Basic Information

Insect: Lasioglossum leucozonium
Gene Symbol: gtf3a
Assembly: GCA_028454225.1
Location: CM052205.1:7387737-7392056[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8.7e-05 0.0061 17.0 0.1 2 23 747 768 746 768 0.97

2 17 8.8 6.2e+02 1.2 0.6 1 19 774 792 774 793 0.91

3 17 0.97 69 4.2 1.5 3 23 802 822 801 822 0.97

4 17 0.00029 0.02 15.3 1.2 3 23 831 852 830 852 0.98

5 17 0.0042 0.3 11.7 2.1 1 23 859 882 859 882 0.95

6 17 0.0001 0.0073 16.7 0.7 1 23 888 911 888 911 0.94

7 17 1.4 1e+02 3.7 2.5 2 23 919 939 919 939 0.94

8 17 1.5e-07 1.1e-05 25.6 2.1 2 23 945 966 944 966 0.97

9 17 2.4e-06 0.00017 21.8 0.2 1 23 972 994 972 994 0.99

10 17 0.00069 0.049 14.1 2.1 2 23 1006 1028 1005 1028 0.95

11 17 0.0086 0.61 10.7 2.5 1 23 1034 1057 1034 1057 0.96

12 17 0.013 0.93 10.1 3.0 2 23 1079 1101 1078 1101 0.95

13 17 0.0012 0.086 13.4 1.4 2 23 1108 1130 1107 1130 0.96

14 17 4.2e-05 0.003 18.0 1.0 2 23 1138 1159 1137 1159 0.96

15 17 0.0019 0.14 12.7 2.1 1 23 1165 1188 1165 1188 0.96

16 17 0.35 25 5.6 3.2 2 23 1195 1216 1194 1216 0.96

17 17 0.01 0.73 10.4 2.6 1 23 1222 1244 1222 1244 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8.7e-05	0.0061	17.0	0.1	2	23	747	768	746	768	0.97
2	17	8.8	6.2e+02	1.2	0.6	1	19	774	792	774	793	0.91
3	17	0.97	69	4.2	1.5	3	23	802	822	801	822	0.97
4	17	0.00029	0.02	15.3	1.2	3	23	831	852	830	852	0.98
5	17	0.0042	0.3	11.7	2.1	1	23	859	882	859	882	0.95
6	17	0.0001	0.0073	16.7	0.7	1	23	888	911	888	911	0.94
7	17	1.4	1e+02	3.7	2.5	2	23	919	939	919	939	0.94
8	17	1.5e-07	1.1e-05	25.6	2.1	2	23	945	966	944	966	0.97
9	17	2.4e-06	0.00017	21.8	0.2	1	23	972	994	972	994	0.99
10	17	0.00069	0.049	14.1	2.1	2	23	1006	1028	1005	1028	0.95
11	17	0.0086	0.61	10.7	2.5	1	23	1034	1057	1034	1057	0.96
12	17	0.013	0.93	10.1	3.0	2	23	1079	1101	1078	1101	0.95
13	17	0.0012	0.086	13.4	1.4	2	23	1108	1130	1107	1130	0.96
14	17	4.2e-05	0.003	18.0	1.0	2	23	1138	1159	1137	1159	0.96
15	17	0.0019	0.14	12.7	2.1	1	23	1165	1188	1165	1188	0.96
16	17	0.35	25	5.6	3.2	2	23	1195	1216	1194	1216	0.96
17	17	0.01	0.73	10.4	2.6	1	23	1222	1244	1222	1244	0.98

