Basic Information

Insect: Lasioglossum leucozonium
Gene Symbol: -
Assembly: GCA_028454225.1
Location: CM052212.1:3790050-3796888[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.11 7.5 7.2 0.5 1 23 899 921 899 921 0.97

2 11 0.0013 0.093 13.2 0.1 2 23 1015 1036 1014 1036 0.95

3 11 0.072 5.1 7.8 0.1 3 23 1223 1243 1221 1243 0.96

4 11 6.4 4.6e+02 1.6 0.3 1 10 1254 1263 1254 1265 0.90

5 11 0.00015 0.011 16.2 0.9 1 21 1327 1347 1327 1348 0.94

6 11 0.18 13 6.5 1.4 2 23 1375 1397 1374 1397 0.94

7 11 1 73 4.1 0.1 1 23 1446 1468 1446 1468 0.94

8 11 0.7 50 4.7 0.8 1 23 1488 1510 1488 1510 0.93

9 11 0.0087 0.62 10.7 4.2 1 23 1790 1812 1790 1812 0.98

10 11 0.047 3.3 8.4 0.1 2 23 2198 2222 2197 2222 0.94

11 11 0.073 5.2 7.8 0.4 1 23 2224 2246 2224 2246 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.11	7.5	7.2	0.5	1	23	899	921	899	921	0.97
2	11	0.0013	0.093	13.2	0.1	2	23	1015	1036	1014	1036	0.95
3	11	0.072	5.1	7.8	0.1	3	23	1223	1243	1221	1243	0.96
4	11	6.4	4.6e+02	1.6	0.3	1	10	1254	1263	1254	1265	0.90
5	11	0.00015	0.011	16.2	0.9	1	21	1327	1347	1327	1348	0.94
6	11	0.18	13	6.5	1.4	2	23	1375	1397	1374	1397	0.94
7	11	1	73	4.1	0.1	1	23	1446	1468	1446	1468	0.94
8	11	0.7	50	4.7	0.8	1	23	1488	1510	1488	1510	0.93
9	11	0.0087	0.62	10.7	4.2	1	23	1790	1812	1790	1812	0.98
10	11	0.047	3.3	8.4	0.1	2	23	2198	2222	2197	2222	0.94
11	11	0.073	5.2	7.8	0.4	1	23	2224	2246	2224	2246	0.96

