Lmal002408.1
Basic Information
- Insect
- Lasioglossum malachurum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_028455605.1
- Location
- CM052311.1:8297808-8311187[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-18 8.8e-15 54.2 0.1 1 45 560 605 560 605 0.96 2 2 1.9e-18 2.7e-15 55.8 0.0 1 43 1015 1058 1015 1060 0.94
Sequence Information
- Coding Sequence
- ATGGGCCGTAGGAGATGGAAGCAATATCAGGACACTCTGTACAGCGGTACTCGCAGCAGCGAATCAGTGACGGCACAGCCCCACCACCGGCTCTACCCGGCATTTTCGTCGTCCTGCGACCCGGTGCCCGGCAACTTGGAACAAATTGGGCCGCGCACGCTTCATCCCGcgtccacctcgctacccacaacgataacgacaacgacgagcacggtgtcggcggctacaaccaccaccaccagcaacaacaacagcaacagcaacgcggcggtaacaacggcgacgacggcgtcgacgacaagcttggtcaagcaggagagccTGCAGAGGCACCCCCTGCAAAACCATCACCACCACCAGGATCACCACCGTCATTATCACCAGTCGGAGGACCAGCGTCGTTTGAGGCCGgacgaggtcaaggtagagctcggggaggacgagttcccgaacggagtcgctcgcgaggaatcggtaaccaagggaacggagacatcgacgccgattacggttacgacggcaacgacgacgacggcaacgacgacgacgacgacgacagcaacgacgacgacggcggcgaccacgggaacgaccagcatcgccaccatcaccacaatcagcaccgcgaccggcacgataccgacgatcgcgtcgacgaacgcgacggcaaccatgaccaccggaaccaccacgattcccaccaggcgaagaagcaaacgccaaaagaacgacggagacggtgccaccgacgacagagaggacgacgaagaaaacgaggacgaggaggacgCAAGGTGTCAGAACGAAGCGGAGAAGAGGCTCAAGCTCGATCAGGATGCCGACAGGCCCGTCAGTCCTCTCAGAAGGGAAAAGGATCGAGCTGCGAGGGACTATCCGACTGCCAACACCACCGACACGGAAGGGACCAAGGAACGAACGGAGGAAGTCGCGTTGGTGCGGACACCGGTGACGCAGGGCTTGTTGAGAGTGAAGAAGGAGGAGGAGTTACAAGAAGCACCGAGTTCTGGAGGCGGCCCAACGATATTGACGACACCGGCTCCGGATTCGGATGGGACCAGGTCAGGGTTGTCGTGTCGGGAGGTTGACACGGCGGCTAGGAACGCGGTAGCGCCGTATCTGATCGGAGGCAGGCGCACCAGCCCACCACCCGAAGACTGGAAGCCGAACGACAAGTGTTACTTCTGCCTGGACGGCAAGCTGCCGCACGATGACCAACCGCCCCTCAGCCCGCAGAGCGACAGCAGCAGCAGCTCGCGATCGGCCGAGTCACCGATGTCGGTCCAGGTGGACCCGATGGCGGCTTCAGTGGTCGCGGCCCTTAGCGGCACCTACCCCACCTTGCTGCCCCAATGGTGTCTACCACCTAGGGAAGCGCCTCTGGTCGGGGTGCAAGCTCACCAGGACAGCGCGACGCCAGTCGATCAGCCGCTCGACCTCTCGGCCAAACCCAAAAATTCTCAGGACAACAACATATCCCTTTTGGAGCAACAGAAAATACCTCTAAGGATGCCGGCAGGTATCGACCCCAAGAGTATCTTTAATTCGTGTTACCGCGCGAAACCGCGGGTCGGGCCGGTGGCTGTGACGGCGGCACAAGCTGCGGCAGGCGTCGGTGGTGTCCCCGTGGTGGGTGCCGGGGGTGGCCGGAGGGCCTACACCGAGGAGGAGCTGCAGGCCGCCCTCAGGGACATCCAGAGCGGAAAGCTCGGCACGAGAAGGGCGGCGGTCATCTACGGAATACCGCGTAGCACCCTGCGCAACAAGGTCTACAAGCTTGCGATGGAGCGCGAAAGGGACGCGTCCCTGACTAGCACCCACTCACACCCTCACGAGCCCGGCGCCCCAGCCACCACCACCACCACCATCACCACCACCACCACAACTACTACTACTACTACAACAACACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACACGGCCGGTCGGTCTTGGCGAGGTTGCAAGACTCGAGGTGGACGACAAGGAACTGTCCGGGGCGGAAGAGGAGAAAGAAGTCGAGAAGGCGCTGCTGAAGCCGTTGTTGTCTTTCGAAGATCTTGTCAGGTTCTCCGCCCTCGAAGGTGGCGGCGGGGACTCTCTGAGGAGTCTGCTGCAGCGGGGACAGGAAACGGGAACGGAGTGGCCAGGCCTGGAACACGCGAACATCGGCCCGTACATTCAGAAGATGCTCGCGGCGGCTGCACCGTTCAAAGGCATGGAGACGCAGGACTACCGTATCCCGGAGGTGATGAGGCGGCTGATGAGCGAGGACAAGAGGCTAAACAAGAGCGTAAACGGGGACCAGTCGCAGCCGTGTCACCAGCAGTTTCATCACCAGCAGCAGTCGCACACGCAGCACTCGTCGCACTCGCAGGCCTCGGGCGGCACGGCGTCGCAGACGCAACAACAACAACAGCAACAGCAACGGGGCCCGATCACGAACGACGACTTCAACCCGAACATCGAGGAGGAGGCGAGCGACAGCGCCCAGGGCCGAGCGATTCTAAAGATTCCGTCCTACAAGCCCGCGAGCACGCCGGGCTGCTCGAGCAAGAACGGCGAGCCGACCTCCGCGGCGTTCGCGCAGGGATTCGCCACCGCTGCCTCCAGCCCGGGCCTCCTCGAGAGAGCGAGCCCGGCGTTCTCCGGCACCAGCAGCCCGACCAACTCGCTCGTGGGGAAGACGGTGGCCGTCAACTTCCGCGACGTGATCGCCAAGAGCATCAGCGTCAAGTTCCAGGAGACCCAGCAGGTGCCGGCGGCCGGCGGACTCACCGGCTGCCCGCCGAGCGGCGTCGTACAGTCCCAGCAGACGATCATGACGGACCCGAGTCCGTTCAAACGGGGCCGGTACACGCCGCCGCAGCCCCCCACGCAACAGTCCCAGTCGCAGCCCAAGCCCCAGCAGTCCCAGGACGCGAACAAACCGAAACCAGCCACCGGCGGCAAGGGAACCAGACCGAAGCGCGGCAAGTACCGAAACTACGACAGGGACAGCCTGGTCGAGGCCGTCAGGGCCGTGCAGCGCGGCGAAATGAGCGTGCATCGCGCGGGCAGCTACTACGGAGTGCCACACTCCACCCTCGAGTACAAAGTCAAGGAACGACACCTCATGAGGCCAAGGAAGAGGGACCAGAAGCAGACGGACGATAAGACGAAGGAGACGGCGGTGGCGACGGGAGCGGCCGCGAACATGCGGCCCGGCACCGCGGACAAGAAGCCGCAACTGAAACCGCAGAAGCCGTTCACGCCGCCGGCGGGTATCGCGGGACCGAACGGGCTGAAGATGCCGCCGTTCATGGAGGGCATGCCTCACTTGCCGTTCGGGCCGTTCAACTTTTGGAACCCGACGCCGTTCATGCCGTCGCCGTTCATGGCCGGGGCGCCGAACGTGCCGACGATCCTGCCGGAGCAGTACTTCGCGACcagcaggatgcgtgggctgcaggaacagcagaggagcgcggcgatggtgcaacagcagcagcaacaacaacaacagcagcaacagcatccgcagAGGGATAGGGACGGTATCGGCGCGTCGACGGCGACCACGGAGTCGTCGCCGGGAACCTCGAACTCCCGGGGCACGCCGATGTCGAAGGCGGCTCGCGAGGCCACCGAGGGTCTGTACGACGGCTCGGCTGCGAACGGCAGTTTCCTGGACAGCCTGATCAGGTCTAGCCTGGAGACGGGAATCCCGAGGGACCAGAGGGCGATCACCGAGACGAGGGGCAGTCAGCCCGCGTCGTCCTCGCAGCAACAGCTCCCGGAGACGATGAGGAGTAAAGCGTTGATCGACCAGTTGTGCCGAAACTCTAGGAGAACGCCGGTGCCTCGGCTGGCCCAGGACAGCAGCGAGGACGAGAGCTACAGGGGACCATCGGCGGCGGGAAGACCAGTACCGGAGAGGCCGGAACGCGTGCCCACCGTCGACCTGAGCCCGTCACCGTCGGACAGGTGTCGCGTCGACGACGCCAGCGACCGGCTCGCCTCACCGCCGACGCCTCTCTCGGTCTCAAGGGCCGGGAGCAGGGACGAGGACAGTGCTCGCGACTCGAGGGCCGATCGCAGCAGCAGGGAGCGCGAGGTCCACAACGGCGGACAGGAGGATCGCGATCGAAAGCCTCTGACGAGCGGCGGCGGCGGCGGCCAGCAACAGCAgtcgtcgtcgacgacgtcgcagcaatcgtcgcaacagcagccgtcgtcgcagtcgcagctgaATCACTACCCGGACTTGCTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCAGCAACAGCAGCAACAGCAACAGCAGCAACAACCTGCGCAACAGAAAGAGTTTGCTGCGGTGAGCGGACTGGTTGTGCAACTGCAGCGGGGCTACAACTCCGGGAGCAACAGATCCGGCGAGCAGACCAACAGCCAGCAGTCGGCCGAGCAACGCGGCCCCGTCATCGGTATGGAAGACAGCGTCGAGCAGTAG
- Protein Sequence
- MGRRRWKQYQDTLYSGTRSSESVTAQPHHRLYPAFSSSCDPVPGNLEQIGPRTLHPASTSLPTTITTTTSTVSAATTTTTSNNNSNSNAAVTTATTASTTSLVKQESLQRHPLQNHHHHQDHHRHYHQSEDQRRLRPDEVKVELGEDEFPNGVAREESVTKGTETSTPITVTTATTTTATTTTTTTATTTTAATTGTTSIATITTISTATGTIPTIASTNATATMTTGTTTIPTRRRSKRQKNDGDGATDDREDDEENEDEEDARCQNEAEKRLKLDQDADRPVSPLRREKDRAARDYPTANTTDTEGTKERTEEVALVRTPVTQGLLRVKKEEELQEAPSSGGGPTILTTPAPDSDGTRSGLSCREVDTAARNAVAPYLIGGRRTSPPPEDWKPNDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAALSGTYPTLLPQWCLPPREAPLVGVQAHQDSATPVDQPLDLSAKPKNSQDNNISLLEQQKIPLRMPAGIDPKSIFNSCYRAKPRVGPVAVTAAQAAAGVGGVPVVGAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTPPNTTQNASATTPPPQVDEFNTRPVGLGEVARLEVDDKELSGAEEEKEVEKALLKPLLSFEDLVRFSALEGGGGDSLRSLLQRGQETGTEWPGLEHANIGPYIQKMLAAAAPFKGMETQDYRIPEVMRRLMSEDKRLNKSVNGDQSQPCHQQFHHQQQSHTQHSSHSQASGGTASQTQQQQQQQQRGPITNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFATAASSPGLLERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQETQQVPAAGGLTGCPPSGVVQSQQTIMTDPSPFKRGRYTPPQPPTQQSQSQPKPQQSQDANKPKPATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQTDDKTKETAVATGAAANMRPGTADKKPQLKPQKPFTPPAGIAGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMAGAPNVPTILPEQYFATSRMRGLQEQQRSAAMVQQQQQQQQQQQQHPQRDRDGIGASTATTESSPGTSNSRGTPMSKAAREATEGLYDGSAANGSFLDSLIRSSLETGIPRDQRAITETRGSQPASSSQQQLPETMRSKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSAAGRPVPERPERVPTVDLSPSPSDRCRVDDASDRLASPPTPLSVSRAGSRDEDSARDSRADRSSREREVHNGGQEDRDRKPLTSGGGGGQQQQSSSTTSQQSSQQQPSSQSQLNHYPDLLYAVSTDKKSACDSKLIVDHSSQKTQQQQQQQQQQQQPAQQKEFAAVSGLVVQLQRGYNSGSNRSGEQTNSQQSAEQRGPVIGMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00865231;
- 90% Identity
- iTF_00762467;
- 80% Identity
- -