Basic Information

Insect: Lasioglossum oenotherae
Gene Symbol: -
Assembly: GCA_028455765.1
Location: CM052286.1:303327-312556[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00037 0.03 14.9 0.7 2 19 468 485 467 489 0.89

2 16 7.8e-06 0.00065 20.2 2.1 1 23 495 517 495 517 0.98

3 16 0.00033 0.027 15.0 0.1 3 23 525 546 523 546 0.94

4 16 1 85 4.0 1.2 1 23 553 576 553 576 0.97

5 16 9e-05 0.0074 16.8 0.8 1 23 580 602 580 602 0.97

6 16 0.003 0.25 12.0 0.5 1 23 608 630 608 630 0.98

7 16 0.00018 0.015 15.9 2.3 1 23 636 658 636 658 0.96

8 16 0.0028 0.23 12.1 0.1 1 17 663 679 663 680 0.90

9 16 0.99 81 4.1 1.7 1 23 1192 1215 1192 1215 0.97

10 16 3.8e-05 0.0032 18.0 0.5 1 23 1221 1243 1221 1243 0.97

11 16 0.26 22 5.9 4.9 1 23 1249 1272 1249 1272 0.93

12 16 2.4e-05 0.002 18.6 0.4 3 23 1280 1300 1278 1300 0.96

13 16 0.5 41 5.0 0.8 2 23 1307 1329 1306 1329 0.94

14 16 0.025 2.1 9.1 0.7 1 23 1348 1370 1348 1370 0.98

15 16 4.8e-07 4e-05 24.0 0.7 1 23 1376 1398 1376 1398 0.97

16 16 6.3e-05 0.0052 17.3 1.5 1 21 1403 1423 1403 1424 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00037	0.03	14.9	0.7	2	19	468	485	467	489	0.89
2	16	7.8e-06	0.00065	20.2	2.1	1	23	495	517	495	517	0.98
3	16	0.00033	0.027	15.0	0.1	3	23	525	546	523	546	0.94
4	16	1	85	4.0	1.2	1	23	553	576	553	576	0.97
5	16	9e-05	0.0074	16.8	0.8	1	23	580	602	580	602	0.97
6	16	0.003	0.25	12.0	0.5	1	23	608	630	608	630	0.98
7	16	0.00018	0.015	15.9	2.3	1	23	636	658	636	658	0.96
8	16	0.0028	0.23	12.1	0.1	1	17	663	679	663	680	0.90
9	16	0.99	81	4.1	1.7	1	23	1192	1215	1192	1215	0.97
10	16	3.8e-05	0.0032	18.0	0.5	1	23	1221	1243	1221	1243	0.97
11	16	0.26	22	5.9	4.9	1	23	1249	1272	1249	1272	0.93
12	16	2.4e-05	0.002	18.6	0.4	3	23	1280	1300	1278	1300	0.96
13	16	0.5	41	5.0	0.8	2	23	1307	1329	1306	1329	0.94
14	16	0.025	2.1	9.1	0.7	1	23	1348	1370	1348	1370	0.98
15	16	4.8e-07	4e-05	24.0	0.7	1	23	1376	1398	1376	1398	0.97
16	16	6.3e-05	0.0052	17.3	1.5	1	21	1403	1423	1403	1424	0.95

