Basic Information

Insect: Lasioglossum oenotherae
Gene Symbol: ZNF236
Assembly: GCA_028455765.1
Location: CM052297.1:1240877-1246694[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4e-06 0.00012 22.5 2.1 1 23 44 66 44 66 0.98

2 16 0.00024 0.02 15.5 3.3 1 23 72 94 72 94 0.99

3 16 0.0038 0.32 11.7 4.9 1 23 100 122 100 122 0.98

4 16 0.0031 0.26 12.0 6.0 1 23 237 259 237 259 0.98

5 16 3.5e-05 0.0029 18.1 4.8 1 23 265 287 265 287 0.99

6 16 0.00016 0.013 16.0 0.7 3 23 295 315 293 315 0.97

7 16 0.0003 0.025 15.2 7.6 1 23 321 343 321 343 0.98

8 16 0.14 12 6.7 1.9 2 23 737 758 736 758 0.96

9 16 0.00096 0.079 13.6 1.5 1 23 764 786 764 786 0.97

10 16 1.3e-07 1.1e-05 25.7 1.4 2 23 886 907 885 907 0.98

11 16 0.00055 0.045 14.3 3.5 1 23 913 935 913 935 0.99

12 16 0.00018 0.015 15.8 1.9 1 23 941 963 941 963 0.98

13 16 0.13 11 6.8 1.5 1 16 969 984 969 986 0.89

14 16 3.7e-06 0.00031 21.2 0.6 2 23 1207 1228 1206 1228 0.97

15 16 2.3e-05 0.0019 18.7 3.6 1 23 1234 1256 1234 1256 0.98

16 16 0.073 6 7.7 0.3 1 15 1262 1276 1262 1278 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4e-06	0.00012	22.5	2.1	1	23	44	66	44	66	0.98
2	16	0.00024	0.02	15.5	3.3	1	23	72	94	72	94	0.99
3	16	0.0038	0.32	11.7	4.9	1	23	100	122	100	122	0.98
4	16	0.0031	0.26	12.0	6.0	1	23	237	259	237	259	0.98
5	16	3.5e-05	0.0029	18.1	4.8	1	23	265	287	265	287	0.99
6	16	0.00016	0.013	16.0	0.7	3	23	295	315	293	315	0.97
7	16	0.0003	0.025	15.2	7.6	1	23	321	343	321	343	0.98
8	16	0.14	12	6.7	1.9	2	23	737	758	736	758	0.96
9	16	0.00096	0.079	13.6	1.5	1	23	764	786	764	786	0.97
10	16	1.3e-07	1.1e-05	25.7	1.4	2	23	886	907	885	907	0.98
11	16	0.00055	0.045	14.3	3.5	1	23	913	935	913	935	0.99
12	16	0.00018	0.015	15.8	1.9	1	23	941	963	941	963	0.98
13	16	0.13	11	6.8	1.5	1	16	969	984	969	986	0.89
14	16	3.7e-06	0.00031	21.2	0.6	2	23	1207	1228	1206	1228	0.97
15	16	2.3e-05	0.0019	18.7	3.6	1	23	1234	1256	1234	1256	0.98
16	16	0.073	6	7.7	0.3	1	15	1262	1276	1262	1278	0.90

