Lmar011169.1
Basic Information
- Insect
- Lasioglossum marginatum
- Gene Symbol
- SNAPC4
- Assembly
- GCA_028455795.1
- Location
- CM052268.1:2810047-2812791[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.29 3.2e+02 1.7 0.2 3 18 165 180 164 181 0.92 2 5 4.9e-11 5.3e-08 33.1 0.4 1 45 273 319 273 320 0.95 3 5 2.7e-10 3e-07 30.7 0.5 4 43 330 373 329 376 0.97 4 5 6.8e-12 7.5e-09 35.8 0.0 1 45 382 427 382 428 0.96 5 5 5.7e-09 6.2e-06 26.4 0.1 4 40 438 474 436 476 0.88
Sequence Information
- Coding Sequence
- ATGGATGAGCCGACGGACGACGATGATTTGGAGCAACTCCTATCGTTAGAAATCGAGTCTCCCAAACGGAAAAGCAAGCACGATTTTGCATGTATCTTTCCGGTCGAAAAATCAGTGACGGCCGGTAAGTCGCAAGTGTTTCCAAAAGAGTCTACGTTTCAAAAGAAACCGGAACATCAAAGGGAAAATATGATTTCGGAATGTAGCATCGAGGATTGCGACAAGTTATTGAGTTACAACAAGCAGATCATATCTGTTCTGCTCGATTTAAAGAAACACATAACCTACGCTCTTGAGAAATGTGAAACGAAATTGTCAGTTATAGAGTCGGGCCTTGAGAAACATGGAGCTGGAGACACCAGAGCTTTAATTTGCAATGCTGGTATACCATATTTCAAGGACAGGAATCATTTCTTTGCTCCCAATAACGACGACGAACTGTTGAAGGAGAATAATAAGGAATTGCAACTCAGGAATCTTCCCAAAGTAGCTTCTTGGACGATCAAAGAAAGGAAAACGTTACTTAAAGCGATACAGGAGGAAACCATCATAGCTTCTAACAAGAGTAAGTTTGTCGACCTCGACGAGTCAACGTACGATTCAATGTGCGAGTCTTCATGCGAGTCTACATGGAAACCCGACAAAAGTACGAAAGGCAAAAACAGAATAGCGACCGATGATCACGACAAACAGATTGTCCAGATGCAAGACAAAGATTTTGACTGGTTCAATATATCGTCTGATTATTTCGATTACGCACACTCGCCGCTGGATTGTCGAGTCATGTGGAACGTTTTCCTGCATCCTCGGATTAACAAAAGCTCCTGGACGAAGTCGGAAGATGTGAAATTAAAAGAGATTACGAAGAAGTACAAATTTCAGAACTGGGACAGAATCGCGGAAGAGTTGGACACAGATCGTTCCGCTTACCAATGTTTCATCAGATATAATACCATAAGGAAACTGTCGAAAGATAAAAATTTTATATGGAAACCCGAAGAGGACAAGAAACTTTTAAAATTGGTCAAAATTTTTCAGATCGGCGACTTCATTCCGTGGGGCGAGATAGCCAGTTGGATGCAGAATAGAACCAAACAACAGATATATTTTCGATGGACTTATAGTTTGGCGCCGTATCTAACTAAAGGCAGATTTAGCAAATCCGAGGATAATATTTTGAAATACGCAGTAACTAAGTACGGTACAAATTTCCGTAAAATATCAGCCGCACTGATGCCCAACAGGTCGACGGTCCAGCTACACGACCGCTATCATACACTGACTACCAGTCAACTCAAAAATTGGAACATCTGGTCGCTAGAAGAAGATTTGATGCTGTTGCAACTGTACGAACATTTCGGTCCGAATTGGTCTAGAATAGCTGAAGCGTTTACATGCAAAACTAGAACGAAGTTGAGACACCGGCATACCGCTTTGCAAAGGTATATTAGCAAAGGTATATCCATTCATGATTTGCACACGAATTGCTCAAAGCATAGGAACATCGAAGTAAAACAGGAGATGGGAATCGAAGAATCTAATCAATCTAATCGATACTTTAATAAGGACAAGGTGAACAACCTTGTACAAACAAACTGTAACGAAGACATTGATGAGGAATTGATCAAGTATTTCTACGTAGAAGGAAGAATAGAAAAATCGTGTGGTCACAGACAACAGCCTTATATGTCCGATGAACTCGAGTGCGATGTGAACAAATTATATAATATTCTGCGGCAATTAAATGCTCAACTTTCTATTCCCGACGATGGATATAACAATCCAATGTTAAACGGCAGGCAGAGACAGCTTCTATTCTCGTTAAAGGAATATATAGATATGAAAAACGATAAGGACAGACAACGTATGGTATTAGACGAGTATAGCTCGCTTATGTTTGGTATAAATCACAGCAACATTGCAGAAATTCTAAATACAACAAAACACATTGACTGTCGTGTAAATCCACGGAGTACCTTTCTAGACAAGAATGCGATAGTCTTGGACACTCCAGACATTGTGGTTTCTCACATCGGTGGCAACGAGCAAGAATTAGAATTCGAGAAGCTCGCTCGTTTGCTTGTGCGGAGTTCAGAAGATAGACAATTAGTGCGAACCACTAAAGGTATTTTGGATCGGAACTACTCTGCTACCAACAGCAGGGACAACGACAATAGAAGCAGCTTGAACTGTAACGTTGTGTCAACAAGAAAAATGTCGACTGTTCATTCAAAAGATTCAAGAAACGACGGCAATGTGCAAACCAACGTTCGTGGTCGCATAAATCGTTCAACGTCGTGTTCGCAAAGCGAAAATATGACGAGTAATTTAAATACATTGTTTAACGCGTTCGAAACGACACGCGAGTTTCCAGCTACCGTGGAAATACCGAAAGATCCATACGTACCCGCGATTGAACCGACACATTCGACTTTATTAAGTTTTAAGCGTTTACTCGGTTTAAAACAGAGTTTCAACAAAGAACAAAATATTCCACCGAAATGTCCCACGATGTCGAAGACTTGTCAACGACCGTTGAGTTTATTGGAAACGCGTTTAGAACAATTATTTAAATACCCGATCGGTCTGTCGAAGACTACGTTACCCGAAGTTTATGTTATGGATACTTTCTCGTATGATAACGTTAAATCGCAAAAGAAAGCTTCCAATCCACCGACAATACCAAAATCACATAAAACGAGAAAGCTTCAAAAATTCAACAAGACTAGTAAAGGTGATAACTAG
- Protein Sequence
- MDEPTDDDDLEQLLSLEIESPKRKSKHDFACIFPVEKSVTAGKSQVFPKESTFQKKPEHQRENMISECSIEDCDKLLSYNKQIISVLLDLKKHITYALEKCETKLSVIESGLEKHGAGDTRALICNAGIPYFKDRNHFFAPNNDDELLKENNKELQLRNLPKVASWTIKERKTLLKAIQEETIIASNKSKFVDLDESTYDSMCESSCESTWKPDKSTKGKNRIATDDHDKQIVQMQDKDFDWFNISSDYFDYAHSPLDCRVMWNVFLHPRINKSSWTKSEDVKLKEITKKYKFQNWDRIAEELDTDRSAYQCFIRYNTIRKLSKDKNFIWKPEEDKKLLKLVKIFQIGDFIPWGEIASWMQNRTKQQIYFRWTYSLAPYLTKGRFSKSEDNILKYAVTKYGTNFRKISAALMPNRSTVQLHDRYHTLTTSQLKNWNIWSLEEDLMLLQLYEHFGPNWSRIAEAFTCKTRTKLRHRHTALQRYISKGISIHDLHTNCSKHRNIEVKQEMGIEESNQSNRYFNKDKVNNLVQTNCNEDIDEELIKYFYVEGRIEKSCGHRQQPYMSDELECDVNKLYNILRQLNAQLSIPDDGYNNPMLNGRQRQLLFSLKEYIDMKNDKDRQRMVLDEYSSLMFGINHSNIAEILNTTKHIDCRVNPRSTFLDKNAIVLDTPDIVVSHIGGNEQELEFEKLARLLVRSSEDRQLVRTTKGILDRNYSATNSRDNDNRSSLNCNVVSTRKMSTVHSKDSRNDGNVQTNVRGRINRSTSCSQSENMTSNLNTLFNAFETTREFPATVEIPKDPYVPAIEPTHSTLLSFKRLLGLKQSFNKEQNIPPKCPTMSKTCQRPLSLLETRLEQLFKYPIGLSKTTLPEVYVMDTFSYDNVKSQKKASNPPTIPKSHKTRKLQKFNKTSKGDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00864563;
- 90% Identity
- -
- 80% Identity
- -