Loen014450.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lasioglossum oenotherae
Gene Symbol
JARID2
Assembly
GCA_028455765.1
Location
CM052294.1:8959477-8963850[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-23 9.5e-20 70.9 0.0 6 89 583 664 579 664 0.94

Sequence Information

Coding Sequence
ATGTCAACCGAACAGATTGAGAAATGGTTGAATGAAAGTTCCCTTGCCAAAGAAGAGAGCAAGTTAGAAATGGAAAATGTATCCATGTTTAAGTATGAAATGTGTGAGAAAAAGAGTGATGTCTCGCATTTATCTATTTCAACGAAAATTCAGCATTTAGTAAGGCCAGTGAATGTCACGCTTTCGAAATTAGCAGAAAAAGCAAGCATGAAAGATCGTTTAAGTGTGCAGAACAAATATGTCCCTATTAAAATAGTGGATTCACAATCTGTTGATGCAAAACAACAAAATGAATCGACCAGTGGTGTTAATAAAAATAATGCAGATCTTAAAGAAATCGTTAAAGGAAAAGATACAAAGCCAAATAAAGACTCCAGCCCTGGGGAAGACAATGACGCAGCATTAAAGTCCGATCACATTAAAGAACGCAAAACAGTAACTCCTAACGCAAATGCATTTTCTCCGGAAAATGAAAGTAGCGTTTACGCGTTTGAAAGTGATACTGAAGTTCCTGTTAATACACCTTTTAGACGTAAAATTCGCGAATCTAATAAGTTATCGAATGCATCACCGGAGAATGACACACATAAAAATGTAGACAAAGTTAACAAAGACGATAGTCAAACATCAGAATCGAAGGAGACTCCTGCTAGTAGTATATCTCCAAAAACTGAAAATAAAATAGTAGAATCGATAAATACATCAAATTCGTTATTAAATATTAACAGGTTCGAGTTACCTAAGAATTTTGCTACCTTAGCCAATATACAAGTTTTACCATTAGATAAATTAACAACAACTTGGAGCAATGTGAACTGTAGTGCTTCGATAGCTGTTCAAGTGAATCTTGATGATAATGCACAAGCGCAAGAACAGACAACAGGGGAAAAAGACGTGAATCAACAAAAAAGCACTGAAACATCTACTCAAACTGAAAGTAGTAATGAAAATGATGATGAAAACGACGGTCAATTATTTTACATACCTTTGCAAGCAGTTACAAGAAATGGACCAAATTTAGTTCAAGGACAACAGTTGATTCAAGGTGTAGCTGTTAAACTTGGTACCGAAGGGCCAAATGGACCTAATCAGAAAGTTCTTTTGAGAGCAAAGTTAGTTACTAAACCGCCATCATCAATTGCGCGTTGTCCTCCTATAGGTACAGTGCAACCTACAACACGTACACCACCAAACTCAACTCTATTATCAGCAGACAATCCATTACCATCTACTTCATCCAGTACAACTTCAGTTATGGCTGCACCAAATTCTGAAATTCCACCATCTTCCCCATGTAAAAGTGAAACTACACTACGAACATCGAGTAGACAGAGCAGTAGGTCTGTAGCAACAGAAAAATTAACAAAATCTCCAAAAACTTCTAGAGAAAGAAAAACATCTATCGATTCGAATAAGAATGGGAAGAGATTTCAAATTAAATCTAAACAGAAAAACACTGTAATTTGTTCTCCAACAAATAATGTAACTTTTCCAAGTGCGAAAAATGAAAACAATGAAGCACGCTTAGTGGAAGCACCTACATTTCAGCCTAGTGAGAAAGATTTTCAAGATCCTTTAGAATATATAGACAAAATAAGGCCAATCGCAGAGAAATTTGGAATATGTAGAGTTGTGCCACCACCTAATTTTAAGCCGGAATGTAAAGTATCAGACGATATGCGGTTTACCGCATACAATCAGTATGTACATCGTATGCTTCATAGATGGGGACCTAACGTAAAAGAAATGATGGCTATTAAGAAATATTTAGCTACACAAAGCATAACTCTCACTCATCCACCTTGGATTGGTGGGATGGAAGTTGATTTGCCTCACTTGTATCAAACAGTTCAAAGTTTAGGAGGATTAAAAGAAGTTATTGAGAAGAAGAAGTGGCAAAAAGTAGCTGATGGTATGAAAATACCAAAGTCTGCTCAGGATCGTGTAACTAAATTAGATGACATTTATTGTAAATATTTATTACCATACGACACATTATCTCCAGAGGAACGAGGTAAATTGTTCGATGAAGTTGAATCGGAATGGATGAAACGAGAAAGCAGAGCACTGCAAAGACAAAACGCACCCATAAATGATAACGAGGAAGATGAAGAGGACGATAGTTCTGATGAATTTGAAGAATGCATTGTAAAAGGTAGAAATATGCCGTTAAATGCTTTCTACCGAATTGCGAGAAATACGCAACGTATGTGGTTCGGTGAGAACCAGCGATCTGGAAACGAAACTGAGGGTGCCTCCGCTGATGAGGTTGAAAGAGCATTCTGGAAGCATGTTGCAGAAAGGAAGCGGCATGTCTGCGTACATGCTGCAAGCATCGATTCTAGTGGTCGTGGTTTTGGATTCTCTGTTGCCAAAAATAGTCCGTTCGCTAGACATCCATGGAATCTTAAAGTGCTTACTAATAATGCTGGTTCAGTGTTAAGAGCATTAGGCCCAATAATGGGTGTGACAGTGCCAACACTCCATGTTGGCATGCTATTTAGCGCATGTTGTTGGTACCGTGATCCTCACGGTCTTCCATGGATAGAGTATTTACACACAGGTGCTAAGAAAATCTGGTATGGTATACCGGACGAGCATAACAATAACTTTAGGGAAGCACTGTCAAAAATGGTGCCACGATATTGTAAAAATAAAACTATATGGTTACCATCTGACACAGCAATGGTTCCTCCAGAATTATTGGTTAATAACGGAGTATCACTATGTCAGACCGTACAAGAACCAGGCCAATTTATAATTGTATTCCCCAAAGCATTTACATCAAGTATATGTACTGGTTATGTAGTATCTGAAAGTGTTTACTTTGCACAACTGTCTTGGTTGGAAACTGCTGAACAAGTATTTAAAGATATACAAGATAGCTGTGAACCATCTATATTTTCATTCGAAAGGTTGTTATTTAATATTATTAATGACTCTAGATCCCATATAGATGTAATGAAACAGATTTTACCAAGTGTGATTAAAATTCGAGAGAAGGAAATAACTTACCGAAAACAATTAAAAGCAGTGGGTCTTACAAATACAGAAAGATTACCATTACCAGATAGCGGAAAACGAAAGAAAGGGAAAAAAATTAGTAATTCACAAGATGATAGTGTTTATTGTCCATCACATGCATTGCAATTACTTAATAGGAAGAAGCAAGCTTTAAAACACTGTACTTTGATGTATACATACAACGAGGATGAATTGGATGATTTAATTCACAAATTAGAAGACAGAATTGAAGCCAAATCTAAAAAGACTAATCAAATTAAACAAGCTAAATAA
Protein Sequence
MSTEQIEKWLNESSLAKEESKLEMENVSMFKYEMCEKKSDVSHLSISTKIQHLVRPVNVTLSKLAEKASMKDRLSVQNKYVPIKIVDSQSVDAKQQNESTSGVNKNNADLKEIVKGKDTKPNKDSSPGEDNDAALKSDHIKERKTVTPNANAFSPENESSVYAFESDTEVPVNTPFRRKIRESNKLSNASPENDTHKNVDKVNKDDSQTSESKETPASSISPKTENKIVESINTSNSLLNINRFELPKNFATLANIQVLPLDKLTTTWSNVNCSASIAVQVNLDDNAQAQEQTTGEKDVNQQKSTETSTQTESSNENDDENDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSSIARCPPIGTVQPTTRTPPNSTLLSADNPLPSTSSSTTSVMAAPNSEIPPSSPCKSETTLRTSSRQSSRSVATEKLTKSPKTSRERKTSIDSNKNGKRFQIKSKQKNTVICSPTNNVTFPSAKNENNEARLVEAPTFQPSEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVESEWMKRESRALQRQNAPINDNEEDEEDDSSDEFEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNETEGASADEVERAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVNNGVSLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQLSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDSRSHIDVMKQILPSVIKIREKEITYRKQLKAVGLTNTERLPLPDSGKRKKGKKISNSQDDSVYCPSHALQLLNRKKQALKHCTLMYTYNEDELDDLIHKLEDRIEAKSKKTNQIKQAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-