Sequence Information

Coding Sequence: ATGATCCATCCGAAGCAAAAAAAGTTGGATGCACGGACAAATTTCGTTACCTTGCTGGACCGAGCATCGGATAGCGGTACCAGAAAATACCTGACGATAAAGCAACGGTGTGTAGGGAACATAAGATGGTACGCGTGCACGTTTTGCCATAAAGAGTTTAAGAAACCATCAGACCTGATACGCCATTTACGAGTGCATACGCAGGAAAAACCATTCAAGTGCACGCACTGTTATCGTTCTTTCGCTTTAAAGTCCACCATGATAGCGCATGAGCGTACTCATACAGGTACCAAGAGATATGCCTGCAGTACTTGCGATAAAACGTTTACGTGCCACAGTAGCTTGGTTATTCATACAAGATCGCACGGGAACTCTGACGAATGTTTTAGCATATCAATTGGTAACGGTAACAATAATGATAACGGCACTGGCCATGATCACGGTCACGGTCACGATCGCGATCATAATAATGATAACGATAACGGTAATGCCGATATTGACGCAACCGTTAACGTAGTCGCTCGTTGCAGTAATCGACAGAACATTAAAGCAAACAAGTCAAAGATGTCTCCGAAAACGGAGAGCCTCGCGTCTCAAGTGATACTGCAGGAGCCGTTGGTAATCAGTGACTCCGGAAACAAGATATGCGTGGTACAGATACCTTCGAAAAAACGTGTTTACGATGCTGCGATCGATCCAGCTAGGCCGCATAAATGTTGGGTGTGCGAAGCGGCATTTCGAAAGATCAGTCATTTGAAGCAACACCATCGACGACACACCGGAGAACGTCCTTATAGATGTTCCAAATGCGACAGGAGATTCACGTCGAACAGCGTTTTGAAATCGCATTTGCACACGCACGAAGACTCCAGACCTTACGGGTGTTCCATTTGTTCCGCAAAATTTTCCACGCAGAGTAGCATGAAAAGACATTTGGTTACTCACAGTAACAAACGACCGTTTATGTGTCCATATTGTCACAAGACGTTCAAGACTTACGTGAATTGCCGTAAACATATGAAAATACACAAACACGAGTTGGTGCAACGGCAACTGGAGCAACAAAAACTGGTATCGCAAGAACAGATTACGAATAAGTTGAATGCGAAGGAGAGCTCTAAACCAGAAACAACGACCGAGTTATCTTGCTGCTCTCCGTCCAGTTTTCCTTCCGGTAACGTTAACGATGTTCCACTCGACGTGTCTGCAGATACCGACACCGGCACCGGAACCGTTGTCGCAACAACTTCCACGTTTTCCGACAATCCGCTGTCTTCAGTCAACTTATCTTTCCAAGAACGAATGGGATCAACCTTTCCACATACTTTCCCACATCAATTTCAAAGTGTGATCGAAGCGAAAGAGAAAATAAGGCCACTTTTATCGACGAACTTCGCCACTTCGACATCTATTAATCAAAATATGACTGAGATAACCGTGACAAATCTAGAAAATCCACAGATGTTGCATATCGATGAAAGCGGCTCGGTTACATTACCAGTTTATTCGACCGATCAAGCTCTAACACCGGTGAGCATGCAAGAAATTGAAGAGACATTGAACCAGCAGCTTTTCAACATCGGAATGAACCTTGGTTTGGGAAGCGATCATTCGAAGCATTCCTGTGATACCAGTGAATTGCAGAATGCAAAATTGCAGCATCAGCAACCTGCGTTAAATGTCATTTACACGAGTAACAACAATTCTAATAACGGTAACAACGCGGAACAGTCTGAAGAGCAAGTGTTCGCGTCGCAGCTGGACTCGTTCGAGATTGATCATATTACTTTGCAACCGGATGCTGAAATGACACTAGACAATATTGGCCTCGAAACGAATAATTCGACGAGTATGGCAAGCATATTGCCGCAAAGTGTGAAAGGAGATTTATCGAATCAACTTGCCATTTCGGCTGTTTCGCCTGAGAATCTGACCGATGGTCACCAAGCAAGTGGGTACATGCAAACCGTGTTGCTAATTTCCGAGCAAAATCTCACAGTAAAAGAAAATGCGAGCGATCAATTGAAAATACGCGAGACTGAAAAGAATGCGGATGGAGTCGTAAACGATCCAACGTTCTTAACGGAACAGTTTCGGAGGACGTCCAAGGTTTCGTCAAAGAGCCAGAAAGTATCTTTGTCGTTCGAGTCTCTTTGTCCAAACGATGAGATCAACCCAAATCACTCGCAACAGGGGGAGTCTTTGTTGCAGTGCCATATGTGTAGCCAGCAAGGATTTACGGCAACCAAGTTGAAGGAGCACTTGAAGATCCATCGCGGTAAGAAGGAATATCAGTGTACGGAATGCTCTTCAAGATTTTACACGAACGGTGGATTAAACAGACACTCGAAACTACATACGAATAAACAACAATGGAAGAGTAGTTCATCATGCGAAAAATATCTCGGTGATAGAACGCAATCGCGATCGCATAGCAAGGTTCATGAGAGCTTCCCGTGGAACGATAAGGATGTTTCAATTTTGTCGCAAATACCGGCAACGGCAGATAACGAATCGTCGTTGAACGACGTCACAATAGATTCCGATTCAACCGTGTCCGAAAGAGTTCTATTGGACACGGTTGCGGAACGAGAGGTGATGGATCGAGTACAGCACGTAGCAACGGAGAAAAAGGAACGAAAGGAGTACACGAATAAATGTAAATATTGTCCGAAAACGTTTCGTAAACCAAGCGATCTCGTTAGACACGTCCGTACGCACACGGGGGAACGTCCATACAAGTGCGACTATTGCAGCAAAAGTTTCGCTGTGAAATGCACGTTGGACTCTCACACTAAAGTTCATACCGGCAAAAAGACGTTTCGTTGTCACGTGTGTAGCAGTTTGTTCGCGACGAAGGGCAGCTTGAAAGTACACATGCGTTTGCATACAGGTTCGAAACCGTTCAAATGTTCCATCTGCGATTCGAGATTCCGGACCTCGGGGCATAGGAAAAAGTCGCTATGGCGACAGATATTGAAAAAATCTGGCGATGCTGGTCGACAAGAGGTGTGCAGCTACAGAGAAGAACAAGAATCGCAAGAGCAACAGCAAGAACAGCAAGATAATCAGCAGCACTACGAGCAAACGTCGCAAACAACAGAGGCAGAATATTCGAATTTGCAAGCAATTAACGTCGAGACAACTGCTTCGTGTTTAACCGACCAAATCACATTCGAGGCGGAGGGAACCGTTCCGAACAATAATTCGATACTGTCCGTAAGCGACGGTAACCAATTGGTAGCCAACTTACATTTTCTTCTGGCGAACGGTCTCGTTACCATACAGACTGACGAATCGTTGTTAACCCAGCCGGCATCGACTGGCAATACACTGCATCAACAATCGACTGTTGTTGCCGATTCTGTCTGCGCATCGATGATCAATATTACCCCTGAGATCGGTACCGACCAAAGTATTGCTGCTAAAGAAACGATTCACGTGGAGAACGCACTGAAAGCGCAACTATCGTCTCCGTATCAATTGCAGTCAAACAACTGTCTTTTAACCAGCGTTGCAGCGCCATCGCGGATAGCACAGTTCGCGAAGGTTCCAACCGTTGAGAAGTGTTTGCCGACACTAGAGAAACCCTCTACCAAAGGAACTTCGTCGAAGAAAGAATGCGACGTTTGTGGGAAAACGTTCACGAAACCGTATCAAGTCGAACGTCACAAACGAATTCACACGGGCGAACGACCGTACAAGTGCGATTTATGTGTCAAATCGTTCGCCCAAAAATCCACGTTACAGATGCATCAAAAGCACCATACAGGCGATCGACCACATCCTTGTCCACGCTGCGAATATTCTTTCACACAAAAAGATGACATGTCGTTCATTGAATTTCTTAAATAA
Protein Sequence: MIHPKQKKLDARTNFVTLLDRASDSGTRKYLTIKQRCVGNIRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHTGTKRYACSTCDKTFTCHSSLVIHTRSHGNSDECFSISIGNGNNNDNGTGHDHGHGHDRDHNNDNDNGNADIDATVNVVARCSNRQNIKANKSKMSPKTESLASQVILQEPLVISDSGNKICVVQIPSKKRVYDAAIDPARPHKCWVCEAAFRKISHLKQHHRRHTGERPYRCSKCDRRFTSNSVLKSHLHTHEDSRPYGCSICSAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELVQRQLEQQKLVSQEQITNKLNAKESSKPETTTELSCCSPSSFPSGNVNDVPLDVSADTDTGTGTVVATTSTFSDNPLSSVNLSFQERMGSTFPHTFPHQFQSVIEAKEKIRPLLSTNFATSTSINQNMTEITVTNLENPQMLHIDESGSVTLPVYSTDQALTPVSMQEIEETLNQQLFNIGMNLGLGSDHSKHSCDTSELQNAKLQHQQPALNVIYTSNNNSNNGNNAEQSEEQVFASQLDSFEIDHITLQPDAEMTLDNIGLETNNSTSMASILPQSVKGDLSNQLAISAVSPENLTDGHQASGYMQTVLLISEQNLTVKENASDQLKIRETEKNADGVVNDPTFLTEQFRRTSKVSSKSQKVSLSFESLCPNDEINPNHSQQGESLLQCHMCSQQGFTATKLKEHLKIHRGKKEYQCTECSSRFYTNGGLNRHSKLHTNKQQWKSSSSCEKYLGDRTQSRSHSKVHESFPWNDKDVSILSQIPATADNESSLNDVTIDSDSTVSERVLLDTVAEREVMDRVQHVATEKKERKEYTNKCKYCPKTFRKPSDLVRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFKCSICDSRFRTSGHRKKSLWRQILKKSGDAGRQEVCSYREEQESQEQQQEQQDNQQHYEQTSQTTEAEYSNLQAINVETTASCLTDQITFEAEGTVPNNNSILSVSDGNQLVANLHFLLANGLVTIQTDESLLTQPASTGNTLHQQSTVVADSVCASMINITPEIGTDQSIAAKETIHVENALKAQLSSPYQLQSNNCLLTSVAAPSRIAQFAKVPTVEKCLPTLEKPSTKGTSSKKECDVCGKTFTKPYQVERHKRIHTGERPYKCDLCVKSFAQKSTLQMHQKHHTGDRPHPCPRCEYSFTQKDDMSFIEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -