Lmal004645.1
Basic Information
- Insect
- Lasioglossum malachurum
- Gene Symbol
- CDC5L
- Assembly
- GCA_028455605.1
- Location
- CM052317.1:8384156-8388266[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-16 1.1e-13 51.1 1.5 2 46 9 54 8 54 0.97 2 2 4.2e-12 3.9e-09 36.5 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- atgccgcgtattatgataaaaggcggtgtttggcggaacaccgaggatgaaatcctgaaagccgctgtgatgaaatatggcaagaaccaatggagtcgaatagcatcgctgttacacagaaaatctgccaaacaatgtaaagcacgatggttcgagtggttggatccaagtatcaagaagactgaatggagtagagaagaagacgagaagttgttacatcttgctaaattgatgccgacacaatggagaaccattgctccgattatcggacgtactgcggctcaatgtttggagcgttatgaatatttaCTCgatcaagcacagaagaaagaagaaggagatgatgcagcagatgaccctcgcaagctcaaaccgggagaaatcgatccgaatccagaaacaaaaccagccagacccgatcctaaagacatggacgaagatgaattggagatgctgtccgaggcacgtgccaggctggcgaatactcagggcaaaaaggcgaagcgtaaagccagggagaagcagctggaagaagcccgcagaatgcgacagcaacatttagatggggagctgaggcaagagaaggaagagatggaacgtagaaaagacaagcagaaattaaaacagcgcaaggagaacgatatcccgatgggaatgcttaacaacgaagagccgctgaagaaaagaagtaaactggttctgccggagccacagatatctgaccaagaattacaacaagttgttaagcttggaagagcgtcggaggttgcccgtgaagttgcaactgaaagtggaatcacattttcggacagtttactggccgattattctttgccaacgaacgcggctgtaactcctcgtactccagctgctacagatagaatccttcaagaagcccagaacgttatggctcttactcacgtcgatactccgctgataggcgggctaaacactcccttaaccaattccgacttcgccggagttgtacctaccacaaatgctgtggcgactccgaacacaattttggctacacctttccgttcgcaatgcagcgacggaactccggcgaattcgttcaacacaccggcgtccgtacgaacgcaaaacggagttttggctgccacgcctgtccgcgacaagctcagcatcaatccggacgaaaatttggacggatccgagactccgttgattcagaaacaagccaaagataaattgcgctcgaaactcagctctcttccaacgccgcgcgatgattacgagatagtagtccccgaagaggaaacgagagatgaaaatgcatccgcgcctgcaacggacatcgttgaggatcaagccgacatagatgccaggcaacagcaagaattaatggagcaGAGGAAGAGGGAATTGTCGCGTAGATCGCAAGTCATACAGCGAGACTTGCCACGGCCGATCGACGTGAACATGAACATTCTGAGGCCGTTTATGGACACTTCGTTGACAGACCTACAAAGAgcagaggaactaatcaaaagagaaatgataacgatgatgcaatacgattcactgcagaatccattgcaacagagtcgtaaaggtgcttcgagttctgtagcccaagcttatttagaacaacatccgtacattaattttgaagaagaagaGCTTACTTCCgcgaagaaactcctgattgatgagatgtcggtcgtgaaggaaggtatggcgcacggagagctcagtttggattcctacacgaccgtgtgggaggagtgcttgtcccagatactgtatcttgaaactcagaaacgttatacgcgagcaaccctggcctcgaagaaagaccgagtggaagcatgcgagagaaaattagaagaaaatcggatgcacatgactggggaagccaagcgagctgccagaatggaaaagaaattgaaagttctaaccggagggtatcagactagagcacaagtattaacgaaacagctgcacgacttgtgggagcaaatagagcaggcgcatttagaactttcgacgtttaaattcttgcaaactcaggaagaagcggcggtgccaagacgagtgaacgcgcttatggaagatgttaatagacaaacagagcgagaacgtgtgctgcaagtgcgatacgcgcaattacaagatcagttgcaataa
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGDDAADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRMRQQHLDGELRQEKEEMERRKDKQKLKQRKENDIPMGMLNNEEPLKKRSKLVLPEPQISDQELQQVVKLGRASEVAREVATESGITFSDSLLADYSLPTNAAVTPRTPAATDRILQEAQNVMALTHVDTPLIGGLNTPLTNSDFAGVVPTTNAVATPNTILATPFRSQCSDGTPANSFNTPASVRTQNGVLAATPVRDKLSINPDENLDGSETPLIQKQAKDKLRSKLSSLPTPRDDYEIVVPEEETRDENASAPATDIVEDQADIDARQQQELMEQRKRELSRRSQVIQRDLPRPIDVNMNILRPFMDTSLTDLQRAEELIKREMITMMQYDSLQNPLQQSRKGASSSVAQAYLEQHPYINFEEEELTSAKKLLIDEMSVVKEGMAHGELSLDSYTTVWEECLSQILYLETQKRYTRATLASKKDRVEACERKLEENRMHMTGEAKRAARMEKKLKVLTGGYQTRAQVLTKQLHDLWEQIEQAHLELSTFKFLQTQEEAAVPRRVNALMEDVNRQTERERVLQVRYAQLQDQLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00860313;
- 90% Identity
- -
- 80% Identity
- -