Lmal004340.1
Basic Information
- Insect
- Lasioglossum malachurum
- Gene Symbol
- SNAPC4
- Assembly
- GCA_028455605.1
- Location
- CM052317.1:4863742-4866492[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.059 54 4.1 0.1 3 18 165 180 164 181 0.93 2 5 4.6e-12 4.2e-09 36.4 0.9 1 45 277 323 277 324 0.96 3 5 6.7e-08 6.2e-05 23.1 0.4 4 42 332 374 331 376 0.97 4 5 1.1e-13 9.9e-11 41.6 0.0 1 45 384 429 384 430 0.96 5 5 8.3e-11 7.6e-08 32.4 0.1 3 42 439 478 438 481 0.95
Sequence Information
- Coding Sequence
- ATGGATGAGCCAACGGATGACGATGATTTAGAGAAAATCCTATCGTTAGAAATCGATTCTCCTGGACGGGAAAGCGAGCACGATTTTCCGTGTATTTCTTCGGTGGAAAAACCAGTGAAGGCCGGTAAGTCGCAAATGTTTCCGAAAGAGTCAACGTTTCAAAAGAAACCGGAATATCAAAGGGAAAATACGATTTCGGAATGTAACATCGAGGATTGCGACAAATTATTGAGTTTCAACAAGCAGATCATATCTTTTCTGCTCGATTTAAAGAAACACATAACCTACGCTCTCGAGAAATGTGAAACGAAATTGTCAGTTATAGAGTCCGGCCTTGAGAAACATGCGACCGGAGACAATAGAGCTTTAATTTGCAATGCTGGTATGCCATATTTCAAGGACAGGAATCATTTTTTCGCTCCTAACAACGAGGACGAACTGTTGAAAGAGAATTCTAAGGAATTGCAACTCAGGAATCTTCCCAAAGTAGCTCCTTGGACGGTCAAAGAAAGGAACACACTGCTTAAAGCAATACAGGAAGAAACCGTCGCAGCTTCTATCAAGAGTAAGTTTAACGATCTCGACGAGTCAACGTGCGAATCAACAAGCAAGTCAACATGCGAGTCAACGTATGAGTCTTCACGGAAACCTGACAAAAGAACGAAACGCAGAAAGATAATAGCGACCGATGACCGTGACAATGAGGTGGTCCAGTTGCAAGACAAAGATTTTGACTGGTTCAATATATCGTCTGTTTATTTTGAGGATGTACACTCACCGCTGGATTGTCGAGTCATGTGGAACGTTTTCCTTCATCCTCGGATTAACAAGAACTCCTGGACAAAGTCGGAGGACGTGAAATTAAAAGAAGTTGCGAAGAGGTGCAAATATCAGAACTGGGACAGAATCGCAGAGGAGTTGAATACAAACCGTTCCGCTTACCAGTGTCTCATCAGATATAATACCATAAGGAAACTGCTGAAAAATCTTATATGGAAACCTGAAGAGGACGAGAAACTTTTAAAATTGATCAAGATGTTTCAGATCGGCGACTTTATTCCATGGGGCGAGGTAGCTGGTTGGATGGAGAATAGAACCAAACAACAGATGTACTTCCGATGGACTTATAGTTCGGCGCCGTATCTAATTAAAGGCAGATTTAGCAAATCCGAGGATAACATTTTGAAAGATGCAGTAGCTAAATATGGTACAAATTTTCGTAAAATATCAGCCGCACTGATACCCAACAGGTCGACGGTTCAGCTGCATGATCGCTATCAAACACTGACTCACAGTCAACTCGCAAATTGGAATGTCTGGTCGCTGGAAGAAGATTTACAGCTGATGAAGCTTTACGAACGTTTCGGTCCAAATTGGTCTAGAATAGCTGAAATGTTTACCTGCAAAACGAGAACGAAGTTGAGACACCGGTACGCTGCTTTACAAAGGTATATTAGCAAAGGTGTATCCATTAACGATTTGCACACGGATAAGAACAGCGAAGTAAAACAGGAGACAGGAATCGAAGAGTCCAATCAATCTAATCGATTGCATTGCCTTAATAAGGGCATGGCGAACAAGGACTGTAGCGAAGACATTGATAAAGAATTGATCAAGTATTTCCATGTAGAAGAAAAGATAAAAAAATCGTTTGGTCACAGAGAACAGCCGTACATGTCCGATGAACTCGAGTGCGATGTGAACAAATTATATAATATTCTACGACAATTAAATGCTCAACTTTCTATTCCCGACGATGCAATTAACAATTCGATGTTAAACGGCAGGCAGAGACAGCTTCTATTCTCATTGAAGGAATACACAGATATGAAATACAACAAGGACAGACAACGCATGGTGTTAGACGAGTATAGCTCGCTTATGTTTGGTGTAAATCGCAGCTACGTTGCGGAAGTTCCAAGTACAACAAAATCCATAGACTGTCGTGTAAATACACGGAGTACCCTTCTAGACGAGAATGCGATAGACTTCGACACTCCAGACATTGTGGTTTCTCACATCGGTGGCAACGAGCAGGAATTAGAATTCGAGAAACTCGCTCGTTTGCTTGTGCAGAGTCGTAGTTCAGAAGATAGACGATTAGTGCGAACCACTAAAGGTATTTTGGATCGGAACTACTCTGCTACCAACAGCAGGGACAACGACAATAGAAGCAGCTTGAACTGTAACGTTGTGTCAACGAGAAATATGTCGAACGTTCATGCAAAAGATTCAAGAAACGACGGCAATGTTTTGCTCGTGCAAACCAATGTTCGTGGTCGTATAAATCGTTCAACGTCGTGTTCGCAAAGCGAAAATACGACGAGTAATTTAAATACATTGTTTAACGCGTTCGAAACGACACGCGAGTTTTCAGCCACCGTGGAAATACCGAAAGATCCTCCGTACGTACCCGCGATCGAATCGACACACTCGACTTTATTCAGTTTTAAGCGTCTCCTCGGTTTGAAACAGAGATTTAACAAAGAACAGAATATTCCACCGAAAGCTCTCACGATGTCGAAGACTTGTCAACGATCGTTGAGTTTATTGGAAACGCGTTTAGAACAATTATTTAAATACCCGATCGGTCTGTCGAGGAATTCGTTACCCGAAGTTTATATTATAGATACTTTCTCGTACGACGACATTACATCGCAGAGGAAAGCTACCGACCCACCGACAATACCAAAACCATGTAAAACGAGAAGGCTTCAAAAATTCGACAAGACTAGTAATGGTAATAACTAG
- Protein Sequence
- MDEPTDDDDLEKILSLEIDSPGRESEHDFPCISSVEKPVKAGKSQMFPKESTFQKKPEYQRENTISECNIEDCDKLLSFNKQIISFLLDLKKHITYALEKCETKLSVIESGLEKHATGDNRALICNAGMPYFKDRNHFFAPNNEDELLKENSKELQLRNLPKVAPWTVKERNTLLKAIQEETVAASIKSKFNDLDESTCESTSKSTCESTYESSRKPDKRTKRRKIIATDDRDNEVVQLQDKDFDWFNISSVYFEDVHSPLDCRVMWNVFLHPRINKNSWTKSEDVKLKEVAKRCKYQNWDRIAEELNTNRSAYQCLIRYNTIRKLLKNLIWKPEEDEKLLKLIKMFQIGDFIPWGEVAGWMENRTKQQMYFRWTYSSAPYLIKGRFSKSEDNILKDAVAKYGTNFRKISAALIPNRSTVQLHDRYQTLTHSQLANWNVWSLEEDLQLMKLYERFGPNWSRIAEMFTCKTRTKLRHRYAALQRYISKGVSINDLHTDKNSEVKQETGIEESNQSNRLHCLNKGMANKDCSEDIDKELIKYFHVEEKIKKSFGHREQPYMSDELECDVNKLYNILRQLNAQLSIPDDAINNSMLNGRQRQLLFSLKEYTDMKYNKDRQRMVLDEYSSLMFGVNRSYVAEVPSTTKSIDCRVNTRSTLLDENAIDFDTPDIVVSHIGGNEQELEFEKLARLLVQSRSSEDRRLVRTTKGILDRNYSATNSRDNDNRSSLNCNVVSTRNMSNVHAKDSRNDGNVLLVQTNVRGRINRSTSCSQSENTTSNLNTLFNAFETTREFSATVEIPKDPPYVPAIESTHSTLFSFKRLLGLKQRFNKEQNIPPKALTMSKTCQRSLSLLETRLEQLFKYPIGLSRNSLPEVYIIDTFSYDDITSQRKATDPPTIPKPCKTRRLQKFDKTSNGNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00864563;
- 90% Identity
- iTF_00860312;
- 80% Identity
- -