Sequence Information

Coding Sequence: ATGGAGCTGGGGGAGGGACAGGCGAGGATTTGTCGACTTTGTGGCCAGTACGATAGCATGTACATCGATGTATTCAGCGATGAAGGCACCAAAAGACTTTTAGGCCTGAAAATCCATTCGAAAATCAACATTCTGATAGATGAGAGGGATCCTCTGCCCAAGGCGATCTGTGTTCAGTGTCTGGGCAAGCTCGAATTCGTTTGCGACTTCCAAGAGGAGTGTCTTCGCACCCAACAAGCATTATGCGATCGATACAATCTACCATCCTTAACAGAGATTGCTGAAGTAAAGACTGAAGAAACAGCACCGAGCACATCGACAAACAATAACAACAACGACATCGACAAAAATCTTAATCCTCCAGCCAAGGGAAGTGTTAAAGAAGTAGCACAACGTGTTTCGAAAACAACAGCGAAGACTCAGAGAAATTTACGAAGTCAACATCAAGCAAACAGTCACAGTAATGGTATCACTAGCAGCAGCAGTAACAGTAACAATAATAGCAACGGTATCAGTAATGAAGCTGCTAAAGATCAAACCACCGCTGAAAGCACAACGGAGGATAATACAGACAATATCGAAATTGTTCAGAGCATTGGAAATACGCCCACGAGATGGCTCAGAAGTAGGCAAAACACAGAAACTACTTTGACAAATGAAGCTACAACCAATATACCGATCGCGAATAGGCTTAGAAGTCACGTTAGTACCGCTGCAGAGATAAGCGTGAATAGTCCTCGCAGTAATTCCAACGAGACCAGTGGAAAACAACAAGATCCTAATACCATACAAATCCCAACATCCGCTTTGAACAAGCTTCTGACTATCGTGTCGAATTCGCCAAACATAGAAGTGTCCGCAAAGGAATCGAGAAACCAAAGCATTGACACGGAAGATATCAGTTTCACGGTTGAATTGTGTAAAAAGGAGAGTGACGACATTGAGACGGTACGAGCCAGAGTATTTCCAGATCAAGGCTCGTGTTTGGTAGACCAGTCTATCGTTGGTCTTCTACAAAATCAAAGTTGCGTAGAGGTGAACAGTATAATAAACACTATCCTCAGCAGCAGTGTAAAGAATGGTAGTTCGACAAAATCAAAGGATTCGGCCGAATTTGAGCAAAAGTGGCGGGCTTCTCAGAACCCGGAACAACTGTTCAAGATCGATGGAGAGGAGATTCGCGTAGACGACAATGTGGAACACATCGTGACAGATAGTCAAAATGGTTACTCGTGCAAGCTGTGTTGTAAATTTTACGAACGTAAAGACAAATGTATGGTTCACGTGAAGACGCATCTGGGGATCAAACAGTACACGTGTATTTTATGCAACGCGAAATTCGTATGCAAGTCCGACGTGATGAAACATATACGGTGCTCGCATACCAACCCTAGACCGATACAGTGTCCAAAATGTCCAAAGAGGTTCAAATCCAAGTTTTATTTAATGGAGCACGACAACGTGCACAAAGGCGTGAGGCCATACGCTTGCCCGGATTGCGGTCAGAGTTACCATCACAAAGTATCGTTGCAGATACACATGAAATCGCATTTACCCCCACAGAACTTGGCTTGCGAGTATTGCGGTAAAGTGTTCCCATATCGTACGAGACTGTTAAGTCACATCGCCAGCGTTCACTTGAAAAATCGTCGGAACTTCAGGTGCCGATTTTGCTACAATCTCTATTCGAGTCTTGCGGTTTTAAACGAACACATTAAAACGCGTCACGCGACTACCTACACTTGCGAAGTGTGCACCAAAACGTTCAAAGTCGCGTCAAAATACAAGGCTCACGTGTTGCAGCACACCAACCCTAAGCCTTTCGTGTGCACCGTTTGTAACAATAGATACGCGTCGAAAGCATTCCTGAACGAGCATCTACTGAAACACGAGGGGCTGAGGAAACATATTTGCCAAAAGTGTGGCGCGAGATTCGCCCAAGCTAGTCACTTGGCCGCGCATCGGCACGTGCATGGCGAAAAGAAGCACGCTTGTCCGGAATGCGGGCGAAAATTTAACAGACGCGACAATATGAAAATAAAGGAGAACGACGGATTGCCGCACGTTGTTTGCTTGCGGTGCATAGGCGCGTTGGAGTTCTTGTGCGACTTTTACAGCTGTTGTCAGCTCACCCAAAACAAACTCTCCTTGTCGGAGGAAGCTAGCAAATACTCATCGGAGAATACACCTAGAAGAATACCGCAGCAGGAAAACGATGCGGAATCTAACAAGGAGAATGTTCTGCCATCTTCAAACGAAACGAAACGAAGAGGCAAAGTTGCGTCGCCCAGCAAGAAGGACCAGCCTACGAATGAAAACACATTGGACGATAGAAAACAGTTAGCTACGAACAACGCGATTGTTCAGGATCAAAATTTGAAGGACGAACAAAGCAACGACAACGCTTTAACACGCGGAAATCCGTTGTCGATGAAGAATATCTCGAAGAAAGGGTCGAAATCCTTGGATAGCCGTACAGTTTCAATGAAAAAAGGCGAAACAAACGATAAAATAGCTTTAGCAGAACCAAAACGACCCGTAAGAGGCCGGAAACCTCAATTACAGAAACTTAGAGAAGTTTATGTATCCTCGAATAGAATGAAAGAATCTCAGAAAGGTTCGGATGAGACGGAACGCGATGGGAATCAACGTAAGAGACAGTGTCTGGGTACAATTTGTACGAACGGTACATCGAATGTAATCAAGGACGCTGCGATCTTGTCCAAGCCGCAAATCGAGCTACCATTGGAGAATAAAGTAGCAAAGATAGCGACGATACCGTCGAGTAAACGCTATATTAAAAATGATGATGCGAATAAAGATTTAATCGGCGACGTAGCGGAGGCGACTTTGAAGGACGAGTCTTTAAACGAGGAAAGAAAAGGGGAGGGCCCCACAAAAAGCAAAGCGATATCTGTAATCGTGAAGCAAGAGAAAGCAGACGTAGAAGCAATTTCACAAGAAACTGGAAAACCGAACCAACTGGTTTGGATTCCAAATGAGATACTGACAGAGGGACAACCGATCGAATCTGCGATCGACCAGGAACAAGAAATTGACCTGGACTTGTCGTTACGGCTGAGTCCTGAATTGGACGATGATACGGAAACTTCTGATGTCGTCACTGCTCGTACCGATTCAAACGATTCAAGCGATTCAGACAATTCAGTTGATTCAGACGATTCAGACTATACCGACGGCACCGAGCAGCCGAAAACAAATCTGCCATCCGTAGAACAAACTCGCACGACCGTTATAAAATCGTCGCGGGAAAGTCCTGTACCGGTAGTCATTAAACCGGATGTGACCAACAATATCGACGGTACTAAAAATAATTCGAAATTCGATTTACAGTTTTCCCGGGGTAAGATTTCCGAATTGATAAGCGAGAAGCAAAAAGAAGAGATCGAGACTTATTATAGAATTGATATGTCTGCCGTTAATGCGGAAGAAGTACAAAAAAATTTGACGGTAATCGACAAGAAGAACATTCGTTGCAACATCTGCGGAAGTCTTTATCTTCGGATGGACAAGTGTCAGGTACATATTTGGGGCCATTTGCAGATGAAACCGTTCCAATGCAAAGCGTGCGATTTTGCTACGGTAACTGTTAGCAACGTTCGTTGCCATATCAGGAAGAGTCATTTAAAGATCAAACCGTATGCGTGTAAACTTTGCGGAAAGAGTTACGCCACTTGCGGGTTATTGATGCAACATATTAATGGTCACACAGGATCCCGTCCATATAGCTGTAAGATTTGCGATTTTTGTTGCGCGACTCGACAAATGCTAAGCTATCACAGCAGTGTTAACCACAAACCACTCAAGGAAATCAATTGTAAAGTTTGTGGCATAGAATTCTATTCGAGAAGCAAATTACGCACGCACATGCTCGTTCATAAGAAAGATAAAGTGGTCATGTGTAAACTGTGTTCCGCTTATTTATCAAACGCGAAAGCATTGGAAACACACCACAAGAACCTTCACATGCAAGACTATGTCTCCTTGCACAATCATCAAAACGTACATTCTATTGGAAAGTATAAGTGTACTTTATGCCCAAATGTGTACAAGAGCAGTCAAATACTGAAGGAGCATCTCTTGAAGCACGAAGGAATTAGGAAGTACAGGTGTAGTGATTGTGGCAAGACATTCGGACAACAGTCTCATTTGGCTGCTCACAAGGCAGTGCACAGCGGTGTTAGATTCTATTGTCCTGGATGCGAGAAATCTTTCAATCGTCACGACAACATGAAGATACATACGAAACGGTGTAAACCGTTTCTCGCAAATCCAGAACTGAAGAAGCTTTTAATAAAGAAAGAAAGGAGTTCTTCGTCTAGCAAAATAAACAAGTCAATGGAAGATACAACCAGCAAGGATTCTTCATCGTTGAATTTCGAAAGTTTGTTCGAGAAACAGACCGACACTGAAGAGATATCGATAAAGACTGTAAACGACAAAGAAGAGACTGCAATGAAATTAGGGTTGAATATCTCTTGCATCGAATCCCCGGATAAATCGTGGATTCGCGATAATGTGTATCAAGAGATTTGGGATCGGAAAGTTTCCAATTGCTTCTCGATTGAAGCGTGGCTAGAATCGATACAATCTCTGCACGTGCGCAAATCTCATTACAACAGTGCCGAACAGTACAAACTAGTAGAGTTCATTACTATTCAATGA
Protein Sequence: MELGEGQARICRLCGQYDSMYIDVFSDEGTKRLLGLKIHSKINILIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQQALCDRYNLPSLTEIAEVKTEETAPSTSTNNNNNDIDKNLNPPAKGSVKEVAQRVSKTTAKTQRNLRSQHQANSHSNGITSSSSNSNNNSNGISNEAAKDQTTAESTTEDNTDNIEIVQSIGNTPTRWLRSRQNTETTLTNEATTNIPIANRLRSHVSTAAEISVNSPRSNSNETSGKQQDPNTIQIPTSALNKLLTIVSNSPNIEVSAKESRNQSIDTEDISFTVELCKKESDDIETVRARVFPDQGSCLVDQSIVGLLQNQSCVEVNSIINTILSSSVKNGSSTKSKDSAEFEQKWRASQNPEQLFKIDGEEIRVDDNVEHIVTDSQNGYSCKLCCKFYERKDKCMVHVKTHLGIKQYTCILCNAKFVCKSDVMKHIRCSHTNPRPIQCPKCPKRFKSKFYLMEHDNVHKGVRPYACPDCGQSYHHKVSLQIHMKSHLPPQNLACEYCGKVFPYRTRLLSHIASVHLKNRRNFRCRFCYNLYSSLAVLNEHIKTRHATTYTCEVCTKTFKVASKYKAHVLQHTNPKPFVCTVCNNRYASKAFLNEHLLKHEGLRKHICQKCGARFAQASHLAAHRHVHGEKKHACPECGRKFNRRDNMKIKENDGLPHVVCLRCIGALEFLCDFYSCCQLTQNKLSLSEEASKYSSENTPRRIPQQENDAESNKENVLPSSNETKRRGKVASPSKKDQPTNENTLDDRKQLATNNAIVQDQNLKDEQSNDNALTRGNPLSMKNISKKGSKSLDSRTVSMKKGETNDKIALAEPKRPVRGRKPQLQKLREVYVSSNRMKESQKGSDETERDGNQRKRQCLGTICTNGTSNVIKDAAILSKPQIELPLENKVAKIATIPSSKRYIKNDDANKDLIGDVAEATLKDESLNEERKGEGPTKSKAISVIVKQEKADVEAISQETGKPNQLVWIPNEILTEGQPIESAIDQEQEIDLDLSLRLSPELDDDTETSDVVTARTDSNDSSDSDNSVDSDDSDYTDGTEQPKTNLPSVEQTRTTVIKSSRESPVPVVIKPDVTNNIDGTKNNSKFDLQFSRGKISELISEKQKEEIETYYRIDMSAVNAEEVQKNLTVIDKKNIRCNICGSLYLRMDKCQVHIWGHLQMKPFQCKACDFATVTVSNVRCHIRKSHLKIKPYACKLCGKSYATCGLLMQHINGHTGSRPYSCKICDFCCATRQMLSYHSSVNHKPLKEINCKVCGIEFYSRSKLRTHMLVHKKDKVVMCKLCSAYLSNAKALETHHKNLHMQDYVSLHNHQNVHSIGKYKCTLCPNVYKSSQILKEHLLKHEGIRKYRCSDCGKTFGQQSHLAAHKAVHSGVRFYCPGCEKSFNRHDNMKIHTKRCKPFLANPELKKLLIKKERSSSSSKINKSMEDTTSKDSSSLNFESLFEKQTDTEEISIKTVNDKEETAMKLGLNISCIESPDKSWIRDNVYQEIWDRKVSNCFSIEAWLESIQSLHVRKSHYNSAEQYKLVEFITIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00863429;
90% Identity: iTF_00863429;
80% Identity: -