Lmar017982.3
Basic Information
- Insect
- Lasioglossum marginatum
- Gene Symbol
- ct
- Assembly
- GCA_028455795.1
- Location
- CM052276.1:6873357-6894479[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-27 5.7e-24 84.1 0.0 2 72 467 538 466 543 0.95 2 3 2e-32 1e-28 99.3 0.0 2 77 876 952 875 954 0.96 3 3 1.1e-30 5.7e-27 93.7 0.0 3 75 1108 1181 1106 1185 0.95
Sequence Information
- Coding Sequence
- ATGGTAGGAGGACGAGCGGAAAAAGAAGACCGGATCAGCCAGCTGGTCGAGGAAGTGTCCAGGTTACAGCAAAGCCTGCAACGTCTTCAAGAGACCAGCGCACAGGCGACGGCGCGGCTCGAGGAGGAGCTCGAGGCGCGCAGACAACACATCAGCAGACTGGAGAGCAAACTCGAACGACAGAGGGACTATGACGACCTGAAACGGGAGATCAACGCGCTCAGATCGGTCGATCTCTCGCAGATCCCGACCGGCGAGCCGGGCAAGAGCCTCGAGCACCTCCTAATGGAGCGCTCGAAGGCGCTTCAGCAAACAGAGAGCTTGAAACCGTCATCCAACACCCCGGACGCACTCGGTGGACTATCGTCACCCCTGCAGCGCGCCTCCACCGCCTCGCCCCACGGGGTCGGGGGTGTTCCGCCTTCGTCCCACGTGCCCTCCCAGCAACCACCACCGCCGCCCCCAGCAGCAGTCTCCCTCCCGCCGCGGTCCACTCCTACACCTTCTTCAGCGACCTCGACAACGTCCAGCCTCCTGTTCCCACCCCCTCTCCAGAACGTCGAGACCTTCGGCTCCTTCCTTGGCGAGGAGATCGTCGCCAACTggaggcggacgttggagaggtccatcatgaatcaacagcagcagcagcagcaacaacaacagcaacagcagcagcagcaccaacaacagcagcagcagcaacagcagcagcaacatcagcagcaacatcagcagacacagccgcaacaacagcaaacgacgcctttgaaccaactggtgcagcaacaacaacaactgcaacaagctcagccgttgatcggccttcatccgccaacgagtaccagcagcatgaaccatcttcCATCGCCCACAGATCCATCGTCCAGCTCCAACACGCCGGCCAAATCAAACACCCCGCTAGGAACCACTCCACTGAGTTGCCTTGACGCGGCCGAGAAGGCGCCCACGCCAGTCTCCGGCCACGAAACGCCCGCACCGCCCACGCCGTCGTCCACCACCGCGTTAACATCACCCCCGAGCTTTCAACCACCCACCACGATCATCGAGACCGCCTCCTCGGCCTCCGTCAACGGCGGCAGCGCGATCCCCGCCGTCCCCACAGCACCGCCGCCGAAAAGCCCGGCCGATCAAGAGTCCTGTCACAACAACAACAACAGCCATCATCTGGCGAACAACAACATCGGCGGACTGAGCGTGCTGGATACCCTGAAGAGCCCGTTTCGCTTCGACGATAGGACGCATCCATTCCGATTCGGCGACGAGTTCGGCGCTGCTGGTATGGCCGGTCGTTTAGGCGAATCGTTGATACCGAAGGGCGACCCGATGGAGGCGAGGCTGCAGGAGATGCTCAGATACAACATGGACAAGTACGCATCGCAGAACCTCGACACATTACACATAGCCAGGAGGGTCCGCGAGCTGCTGTCAATACACAACATCGGTCAAAGGCTGTTTGCTAAGTACGTCCTCGGACTTAGCCAGGGAACGGTCAGCGAGCTGCTGAGCAAACCGAAACCCTGGGACAAACTGACAGAAAAAGGCCGCGACAGCTACAGGAAGATGCACGGCTGGGCTTGCGACGAGAACGCTGTTATGCTGTTGAAATCCCTGATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCGTTCGCGCGCGGACCACAGGATGGTGGTCCGCCGGAAATGAGTGACGAAAGGTTGGCGCATATCCTCTCGGAGTCTGGCCACCTACAGATGAGGGGCGAGCATGAGGTGTCGAACGACGCCGACAGCAAAAGTCCGAGTAGGATCGGCTGTCCGAGCCCGTTCAATAAAGACAGGCTCGATAGCCAGAACAGGAGACTGAAGAAATACGAGAACGATGACATTCCGCAGGAAAAGGTAGTCAGGATCTACCAGGAGGAGCTGGCCAAGATAATGGGCAGAAGGGTGGACGACCTCCGTGGGCCCCGAGAGTTCTCTTCCAGCGCGATGTTTCCGCATTTTTTCAGTGGTGGCCAGGGTGGTCTTCAAGGGATGGAGCGCACGCAGGAAGACATCCGGCTGGCATTGGATGCGTATCATCGCGAGCTGCAGAAGCTGAATCCAACGCCAGGTCAGAACCCGTCACTGACCGGGTTGCCGGGACTTCCTGGACTGCCAGGACTCCTGGCGCTTCAGCAACAAGCTCTTCAGCAACACCACCTGGCGACGAACGGAGGCGGAGTCCAGGATTTGAGCCTGGGCAAGATCGATCCTAGAAATAAGATGATCAACGGCATCTCCGAGGAGGAGAAAGAGAAGGTGGAGGAAGCTATGAGACACGCGGGCAGCGCGTTCTCGTTGGTCAGGCCTAAACAGGAGACCACCGCGCCGCAATCCACCCCGAGCGGATCCAGTGCAAGCTCTCCGCTCGGTAATTCCATTCTTCCACCCGCGATGACTCCTAGCGAGGAATTCTCTGGGGCGGCGGCAGCCAGTCCTTTGCAGAGGATGGCCTCTATCACGAATAGTCTGATCAGTCAACCGTCCACGCCTACCCATCACTCAGCCAACCAGAGGCCGCTGAAAGCTGTACTGCCACCCATCACTCAGCAACAGTTCGACATGTATAATAACCTGAACACCGAGGACATCGTCAAGAGAGTGAAGGAACAACTGTCCCAGTATTCGATTTCCCAGCGTCTGTTCGGCGAGTCCGTGCTGGGCCTGTCGCAGGGATCCGTCTCCGATCTGCTAGCACGGCCGAAGCCCTGGCACATGCTCACGCAGAAAGGTCGCGAGCCGTTCATCCGGATGAAGATGTTCCTCGAGGATGACAACGCCGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCCCCGGAGAAACTGATGAGGACCGGCGGCTACGGTGGCCTGCCTCGTAAGTTTAACTCAGCTTGTGGGACCCCGATGAAGCCTATGCCTCCCACGAAGTTGGTCCAGGAACAGCTTCAGAATGCGGCGAAGGCGCAAGCGGCGGCACAAGCTGCAGCTCAGGCGGCGGCGCAACACCAGCAGGAAAGCCAGATGCAGTTGGGACCTCCTCAACAGAGTCCTCAGCATCCTCAGCATCCTCAGCCACCGCCTCCGATGATGCTAACACCTCCGGGTCCTCACCATCCTCACTCGCAGCTGAGCATGCAGGAGCTGCAGAAAAAACAGCAGCAGCAACAACAACAACAGATGAATCTCCACTCGCCGCATCATCAAATGACCCCGTCGCCACTTCGGGGCCTTCACCCGCACATTTCGCCGAGCGTATACGAGATGGCAGCGTTGACGCAGGACCTGGACACGCAAACGATCACGACGAAGATCAAAGAGGCGTTGCTAGCGAATAACATCGGCCAGAAGATCTTCGGTGAGGCTGTTCTCGGTCTTTCGCAAGGATCGGTCAGCGAGTTGTTGAGCAAACCAAAGCCCTGGCACATGCTCAGTATAAAGGGTCGAGAACCGTTCATCAGGATGCAGCTGTGGCTGTCGGACGCGCACAACGTCGACCGGCTACAGGCGTTGAAGAACGAGCGGAGAGAAGCAAACAAAAGACGGCGAAGCAGCGGTCCAGGTCATGACAACAGCTCGGACACGTCTAGTAACGACACGGCCGAGTTTTACCACGCTGCCTCGCCTGGTCCTGGTCCAGCCTCGGCTAAGAAGCAACGAGTCCTCTTCTCGGAGGAGCAGAAGGAGGCCCTGAGGCTCGCGTTTGCTCTGGATCCGTACCCCAACGTGGCCACCATCGAGTTTCTAGCCAGTGAGCTGGCGCTGTCCTCGAGGACGATAACCAACTGGTTTCACAATCACCGGATGAGACTGAAACAGCAGACGCCGCACGGCCAGCCGGAGCCACAGTCTCCTAGAGAACCCGGCCAGCCGTTCGATCCCGTTCAGTTCAGACTGCTGTTGAACCAAAGACTACTGGAGATCCAGAAGGAGAGACTGGGCCTGGGCAATGTGCCTCTTCCCTATTCCCCGTACTTCAACCCTAACCTGGCCGCCCTCGTTGGGAACGCGTTAAAGGAACAGTGCTCCGGTCTGGACCTGTCGATGAACGCGCTCAAGAGGGAGCCAAACCAGGAGTTCGAGGACGAGGACGTCGAGGACGCCATGAGCAACCTCGGCAGCGAAGACTCCGAGGGCTCGGCCGGTAGTATAAAGAGAGAGCCGACGGAGACACCTTCCGCGCCTACCACCGTCAGATCGAATAGAAGAAAACCTGCCGCACCGCAATGGGTGAATCCTGAATGGCAGGAACCGCCCAGGACGGGGGACGAGGTGATTATCAACGGTGTCTGCGTGATGCAGACGGACGACTACGGGGTCAAGAGGGAAGCCGAGGAGACGATCAGGGTTGAGCCGACGCCGGTTCAAGACAGATACGAGGAGGATGCGCAGAGTGACGTCTCCTCCGTATCTGGGAACAACGGCCAGGACAGGGACAGCCCTCTGCCTAGTCCGAAGTCTGGACAGAACAGCCCGGCGACGTCGCCCAGACCACCCTCCACACAGCAAACGCAACAGTCCACGGAGGAGAGTCCCAAGGACAACGTGGTGAAACACGAGCCGGAAGAGACGTGGGACTATTAA
- Protein Sequence
- MVGGRAEKEDRISQLVEEVSRLQQSLQRLQETSAQATARLEEELEARRQHISRLESKLERQRDYDDLKREINALRSVDLSQIPTGEPGKSLEHLLMERSKALQQTESLKPSSNTPDALGGLSSPLQRASTASPHGVGGVPPSSHVPSQQPPPPPPAAVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMNQQQQQQQQQQQQQQQHQQQQQQQQQQQHQQQHQQTQPQQQQTTPLNQLVQQQQQLQQAQPLIGLHPPTSTSSMNHLPSPTDPSSSSNTPAKSNTPLGTTPLSCLDAAEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTTIIETASSASVNGGSAIPAVPTAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDGGPPEMSDERLAHILSESGHLQMRGEHEVSNDADSKSPSRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKIMGRRVDDLRGPREFSSSAMFPHFFSGGQGGLQGMERTQEDIRLALDAYHRELQKLNPTPGQNPSLTGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLGKIDPRNKMINGISEEEKEKVEEAMRHAGSAFSLVRPKQETTAPQSTPSGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQESQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHSQLSMQELQKKQQQQQQQQMNLHSPHHQMTPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPTETPSAPTTVRSNRRKPAAPQWVNPEWQEPPRTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGQDRDSPLPSPKSGQNSPATSPRPPSTQQTQQSTEESPKDNVVKHEPEETWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394913;
- 90% Identity
- iTF_00982081;
- 80% Identity
- iTF_00863843;