Sequence Information

Coding Sequence: ATGGTGAATGCTAATAACAAAATGGACAGCACAGATTTTTCTACCACCAATTGTCCTTTGGAGACTACAATTGATACACCACCAATGTTACGCACACCTAGGAAAAATGGAGTTAGGCCATTCAAATATAAGTCGTATAACTTGAAAAAAAAACTTACATTTGTTAATGTCAATCATTTGCAAAATGAAAATAGCATGGTAGCTGACTTCTGCAAATTAGTGTGTAAACCAATGACTGTAAGACTTACACGATTACCAGATTCAGAGTTGAGAAGACTAACCACAAGAGTATTACCTAAAACTGTACCTATCAGAAGGACTCCAATAAAAAGACCGCTTTTTAGGTTTTATGGACGTGGAAAGAAAAAAAGAATTCTTACACAAATACAAAATAACAAAATTAATACAATTGTAGATAATAATGCTAATAACAATGTACATAAAAATGTTTTTAAAAATGTACCAGAAAAAAATGATAAGTATGTATATACCAGACATCAGTTACAAGTTAAATCAGCTTCCAAAGTACAAAAATCTAGCAACCATGAACAATGTAAAGAAGATTTATTAAAAACTGTTAAGCAACCAATTATAACATTATATAGAATAGACAAAGTATTTAATAAGTTAGCACAATCACTTGCAAAAGTAGCTACAAATAAGCAAAACCACACAGTAGAACAGCCGATAGTCGCACAAAATATAGCTGTAACTCAAACTGAGGATGTTGGCATAATGAGTACTAGTAAAAGTGATTGTTCTTGGAAAGGCCGAGTTGATGATAATGTTAGCGAAGCAGACAGCGATGACCTGTCCCAAGTCAGGTGGATATCTAGAAGAAAACGTAAACTTTTTAATGAATCCAGTGACGAGTCTGATACAGACCAATTGCATGAAGAAACATCGATACAAACGAACATGTTAAAATTGAGTTCACTGCAAAAGGAAACTGGGGATACTAGTGAAAAATGCAATGTATTACATAGAAACACTCCAGTAAAAATAAAGAGGTTAAAATTGAGTTTACCGCAAAGTGTAACTGCAAAGACTGCTGATAAACACACTGATGGAGAAGAAGTAAAGAATCCATTACATGGATATTCTAGCAAAGAAAGTATAGAAACAGGTATAGTAAATGACGAAGCGTTTGTTGAAAATGAACATGTAAATCTTGAAAATGAAAATGTAACTATTGAAAATAACAAAGTAGGTGTTCAGGAACCTCTGGTTCAGCAAAAAGAAGGAGATCTGGGCATTGAGAATATAGAAGTAGATAACAGGGAAGAAAGAATAAATGTTGAGTATACGAAAGAAGAAAACAAGGAAGAAAGAATAAATGTTGATAATATACGAGTAAAGAACAACAGGGAAGAAAGAATAAATGTTGATAATATACGAGTAAAGAACAGGGAAGAAAGAATAAATATTGAGAGTATGCAGGCAGTTGAGGCACTGCGAGAGATGAATGCTAAAATTGGAGATATAAATGTTGGAAATGCCAATGTAGATATTGAAAATGTTGATTTCAATGTTGAGGGTGTTGATGTAGATGTTGAGAATGAAGTTACGAATATTGAAAATATAGATGCGGATGTTCATCGTGAAGATGTGGATGTTGAAAGCGAAGAAATGCATGCTAAAAGTGACGAAATTGATATTGAGACTGCAAATACGTGGTGTAGCATGGATGCTTCGGAGAATGCAGTTCAAGTAAGTACTAAAAATAGTACGGGAGACGGTGCTTCCAGCTTGTTACCTACAGAAGTAAGCGTTGTACATAATTCGAGAGAATGTACAAATTCTAAACCTGTGGATGAATTAGTTCGTGAAGCTGCAGAAATACAACAGCATAGATGGAAACGATCTATATCTGAGAATGAGTTTACACAAAAATACAAATTGCGTAAACAAGTGAAAATCCTCTTGGTGGATTTGCAACATATCAAAAGTTCATTTGGTAATAAATATTCAGCTGCAGAGGTGGAAAAACTAACACAGAGAAATATAGATATGTCGCCGAATTGTAATTCTATATGTACGACCCAAAATCTTTTGATCTCAGGTGTAGCTCATTCCGAGAATATTGTTGGTAGATTGGAACCTAACGACAATATTGCAGAGTCAAATGTCTGTTCCACTGCGAGCGAAAGTAGTATCAAATCAACAGATTTGAACAAATCTCCATGTTCGGAAAACATAATAGGGAGAAAAGGAACTATAGAAAGAGAAAGACTTTCTAATACTGTATTAACAAAAGGAAAACTATACAAGATGACGTCCGACGGCGCCATTGGGTGTTCTGTATCTTCGCATCTTCCAGAACGATCTATCAAAGAATTAGGATTGTTCGGTGTAAAAGAAAGCACGACTAGGACCCGTTCGTCTTCTCCACGAAAGTCTGGTAAACTTTTAATTGTTTTTAAACCGAAAGGAAGTGCAGCAAACGCAAAAGCACCATCTGATACTTCCGATATTGTTACAGATAAGGATTTTTCGAATACTATTGAAAATCTTCATCTTGCAGGACACAGGAGTTTTACAACAAAAGATCAATCGAAAGACGTAAGTGTTAGAAATCAAAAGACGGTTGCAAAGAAGATTACGTTGATCTCTGTCCCCGCAACTTCTTCAACAAAGTATGAAAAACATACAGAGAAGAAAGATTCTAGCAAATCTAATGAATTTTACAGTAATTATAAATGCATTGTTTGCGACCTCTACTTCGAAGATTATTCCGTTTTGCAACAACATTTAAGTAAGCATGCAAAGCAACAGCTCCCTTCATTGTCACCAAAGTATACAGTTTCTGAAAAGCGTGGTAACATCGAAGATATATTACAATCTCCACCTTTGGTGCCGGAAGGACAAACACTACTACAGACTCCTATGGACACGACTACTTGCCAAGTTGCACCTCCATCTGATGGTATTGCAGACAATACTGTATTGTTGCACAAAAGATCACAGAAAAAGTTGAAACCAGTGAAACATAAAAATAGTTCGTCAAAGAAGAAAGTTCTTAAACCATGTAAACTCTCGGACGAGTGTAGCGTGTGTTCCCAGGAATTTTCAACGAGAGCAGATTTGGCAGCCCATATTTTCCTACACTCGGAGAGTGAACTGCAAAGAGCTTACGAAGCTGCAAAACTAAAAAGATACGAAGAAATCAGGCATGCAAAATCGGAAACCCAAAGAACGGAGGATACTGTGGCAAATGCCGCTGATTTGGTTGAAAAATCTTCAACGAATACAAACGAGTGTGAAATTAGTACAAAAGCACAGACTGCACAGAACCAAAATAAGCAAACATCGGAACCCACTGCGGTTAAGGTTCCTGAAGAAGTAAAGGAAACTGATCCTAAAACAAGCAAACCAACCTGTGGAGAAAGCAATTCTAATAATCATGTATCTTCTGTGATAAATAAGATAGAGAAAGCAAAAACCACTAAAAAAGGCGGGTCGTCTAAAACATTTCTTACGATATGCCAGTGTCACAATAAAGCAGACATGAACTTCAGCTACCTGCAGATTGAGATAGTTCTGCTGTGTCACACTTGCAAAGTATTGTTCCGAAGTATGGAATGTTTCGAGACTCATTATCGTCTTCCAGAGTATTCAGCTTGTAATCAGAACCGGCTGGAGAGCGGCCGATCTCCAAATTTATTCTGTGCTACTTGCGGGATGATATTTAGTTCGGATCAAGACGTGCGTCAGCATTTAGAGATGCATGTCCGTTTCAAGAAAAACTGCACTATGGACTTCCGTTGCAACATCTGCAAAGTGATGTTCATTGGTATCGGATCGATCTTTTACCTCCACTGGTTTAAACACACAAAGGATTCGTTCTGGGTAGCCAGTGAACAATCGTTTCCCAAAATGTCTTTATTCATCCCGAAATCCAAGAAGCAAGGAGAAACGTATAAACCAGGGGAATTTATTATGGAAAGATATCTGGATAATTACATTTATGTTGCAGAATATATTTGCTTCGACTGTAAAGTGGTTTTCACTAACAAAGACCATTTAAAGACACATCTACTGAATTGTAGAGCAGACACTTTAGCGAAAAATCAGATTGTAGAGTCCAATGGTACAGAAATAAGGCAATTAGAGTTGAAATTAATTTGTAGTCTCTGCGAATACCATACTTTCAGTAAAGTGGAGTTATACGCGCATATGAAGAACAAGCATAAATTCGCCTCGGAGCCTCAGTTTTTGTGCGTGCCTCTTAGAACAATGGCGACAACGTTTATTTGCAGAATTTGTATGGAAATAAATGAAGACATTGACAAGTTCAACGAGCACTGGTTGAGTCATTACGTGAAGCAACCATATTTCGTTTGTATCTATTGTAACAAAGATAGCGATAGCGTGGATGCTTTGAAAGAGCATGTCAAAGAACACGAATTGGCAATAAGACAGAACATAATATCTTGTAAGGTGAAGTATCGGGACGTTGAACACATCTGTAAAGTATGCCACGTTGGTGTTGAGTCCAAGAAATTGTTAAACGAGCACAATGCTATACACAATCTAAATGATTTGAATAGGAGAAAGAGCAATGAAGTCACGACTGAGAAGGATATACTTCAGAGAATGCTGGAAGCCGAGGAGCCTGATAAAGAGAATGAAGCAACAGTGAATCAGGCCGTGGGATGTTCGAAGTCTGTTACAGATCGCGACAAGGAGAAATTAATTAATATACTGGAAGGTAACGAGGAAGAGGATTCTGAAAACGAGTTGGTAATCGACTTAGGAGAGCATCCAGAGAACGAGTCGGCAGTCAAAGACAGATCTATAGAAAAGAACGTTCCACCTACATTACCAACACTTATGTTGCCAGCACCTACGTTGCCAGCACCTACGTTGTCAGCACCTACGTTACCAGCACCTACGTTCCCAGCACCTACGTTGTCAGCACCTACGTTGCCAGCACCTACGTTCCCAGCACCTATGTTGCCAGCACCTATATCGCCAGCATCTACGTTGCCAGCAGCTATGTTGCCAGGACCTACGCTACCAGCACCTATGTTGCCAGCATCTACATTGCCAGCACCTACGTTGACGGCATCTACGTTGGCGGCACCAACGTTGCCAGCACCTACGTTGACGGCATCTACGTTGGCGGCACCAACGTTGCCAGCACCTACGTGGCCAACCATCACGTTAAACGATGCTTTGGACTCGGAGACTCAAGCTGCTCCACAAAATGTTGTCCAGTCGGAAAACGTGATTGTTGTAGAGAATGAATCTCAGAAAGATGAAGAATCGATCAAAGAAGTAGAGGCAAGTGAGCCTACGAAAAAGAAGCACGGATTTCTGCGGGTGAAAGCTTTAACAGAGCTCTTGGAAGATACAAGCTCCTTGTTCATATGCCAGACATGCAATTATTCTTGCGATTCTGCTGAATCTTTGAGGCAGCATCATTTGACTCATATACCTCAAAAGCAACCGCAGCCTTTCCAACCAGAGATTCCAGTTTTTCAGGCACCTGTGAGCTCCATCGAACAGAGCAGACTTGTTAACAAGACGTTCCCTGAAAAGTCATTTGTAGCGACTGGTAGGACAGTTCAGATTCCATTCCTCTCGAGACTCTATCCAGGAACAGCGACCAACGCGAAAGTATTAGCCGCAAAACCGAATCCTGTAGTCTCTTCCGCGCAGGCTTCCACGAAAACGGCGTATCATAAAAATCTGCCGGCTTGTAATATTGTCCGTAAAATAATTGTATCGCGTAGCAGTCTCCAAACAAATGGAAACGTTCCCACAGCGACGAAAAGAAGTTCTTCCAATGCACAGACTACTCAAAAAGTGTCCACAGTCGATTTTAATAGTACGAACCAACGGGGAGCTGTAACTAGTGTGACAAATTCGAATAAAAATCCTAGCGGGAATTTGCCTTTGACGGCGAACATGGCTACCGTGGCCGACAATAGTTATACTAAATCCAAAATTTGTACGAAGCATCATCTAAGGAATTCGAGGGCACACGACTCACCAAAGTATCCCCAAACGCAACATATAAAAAACGGGTTAGCCGAGAAAAGTCACAACGTGGGTGGTGGTGTGGCAATGAGGAATAGCAATATTACAAATGGTAATCAGAATTATAATCAGATCCAGTGCAGCATTCAGAACCAGGCAAGGATTAATCCTTCTGCAACGGTGTACTACAAGTATCCGAATTCTGAGCATGTTTACGCTGAGATTGGTCAGGGGGCCATGCAAAATCAGCAAGCGATACGACAAGTGCCGAGTCACACGGTAACGACAAACCTGCCTCCTGCCTATTATTACAAGAACCCCGCGGCCGGTGGGATGTCGATAGTGATCAACCAAGCACCACCTACCGTCTCCAATCTATCTACGATGGACATAAGGCAGCAGCAAGGACACCAGACGCAAATCTATCAGCCGGTGTATACGAATCCAGTGATGTCGGTAGATTCTTATGCGCAACAACTGCCGCAGAACATTATTGATTATTCTGGAACCGGTGAAGTATATCAGGTGTCATCCAACGAGTACAGAGGACCGATCACTGAACATATCACCGCCTGCGGAAGGACACTTGAAGCCTCGGCAAATCTAATTTGCCCCTATTGCCCGAACTCCGTTACATTTACCAATCAGGACATGTTTAAATTACATATAAGCGTCAGCCATAATTTCATCTGCGATCTTTGCGGCTTGATGTTTCACAATATCGATGACATAAGAATCCATAAAATCAAACACGGGTTGATGGATAATTGA
Protein Sequence: MVNANNKMDSTDFSTTNCPLETTIDTPPMLRTPRKNGVRPFKYKSYNLKKKLTFVNVNHLQNENSMVADFCKLVCKPMTVRLTRLPDSELRRLTTRVLPKTVPIRRTPIKRPLFRFYGRGKKKRILTQIQNNKINTIVDNNANNNVHKNVFKNVPEKNDKYVYTRHQLQVKSASKVQKSSNHEQCKEDLLKTVKQPIITLYRIDKVFNKLAQSLAKVATNKQNHTVEQPIVAQNIAVTQTEDVGIMSTSKSDCSWKGRVDDNVSEADSDDLSQVRWISRRKRKLFNESSDESDTDQLHEETSIQTNMLKLSSLQKETGDTSEKCNVLHRNTPVKIKRLKLSLPQSVTAKTADKHTDGEEVKNPLHGYSSKESIETGIVNDEAFVENEHVNLENENVTIENNKVGVQEPLVQQKEGDLGIENIEVDNREERINVEYTKEENKEERINVDNIRVKNNREERINVDNIRVKNREERINIESMQAVEALREMNAKIGDINVGNANVDIENVDFNVEGVDVDVENEVTNIENIDADVHREDVDVESEEMHAKSDEIDIETANTWCSMDASENAVQVSTKNSTGDGASSLLPTEVSVVHNSRECTNSKPVDELVREAAEIQQHRWKRSISENEFTQKYKLRKQVKILLVDLQHIKSSFGNKYSAAEVEKLTQRNIDMSPNCNSICTTQNLLISGVAHSENIVGRLEPNDNIAESNVCSTASESSIKSTDLNKSPCSENIIGRKGTIERERLSNTVLTKGKLYKMTSDGAIGCSVSSHLPERSIKELGLFGVKESTTRTRSSSPRKSGKLLIVFKPKGSAANAKAPSDTSDIVTDKDFSNTIENLHLAGHRSFTTKDQSKDVSVRNQKTVAKKITLISVPATSSTKYEKHTEKKDSSKSNEFYSNYKCIVCDLYFEDYSVLQQHLSKHAKQQLPSLSPKYTVSEKRGNIEDILQSPPLVPEGQTLLQTPMDTTTCQVAPPSDGIADNTVLLHKRSQKKLKPVKHKNSSSKKKVLKPCKLSDECSVCSQEFSTRADLAAHIFLHSESELQRAYEAAKLKRYEEIRHAKSETQRTEDTVANAADLVEKSSTNTNECEISTKAQTAQNQNKQTSEPTAVKVPEEVKETDPKTSKPTCGESNSNNHVSSVINKIEKAKTTKKGGSSKTFLTICQCHNKADMNFSYLQIEIVLLCHTCKVLFRSMECFETHYRLPEYSACNQNRLESGRSPNLFCATCGMIFSSDQDVRQHLEMHVRFKKNCTMDFRCNICKVMFIGIGSIFYLHWFKHTKDSFWVASEQSFPKMSLFIPKSKKQGETYKPGEFIMERYLDNYIYVAEYICFDCKVVFTNKDHLKTHLLNCRADTLAKNQIVESNGTEIRQLELKLICSLCEYHTFSKVELYAHMKNKHKFASEPQFLCVPLRTMATTFICRICMEINEDIDKFNEHWLSHYVKQPYFVCIYCNKDSDSVDALKEHVKEHELAIRQNIISCKVKYRDVEHICKVCHVGVESKKLLNEHNAIHNLNDLNRRKSNEVTTEKDILQRMLEAEEPDKENEATVNQAVGCSKSVTDRDKEKLINILEGNEEEDSENELVIDLGEHPENESAVKDRSIEKNVPPTLPTLMLPAPTLPAPTLSAPTLPAPTFPAPTLSAPTLPAPTFPAPMLPAPISPASTLPAAMLPGPTLPAPMLPASTLPAPTLTASTLAAPTLPAPTLTASTLAAPTLPAPTWPTITLNDALDSETQAAPQNVVQSENVIVVENESQKDEESIKEVEASEPTKKKHGFLRVKALTELLEDTSSLFICQTCNYSCDSAESLRQHHLTHIPQKQPQPFQPEIPVFQAPVSSIEQSRLVNKTFPEKSFVATGRTVQIPFLSRLYPGTATNAKVLAAKPNPVVSSAQASTKTAYHKNLPACNIVRKIIVSRSSLQTNGNVPTATKRSSSNAQTTQKVSTVDFNSTNQRGAVTSVTNSNKNPSGNLPLTANMATVADNSYTKSKICTKHHLRNSRAHDSPKYPQTQHIKNGLAEKSHNVGGGVAMRNSNITNGNQNYNQIQCSIQNQARINPSATVYYKYPNSEHVYAEIGQGAMQNQQAIRQVPSHTVTTNLPPAYYYKNPAAGGMSIVINQAPPTVSNLSTMDIRQQQGHQTQIYQPVYTNPVMSVDSYAQQLPQNIIDYSGTGEVYQVSSNEYRGPITEHITACGRTLEASANLICPYCPNSVTFTNQDMFKLHISVSHNFICDLCGLMFHNIDDIRIHKIKHGLMDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -