Lmar014466.1
Basic Information
- Insect
- Lasioglossum marginatum
- Gene Symbol
- Gata6
- Assembly
- GCA_028455795.1
- Location
- CM052245.1:11059585-11067392[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.96 2e+03 -1.3 9.8 1 26 592 615 592 618 0.83 2 2 9.7e-16 2e-12 46.7 10.7 1 35 648 681 648 682 0.97
Sequence Information
- Coding Sequence
- ATGAAGGAGAGCCTGGTGAAGCGCGAGATCGAACACGAGTGGGAGGAAAGTCGTGTCGACGAGGGTTCGTGTCGGATGACCGGAAGTGGAAACTCAACCGGAACCTCGATCGAAGAACAAAGACAAGCGATGGAGAGTCCTCGAACGGTGATCACAGCCAGAAGGCACGTGCGCACGATCACGACGGCTGGCCACATTACCGAGAACGTACCGGAAACCGAGCCAGAACCAGGACCCGATTCTCCGGACACGAACGCAATGTCCGGCATTCTTCAACTCCAGGCACATCATCGCCATCAGCTTCAGCAACAACCGCTCGAGCAACAGCATCGGCAAACTCAGTCGCGCAGCTATCAGGAAGGGGAGCAACAGGATCCGGGGAACCAGCAATCTGCGGAACACTTTGTACAAATGTCGCGGGCGGACGCGGAGGTGCAACAGCAGCAGCAACACCATCGGGTCGGCGAACAGCAACGTGTCGTTTATCTGACCAGCAACGGACAGGAATTGAAGGTGGAGGTTTCAGAGACGGTCGAGCACGGCGCGCTATCCGTCAAGGAGGAATCGACGAGGTACGAGGCCGCCGACGGACCGGATCGGAACGAGATGGAGAACATGTACGTGTACGCGACGGACGGTCAGCAATTACGAAGGGAGAATCACGGCATCGCGATTCAGATGCAAGAGAGACGTGGTCATGCAGCCGCGACTCAACAGAGGTATAGCCCACGAGAGTCTGGTCAATCAAGCGGAGGAAATGGATCGGCCGGTAGCAGGACGTATCATCACGGATCGCCGGTATTGGTTGCGAGCACAGACGAATACGAAGGAGGAACGAATGCAACAACCGGAACCGGAACGAGCACGGAAAGCGCCACCGGAACATCTGCGGGACCAGGCTCCGCCTCTGGCTCCGGCTCTGGTTCCGGATCCGGTACTCCGACCGTCCAGTTAGGTTCGCCCGCTGCTCCTGCGTATTCTCCACCGATCGTCGACGGTATCCCTGGTTcggcgtcgagcgggtcgcagcaagctgcggcgcaacagcaacagcaacagcaacagcaacagcaacaacaacaacaacaacagcaacaacagcatcatcacgtggtgggatacgtcgacTCGGTGGTGGATAGATTCGCAGTCTCGGTCGCGAACGACAAACAGGTGTCCAGCACGTACGCCACTTTGAAGACGGTGGCGATACCCCCATCGCAACCTGTACAGTACGCCGCGCAATACCTTCACGGGAACGAAACGTTTCAACCAGCTCCAACCTATGCTTATAACAAATCAGGAGAGCAGCTGATTCTGACATATCCGACGGCCGGTCAGCTGGGTCCGTGCGTCGGTGGTGTGGAGTCTCCCGGCAGCAGTTACATGAAAGGCGATCCGACGCTGGCGTCGTCGGTGGCAGCGTCGCGCGGCGTATCGCTTCACTACGAACAGCCGAATTCTCCGAGTGCTCAGATGACGTTATACGGAGGCGGAAGCGCCGCGTTCTCGTACGCGAGGCCAACAGCCGGCGCGGAATATTGGAGCACAGCGGGTACACCTTCGCCGCCTAACTTCGACGGTAACCAGGCTTATCCGCCAGGAGTGGCCACCATTCCGATCGGCGACGCGACCAATATGCAGTTGTGCTCCGGTGGAGGGTACAGCCTGTCGCCCGGTACCGCCGGAGCACCTTCCCCGTGGTCCGGTCTGCCGATGTCCACGTCCGATGAGAGCTTCGACGGAACAATGATCATCGCCGAACAAAAAGAGTGTCCCAGTTGCACGAGTCTGACCAACGTCTGGAGGAGGGACGAGACCGGACACTATTGCTGTGCCAACTGTTTCTGCAAACCGAACGGAGTCAACAGGGCTGCCATGAGATGCGGCAAGCCGAAACAGACGGTCGCCCCGACGAACGTGCGCAAAACGGGTATGCAGTGCGCGAACTGCAGGACCTGCAACACGACCCTCTGGAGACGAAACAACAACGGCGAGCCGGTGTGCAACGCGTGCGGACTCTACTATAAGCTGCACAACGTAAACAGGCCGCTCAGCATGAAGAAGGAAGGTATTCAAACGAGAAAAAGGAAACCGAAAAATCACACTGCTATTAGCGGGAATTTGGCCGGGCCCAGCAGCATGCACAAGACCGAGATTAAGTCTAACTTGCTCGTGGACTCGCTGCAGCTGAACGTGTACGGGATCGGTGGCAGCGGAAGCGAACGGTTGGAGGAGAACCGTCTGCCTGTAGGTACACCGACAACGATGCATTTGGGACACGCGCACTCGCCCCTCGCATTACCCACCGCCGCCGTTCTGAATCGTCAAACCACCCTTACCGTGCCACCGCTAGAGCCAATCGCTAGTCAGCCCAGCGTCGACGCGATCTCCGTTATAACTTCTACGACGGCTGTCCACGCTGAGAGAACTATCTAG
- Protein Sequence
- MKESLVKREIEHEWEESRVDEGSCRMTGSGNSTGTSIEEQRQAMESPRTVITARRHVRTITTAGHITENVPETEPEPGPDSPDTNAMSGILQLQAHHRHQLQQQPLEQQHRQTQSRSYQEGEQQDPGNQQSAEHFVQMSRADAEVQQQQQHHRVGEQQRVVYLTSNGQELKVEVSETVEHGALSVKEESTRYEAADGPDRNEMENMYVYATDGQQLRRENHGIAIQMQERRGHAAATQQRYSPRESGQSSGGNGSAGSRTYHHGSPVLVASTDEYEGGTNATTGTGTSTESATGTSAGPGSASGSGSGSGSGTPTVQLGSPAAPAYSPPIVDGIPGSASSGSQQAAAQQQQQQQQQQQQQQQQQQQQHHHVVGYVDSVVDRFAVSVANDKQVSSTYATLKTVAIPPSQPVQYAAQYLHGNETFQPAPTYAYNKSGEQLILTYPTAGQLGPCVGGVESPGSSYMKGDPTLASSVAASRGVSLHYEQPNSPSAQMTLYGGGSAAFSYARPTAGAEYWSTAGTPSPPNFDGNQAYPPGVATIPIGDATNMQLCSGGGYSLSPGTAGAPSPWSGLPMSTSDESFDGTMIIAEQKECPSCTSLTNVWRRDETGHYCCANCFCKPNGVNRAAMRCGKPKQTVAPTNVRKTGMQCANCRTCNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKEGIQTRKRKPKNHTAISGNLAGPSSMHKTEIKSNLLVDSLQLNVYGIGGSGSERLEENRLPVGTPTTMHLGHAHSPLALPTAAVLNRQTTLTVPPLEPIASQPSVDAISVITSTTAVHAERTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00860801;
- 90% Identity
- iTF_00863639;
- 80% Identity
- -