Sequence Information

Coding Sequence: ATGCAGCACATTGAAGTAAATAATAGAGATCACAATTATAGTGAAGTAAAAATAGATAATCTTCAACATGTTGATGATAGTACTTTGAATGTATCTGCAAATGATCTAAAAGCAGTTTATAAATCAAACAAATCTTCGTTAGTACCAAACAAAGAAACATTTGGTCAAGTTAAAGATATTAATGAATTAAAAAAAATAACACCACGTGTAAAATTATTGGCTCATGATGCTAGCAGTTTAACAGAGTTAACAAAAATTTCTTTCCACAATAAAATATCTGCACAAAAAAAGGTATGCATATCGGAACAAACGAAACAGGAATTAAAAAAATATTGCAGGACTTGTGCTGGTTTAAAACTTCCATTGGTCGACATTTTTAGCGAAAAAGGCATTCAAATGAGGCTGAGTCAACAACTTAAACACTTAGAAGAAATAAATCCATACGATAGTTTGTCAACACAAATGTGTATGGATTGTATTTGTGACTTAAAAATGAGTTATAAGTTTTTTATGCAGATTAAGAAAGCAGAAGTAAAATTAAAGTCTATTCACAATTCTCTAGCAGAGACAGCAGCAAAGAATGCAGAAATGAACAAAATACAATCATCAATAATAGATCTTGAAAAGTCAGAGACAAAGATAGAAAGTTGCAAAGAACGCAGTATAATCGATCCATATTCTGGTAAGAAACACAATGAAAAAAAGACTGCACAAGATTTAATAAGTCCTCCAATGAAAGAAGAACAAAAATGTTCAACAAAAATTGAAACGATAGATATTACTAAAGAATCGGATAACAATGTTACGGTAAAAATTTTCGAAGATATGACGATTTCACATAACAGTGACGATAACGAATCTATAGAAGAGTTTGATCCAGATGATCCACCTTTTCAACCAGATAGTTCTGATGCTTTAGATTCTGATGATGAAATTAATGTTCAAACGTCAGGCGCAAGAAGGAAAAATATTCAACAAAAGGATAGTATTCTGAAGAAGTGTTTACAACCAGTCTTTATTTGTGATAATAATTCTGTCTCGGATAATAAAACTACAGATTTTAATCAAACAACATATAAATATGATACATCGTCGAATGTATACATCAAACTAGAGAAGAGTACAGAAGGTAGTAATTGTACTACAGAACCATATAGCATATCTAAGTCTGAAACTGTGTGTAACAATGAAAGTACAAAAGAATCTTCAAAACAGCCAAACATATTAAAAAGGAGACTTTTATTACAATCAAAGAAAGAACCCAGTGAAGAAACAGATGAAAATGTTTGTCAATCTAATGCCTCTGAGAAAGGTGGAACTTATAAAGACGTTAAAGTACAAAAATTGGATTTAAACAATCCTTTAAGCATTAATAGCAATCAGGAAGATGGGATCATGTATGTTACTGTTAAAGGTTCCAAACCGAATGAACTATTATTGGTCAAAGTTAAAAAAATGGATAAACCATTAGAAAAAAAAGAAGAGAAACCAGTAGGGAAGAAAAATTTTGATATCAAACCTATGGAAAAAATCCTAAAGCGGTATGAAACATTGGCCACAAAAGAAAAGGATCTATTTCCAGAGCGGACAAAAAAGTCTGAAATAAGAGAACAGATCATCGAGGAGCAAATAGAAGAGTATAAGAAAAAACGAGAAAAAGTATTAGGAGGTCATTCTAATATTTCACTTCCTTTAAAACTTGAAGAAACTCAAACTCGTTTTGTAAAACGTAATGAAACTCAGGAGAATAAAAAGTCCTCCATATGCGGCGACACTGATTCAATAGTAAATGTACAGTTTGATAAAGATAATAATGATAGTAACGCAAGTACGATAAAAAACGACAATGATAGTTCAGGGAATGGAGAGTCTGTAAAAGAGAAATCTACTAATGAAAAAACTTATGTAAATACCGAAGAATATTTGTCAAGTTTGGCAAAGCTTAAGCTGAAGTGGGAGGAAGCAAAGAAAAAAAAAGAATTTCTTCAAAAAGAACTCGACGAGTCTTATACAGAAGGAAATATTGAGAAATTAACAAGAATTCTAGGAGAGAAGGAAAAAAATTTGCAAGACTTTCAAGACTATCTGAAACAACGTAAAATTGTTGTAACAAGACTAAAAGACGAAGACATAATATCTTTGTACGAAGATAGGAATAATGCTGTGTTAAAAAACAACTTACCCGATTTAATAGATGAAAGTCAGCCTGCAGATTATATTCCAGAAGAGCATTATCTAGAGTGTGATTATTGCCCAGAGACTTTTGCTTCTAAAGATGTACTTGAGGAACATTTAAAAATGCACGATTATAAAATTATGCACTACTGTGAAGATTGTATGGAAGAGTTTCCAACAAACAAAGCGAAAAGGAATCATAATGTAATCTGTATTAAAAAGAAGTTGTGTAAATATTGTGACATGATGTTGGACTCAAAAGGAAAAAAGCGGCAACACGAACAGAAACATTGCGATAGTATGTATGGACAACTATGTGATGTGTGCGGTGAAAAATTTAAACATCAAGGAACATTAGATCAACACGTAAAGACACAGCATATGAGTTGGGAAAAGATATTTCAATGTCCAAAATGTCCTAAAAAGTTCGCTTTTAAACAAAAACTTAGCTTTCATTTGAAGTCTGTGCACACAACATTAAGAGCTTATTTATGCGAAGATTGTGGAGCAGATTTTAAAAATCCTGCAAGTCTTAGACATCATAGAATACGCAAACATCAACCAGTAGGCAATAAACGTGAATGTCCGGTTTGTCACAAGTTAGTGCCATTTTATAGTCTTTCGAAGCACATGCACACACACAAGGCATATACTATTCAGTGTCCACACTGTGATAAAATGTTTAAAAATAGTTCTACTTTGAAACAACATGTACGAATTCATGAAGATCAGCGTCAATATAGATGCGATACTTGCGGGGTTGGTTTTAATAGACGTGATGGTTTGAGGTTGCATATGAGAGTTCATGAAAAAACTGACAGCAGAGGACTAAAAGAATGCTCATGCCAAGTATGTGGTGAAAAATTTCCAAACCACTCGATGCTTGTTATACATAGAAATCGAGTTCATAAAGATGGGAGGCAATACACTTGTCACATATGTAATAGATCAATGATTTCAACTAGATCATTAGAATGGCATATGTCTCATATACACAACGAATCCCTTCCTGGCGTTGTGAAGGATGATTCGGATGGTACACCAGAAAAGAAGCGAGTATCGTGTTATCATTGTAACAAAACATTCAAAACAGAAATGATTCTAAGGACACATATTAAGAACACTCATATGGAGAAAGATCCTATGAAATGTTTAGACTGCGAGTTGACGTTCACTTCTGAAGTAAGATTAAAACACCACATGATGGTGACTCATAACAGGCTAGAAGGAACTTTACCTTGTCCTCACTGTCCAAAGAGGTTTGTAAATCAGCTCAGGttgaaaacacatatgatatctcattctgaagaaagaccatattcctgtgaaatttgtggaTTTAATTTAAAGACTAAAATACAGTTGATTAAACATCATCAGAATAGACATAGCGATGAAAGGCCTTTGCAATGTAGATACTGTCCATGGAGATGTAAACAAGTTAGCGCTCTTGTGTGTCACGAAAGAACACATACGAATGAACGACCATACTCTTGTAGTGTATGTAGACAACGTTTCAAATACTTAGGTGATAAAAACAAGCATGAAAGACGACACGAAAGTTTAGGAGGATCAGGATTTAAAAGAATAGTACCTGGTCGGAATATTAAACCGAAAATCGAAGAAGATTCTTCTTGTTCTGATCAGGAACAAGAAGGTGTAACTAACACAGAATCTCAAGTTGCTGAAGGAGAGTACGAAGAACAGACAGATCAAGATTTTAAAGAGGAACAGTTAGTTAAATTCGAAGAACAAGAAATAACAGAAGAATATGAACAAGTGTATGAACAGGAGTATGAAGAAACATCCAGAGAAGCTTCAGATGCAGCAGAAGTAATAATGAACATGGAAGATACTACTGTTTATACGGAAGAAGTAACTGCAGACAACATTGAATCTGCAGAAATAATGACAGACGAAATGATGACAAATGAAATACTGCAATCAGGTGCTGTAGTTCATTTGCAACAGGAAGATGATTCAGGAAAAATACAAGTGATCCCAGTTATGCTATCTTTACCTGATTTGTCCGATGCGAATACTGAGGTTAATTTAGCCACAGCATCAATTATGTATAATAATTGA
Protein Sequence: MQHIEVNNRDHNYSEVKIDNLQHVDDSTLNVSANDLKAVYKSNKSSLVPNKETFGQVKDINELKKITPRVKLLAHDASSLTELTKISFHNKISAQKKVCISEQTKQELKKYCRTCAGLKLPLVDIFSEKGIQMRLSQQLKHLEEINPYDSLSTQMCMDCICDLKMSYKFFMQIKKAEVKLKSIHNSLAETAAKNAEMNKIQSSIIDLEKSETKIESCKERSIIDPYSGKKHNEKKTAQDLISPPMKEEQKCSTKIETIDITKESDNNVTVKIFEDMTISHNSDDNESIEEFDPDDPPFQPDSSDALDSDDEINVQTSGARRKNIQQKDSILKKCLQPVFICDNNSVSDNKTTDFNQTTYKYDTSSNVYIKLEKSTEGSNCTTEPYSISKSETVCNNESTKESSKQPNILKRRLLLQSKKEPSEETDENVCQSNASEKGGTYKDVKVQKLDLNNPLSINSNQEDGIMYVTVKGSKPNELLLVKVKKMDKPLEKKEEKPVGKKNFDIKPMEKILKRYETLATKEKDLFPERTKKSEIREQIIEEQIEEYKKKREKVLGGHSNISLPLKLEETQTRFVKRNETQENKKSSICGDTDSIVNVQFDKDNNDSNASTIKNDNDSSGNGESVKEKSTNEKTYVNTEEYLSSLAKLKLKWEEAKKKKEFLQKELDESYTEGNIEKLTRILGEKEKNLQDFQDYLKQRKIVVTRLKDEDIISLYEDRNNAVLKNNLPDLIDESQPADYIPEEHYLECDYCPETFASKDVLEEHLKMHDYKIMHYCEDCMEEFPTNKAKRNHNVICIKKKLCKYCDMMLDSKGKKRQHEQKHCDSMYGQLCDVCGEKFKHQGTLDQHVKTQHMSWEKIFQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECPVCHKLVPFYSLSKHMHTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKTDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESLPGVVKDDSDGTPEKKRVSCYHCNKTFKTEMILRTHIKNTHMEKDPMKCLDCELTFTSEVRLKHHMMVTHNRLEGTLPCPHCPKRFVNQLRLKTHMISHSEERPYSCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNIKPKIEEDSSCSDQEQEGVTNTESQVAEGEYEEQTDQDFKEEQLVKFEEQEITEEYEQVYEQEYEETSREASDAAEVIMNMEDTTVYTEEVTADNIESAEIMTDEMMTNEILQSGAVVHLQQEDDSGKIQVIPVMLSLPDLSDANTEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684931;
90% Identity: iTF_00184099;
80% Identity: -