHPTSTPTSTSHSDLTTETSNDNGITTTASVTSSINVTSTSSGTVTSVITTGPDGTSLDEGSQQSTLSNASAASGEDPAFTPKVRKEMMGGYHSHPATPQSTVPSPGAASINSIHEEYPDMNSPGWPRTPASPVFNSHVPQDPYRSKKPDSLAKLYEMDDSMERRTWLDKLVNFMEERRTPITSCPTISKNPLDLFRLYLYVKERGGFMEVCKVTKNKTWKDIAGSLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQPIINQVEAGSKKKGSKGTASVPSPGSSNSQDSFPAAGSSNASMDGYGSYQSGYTGGTPGGPSSEYTPPPPRPPSQSSAPSPHQGGSNQGGQNSAKPFDNSVGRSARKSNAAPYPGPLRTPGIQQSSYQNTGSYQNYPQDQYIRPQGNTLSQQGEFNQPYSPRSHYSPYVPDVDRGYPGGNMPPNNASGQDIYNRYSSSQQAGSYPAGTPPNARSNSYPSAPQTHPATVPQQTATSQPSSPSQPSATSSYSCPQDYYRQEQGGYGAPGGTQIYSGGASANKNMPPPPPGPNPPRRHPDFAKDQQYPQYNQPRPTYPGWPNTTNQYNSSSGSSRVSYTSQQPQSQSQPPQQPSQQPMPPVGPVPATPTAGAIASNQQWGNQQPNRTTPQPTLNAIAHAPPPWDHRYSNQPSPLYPAPGNHQTQLGINPMISQQPTSKREMTFPPDSVEATTQLIYKRRKLTRADVAPVEAWRIMMALRSGLLAESCWALDVLNILLFDDSSVSYFGLTHLPGLLDVLLEHFSRSLSDMFESTVNEEDRNWHQSAEGPEVDLGAVTRPIDPEDRTKLLSSSNYTFLSRRGRPVKIISRDEDLFVLDTRRTWDHQECESETEPWQVDICTTKYIVTCFQSEIGSVPFARLLRDEKPPLLQKEVECTDSKDETKVDSNTLETSEFSSQKAAELGDKPKEASEKKQLDKKKKTKTLSDVLSRIKKEPVEMNDLTRELFEKKNDGFKKECETESAKVNNNMGEHFSDIQKSDEELIPTQNGLNDTATANVELEKPEIKVENEDQQESISKEDDNKEGPRLKIRDPAGTLKRRRISDYEDESYSRDEASLYLVTETQDNLARRCVCLSTILRNLTFIPGNEAEFAKNVTFLSLLGKLLLLHHEHPARTQKTRNYDREEDADFADSCSSLQGESEWWWDFLHHIRENVLVMAANIAGHLDLSQHPEEISRPVLDGLLHWAVCPAAHGQDPFPTVGPNSSLSPQRLALEALCKLCVTECNVDLVVATPPYSRLQRLCSVLTRLLCRSEEQVLREFGVNLLHFLSAADSGVARTIALQTPCVALLVAFIEQAESSALGVVNQHGLAALRDNPESMGTSLDMLRRAAGTLLNLARHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVLFQCSRGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00219586;
90% Identity
iTF_00760779;
80% Identity
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