Basic Information

Insect: Lasioglossum leucozonium
Gene Symbol: -
Assembly: GCA_028454225.1
Location: CM052212.1:7005344-7014818[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0004 0.029 14.9 0.7 2 19 470 487 469 491 0.89

2 18 3.9e-05 0.0028 18.1 3.2 1 23 497 519 497 519 0.98

3 18 0.00036 0.026 15.0 0.1 3 23 527 548 525 548 0.94

4 18 0.46 32 5.3 1.8 1 23 555 578 555 578 0.98

5 18 9.9e-05 0.007 16.8 0.8 1 23 582 604 582 604 0.97

6 18 0.0025 0.18 12.4 0.5 1 23 610 632 610 632 0.98

7 18 0.0002 0.014 15.9 2.3 1 23 638 660 638 660 0.96

8 18 0.003 0.22 12.1 0.1 1 17 665 681 665 682 0.90

9 18 2.8 2e+02 2.8 0.4 2 19 1188 1205 1187 1206 0.81

10 18 2 1.5e+02 3.2 2.1 1 23 1215 1238 1215 1238 0.97

11 18 1.1e-05 0.00075 19.8 0.1 1 23 1244 1266 1244 1266 0.97

12 18 0.1 7.3 7.3 5.0 1 23 1272 1294 1272 1294 0.94

13 18 1.8e-05 0.0013 19.1 0.4 3 23 1302 1322 1300 1322 0.97

14 18 0.6 43 4.9 0.7 2 23 1329 1351 1328 1351 0.94

15 18 0.0006 0.043 14.3 3.5 1 23 1355 1377 1355 1377 0.98

16 18 0.028 2 9.1 0.7 1 23 1382 1404 1382 1404 0.98

17 18 1.4e-07 1e-05 25.7 0.6 1 23 1410 1432 1410 1432 0.97

18 18 2e-05 0.0014 19.0 1.6 1 21 1437 1457 1437 1458 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0004	0.029	14.9	0.7	2	19	470	487	469	491	0.89
2	18	3.9e-05	0.0028	18.1	3.2	1	23	497	519	497	519	0.98
3	18	0.00036	0.026	15.0	0.1	3	23	527	548	525	548	0.94
4	18	0.46	32	5.3	1.8	1	23	555	578	555	578	0.98
5	18	9.9e-05	0.007	16.8	0.8	1	23	582	604	582	604	0.97
6	18	0.0025	0.18	12.4	0.5	1	23	610	632	610	632	0.98
7	18	0.0002	0.014	15.9	2.3	1	23	638	660	638	660	0.96
8	18	0.003	0.22	12.1	0.1	1	17	665	681	665	682	0.90
9	18	2.8	2e+02	2.8	0.4	2	19	1188	1205	1187	1206	0.81
10	18	2	1.5e+02	3.2	2.1	1	23	1215	1238	1215	1238	0.97
11	18	1.1e-05	0.00075	19.8	0.1	1	23	1244	1266	1244	1266	0.97
12	18	0.1	7.3	7.3	5.0	1	23	1272	1294	1272	1294	0.94
13	18	1.8e-05	0.0013	19.1	0.4	3	23	1302	1322	1300	1322	0.97
14	18	0.6	43	4.9	0.7	2	23	1329	1351	1328	1351	0.94
15	18	0.0006	0.043	14.3	3.5	1	23	1355	1377	1355	1377	0.98
16	18	0.028	2	9.1	0.7	1	23	1382	1404	1382	1404	0.98
17	18	1.4e-07	1e-05	25.7	0.6	1	23	1410	1432	1410	1432	0.97
18	18	2e-05	0.0014	19.0	1.6	1	21	1437	1457	1437	1458	0.95

Sequence Information

Coding Sequence: ATGGAGCTGGGGGAGGGACAGGCGCAGATTTGTCGACTTTGCGGCCAGTACGAGAGCATATACATCGACGTGTTCAGCGAAGAAGGCACCAAGAGACTTTTAGGCCTGAAAATCCATTCGAAAATCAACATTCTGATAGATGAGAGGGATCCTCTGCCCAAGGCGATCTGTGTTCAGTGTCTGGGCAAGCTCGAATTCGTTTGCGACTTCCAAGAGGAGTGTCTTCGCACCCAACATGTGTTACGCGATCGATACAATCTACCACCCTTAACAGAGTTTGCCGAAGTAAAGACTGAAGAAACAGCACCAAGCACATCGACGAACAATAACAACAACGACATCGACAAAAACCTTAATCCTCCAGCCAAGGAAAGTGTTAAAGAAGTAGCACAACGTGTTTCGAAAACGACAGCGAAGACTCAGAGAAATTTACGAAGTcaacatcaagcgaacagtcacagtaatggtatcactagcagcagcagcagtaacggtaacaataatggtaacagtgtcggtaacGAAACTGCTAAAGATCAAACCACCACCGCTGAAAGCACAACGGAGGATAATACCGACAATATCGAAATCGTTCAGAGCATCGAAAATACGCCCACGAGATGGCTCAGAAGTAGGCAAAACGCAGAAACTACTACGACGAATGAAACAACAACCGATACACCGATCGCGAATAGGCTTAGAAGTCACGGTAATACCGCTGCAGAGGTAAGCGTGAGTAGTCCTCGCAGTAATTCCACCGAGACTAGTGGAAAGCAACAAGACCCTAACACCATACAAATCCCAACGTCCGCTTTGAACAAGCTTCTGACCATCGTGTCAAATTCACCAAACATAGAAGTATCTGCAAAGGAATCGAGAAACCAAAGCAACGATACGGAAGATATCAGTTTTACAGTCGAATTGTGTAAAAAGGAGAGCGACGACATTGCCACTGTACGAGCCAGAGTATTTCCAGACCAAGGCTCGTGTTTGGTAGATGAGTCTATCGTTGGTCTTCTACAAAATCAAAGTTGCGTTGAGGTAAACAGTATAATAAACACTATCATCAGCAGCAGTTTAAAGAATGGTAGTTCGACGAAGTCAAAAGATTCGGCCGAATTCGAGCAAAAATGGCAGGCTTCTCAGAACCCGGAAGAACTATTCAAGATCGATGGAGAGGAGATTCGCGTGGACGACAATGTGGAACACATCGTAACGGATAGTCAAAACGGTTACTCGTGCAAGCTGTGTTGTAAATTCTACGAGCGTAAAGACAAATGTATGGTTCACGTGAAGACCCATCTGGGAATCAAACAGTACACGTGTATTCTATGCAACGCGAAATTCGTATGCAAGTCCGACGTGATGAAACATATACGGTGCTCGCATACCAATCCTAGACCGATACAATGTCCAAAATGTCCAAAGAGGTTCAAATCCAAGTTTTACCTAATGGAACACGACAACGTGCACAAAGGCGTCAGGCCGTACGCTTGCACGGATTGCGGCCAGAGTTACCATCACAAAGTATCGTTGCAGATACACATGAAATCGCATTTACCCCCACAGAACTTGGCTTGCGAGTATTGCGGTAAAGTGTTCCCGTATCGTACGAGACTGTTGAGTCATATCGCCAGCGTACACCTGAAAAATCGTCGGAACTTCAGGTGCCGGTTTTGCTACAATCTCTATTCGAGTCTTTCGGTTTTAAACGAACACATTAAAACGCGTCACGCGACTACCTACACTTGCGAAGTGTGCACCAAAACGTTCAAAGTCGCGTCGAAATACAAGGCTCACGTGTTGCAGCACACCAACCCTAAACCTTTCGTGTGCAATGTCTGTAACAATAGATACGCGTCGAAAGCATTCCTGAACGAGCATCTACTGAAACACGAGGGGCTGAGGAAACATATTTGCCAAAAGTGTGGCGCGAGATTCGCCCAAGCTAGTCACTTGGCCGCGCATCGGCACGTGCACGGCGAAAAGAAGCACGCTTGTCCGGAATGCGGGCGAAAGTTTAACAGACGCGACAACATGAAGATAAAGGAGAACGACGGATTGCCGCACGTTGTTTGCTTGCGGTGCATAGGCACGTTGGAGTTCTTGTGCGACTTTTACAGCTGTTGTCAGCTCACCCAAAACAAACTCTCGTCGAAGGAGGCTAGCAAATACTCGTCGGAGAATACATCCAGAAGAATACCGCAGCACGAAAATGATACCGCATCTAACAAGGAAAATGTTCAGCCATCTTCAAACGAAACGAAACGAAAAAGCAAAGTTTCGTCGCCCAGCAAAAAGGACCGGCCTACGACCGAAAACACATTGGACGATCGAAAACAGTCGGCTATGAACAATGCGATTGTTCAGAAGCAAAAGTTGCAGGACAAACAAAGCAACGACAACGCTTCACCATGTGAAAATCCGCTGTCGATAGAGACGGAAAACTTGAAAAACTGTGAATTTTCAATGAAAAAAGGCGAAGCACAAGATAAAATAGCTTTAGCCCAACCAAAGCGACCCGTAAGAGGCCGAAAAACTCAATTACAGAAACTGAGAGAAGCTGGTTTATCTTTAAGTAGAGAAAGAGAATCTCAGAAAGGTTCGGATAAGATAGAACGCGATGGGAATCAACGTAAAAGACAGTGTTTGAGTACAATTTGCACTAACGGCACATCGAATGTAACAAAGAACGCTGTGGCCTTGTCCAAGTCGCAAATCGAACTACCATTAGAGAATAAAATAGAAACAGTAGCGACGATACCGTCGAGTAAACGCCATATTAAAAATGATGATGCGAATAAAGATTTAATCGGTGGCATAGCGGAGGAGACTTTAAAGGACAAACATTTAAACGAGGAAACAAAAGAGGAGAGCTCCGCAAAAAGCAAAGTGATATCTGTAATCGTAAAGCAAGAGGAAGTAGACGTAGAAGTAATTTCCCAACAATCGGGAAAGCCGAACCAACTGGTTTGGATTCCAAACAAAATACTGACAGAGGGACAAACGATTGACCCTGCGATCGATCAGGATCAAGAGATTGATCTGGAGTTGTCGTTACGGTTGAGTCCTGAATTGGACGAGGATAGGGATAATTCGGATATCGTCGTCACCACTCGTACCGATTTAAATGATTCAGATGATTCCGACGACTCGGACGAGTCGGGCGAGTCGGGCGAGTCGGACGAGTCGGACGATTCTGACGATTCAGATGATCCAGACGATCCAGACTATTCCGACGATTCCGAGCAGCCGAAAGCGAATATACGGTCCGTAGAACAAACCCGTGCGACCGTTATAAGATCGCCGCGGGAAAGTTCTGTATCGGCACTCGTTAAATCTCATGTGACCAACAATATTGACGATGTAAAAAATGATTCGAAATGCGATTTACAGTTTTCCCAAGGTCTTCAGGGTCGGGGCTTTTATACCTCTAAGATTTCCGAATTGATAAGTGAAGAACAAAAAGAAGAAATTGAGACTTATTATAGAATTGATATGTCCACCGTTAATTCGGAAGAAGTAGAAAAAAATTTGACTGTAATCGATAAAAAGAACATTCGTTGCAACATCTGTGGAACTCTTTATCGTCGAATGGACAAGTGCCAGGTACATATTTGGGGCCATTTGCAGATGAAACCGTTTCAATGCAAAGCGTGCAACTTTGCTACGGTAACTGTTAGCAACGTTCGTTGCCATATCAGAAAAAGTCATTTAAAGATCAAACCGTTTGCGTGTGATCTTTGCGGAAAGAAATACGTCACTGCCGGATTATTGGAGCAACATATGAATAGCCACACAGGAGCCCGTCCATTTAAGTGTACAATTTGCAATTTTTCATGCTCGACCCGACAAATGCTAAGTTATCACAGCAGTAATCACAAACCACACAAGGACATCGCTTGTAAAATTTGTGGCATAGAATTCTTTTCGAGAAGCAAATTACGCACGCACATGATCACTCATAAGAAAGGTAAAGTCGTCATGTGTAAACTATGTTCCGCTTATTTATCAAATGCGAAAGCATTGGAATCGCACCACAAAAATCTTCACATGCAAGATTATGTCTGTAATATATGTGGCAAACACATGAAATCGAAAAAAGCTTTGCACAATCATCAAAACGTTCATTCTACGGGAAAGTACAAGTGTACTTTATGTCCAAATGTGTACAAGAGCAGCCAAATACTAAAGGAGCATCTCTTGAAGCACGAAGGAATTAGGAAATACAGGTGCAGTGATTGTGGCAAGAGCTTCGCACAACAGTCTCATTTGGCTGCTCATAAGGCGGTACACAGCGGAATTAGATTCTATTGTCCTGGATGCGACAAATCTTTCAACCGACACGACAACATGAAGATACACACAAAACGGTGTAAACCGTTTCTCGCAAATCCAGAACTAAAAAAGCTTTTAATAAAAAAAGAAAGGAGTTCGTCGATTAGCAAAGTAATCAAGTCAACCGAAGATACAACCAGTAAGGACTCTTCGTCGTTGAATTTCGAAAGTGTCTTCGAAAAACAGACCGACAACAAAGAGATATCGATAAAGACTGTAAACAAAAAAGAAGAGACTGCAATGAAATTAGGGTTGAATATCTCTTGCATCGAATCCTCGGATAAAACGTGGACTCACGATGACGTGTATGAAGAGGTAGGGGAACTAACGGGAGCCGCCGCACTCAGTGCGATTAAAATCGCTGAAACGAACGATACGTTCATTTTGGAAAACGATAACTCTCTGCACGTGCGCAAATTCCATTACGGCAATGCCGAAGAGTACAAACCAATAGTATAA
Protein Sequence: MELGEGQAQICRLCGQYESIYIDVFSEEGTKRLLGLKIHSKINILIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQHVLRDRYNLPPLTEFAEVKTEETAPSTSTNNNNNDIDKNLNPPAKESVKEVAQRVSKTTAKTQRNLRSQHQANSHSNGITSSSSSNGNNNGNSVGNETAKDQTTTAESTTEDNTDNIEIVQSIENTPTRWLRSRQNAETTTTNETTTDTPIANRLRSHGNTAAEVSVSSPRSNSTETSGKQQDPNTIQIPTSALNKLLTIVSNSPNIEVSAKESRNQSNDTEDISFTVELCKKESDDIATVRARVFPDQGSCLVDESIVGLLQNQSCVEVNSIINTIISSSLKNGSSTKSKDSAEFEQKWQASQNPEELFKIDGEEIRVDDNVEHIVTDSQNGYSCKLCCKFYERKDKCMVHVKTHLGIKQYTCILCNAKFVCKSDVMKHIRCSHTNPRPIQCPKCPKRFKSKFYLMEHDNVHKGVRPYACTDCGQSYHHKVSLQIHMKSHLPPQNLACEYCGKVFPYRTRLLSHIASVHLKNRRNFRCRFCYNLYSSLSVLNEHIKTRHATTYTCEVCTKTFKVASKYKAHVLQHTNPKPFVCNVCNNRYASKAFLNEHLLKHEGLRKHICQKCGARFAQASHLAAHRHVHGEKKHACPECGRKFNRRDNMKIKENDGLPHVVCLRCIGTLEFLCDFYSCCQLTQNKLSSKEASKYSSENTSRRIPQHENDTASNKENVQPSSNETKRKSKVSSPSKKDRPTTENTLDDRKQSAMNNAIVQKQKLQDKQSNDNASPCENPLSIETENLKNCEFSMKKGEAQDKIALAQPKRPVRGRKTQLQKLREAGLSLSRERESQKGSDKIERDGNQRKRQCLSTICTNGTSNVTKNAVALSKSQIELPLENKIETVATIPSSKRHIKNDDANKDLIGGIAEETLKDKHLNEETKEESSAKSKVISVIVKQEEVDVEVISQQSGKPNQLVWIPNKILTEGQTIDPAIDQDQEIDLELSLRLSPELDEDRDNSDIVVTTRTDLNDSDDSDDSDESGESGESDESDDSDDSDDPDDPDYSDDSEQPKANIRSVEQTRATVIRSPRESSVSALVKSHVTNNIDDVKNDSKCDLQFSQGLQGRGFYTSKISELISEEQKEEIETYYRIDMSTVNSEEVEKNLTVIDKKNIRCNICGTLYRRMDKCQVHIWGHLQMKPFQCKACNFATVTVSNVRCHIRKSHLKIKPFACDLCGKKYVTAGLLEQHMNSHTGARPFKCTICNFSCSTRQMLSYHSSNHKPHKDIACKICGIEFFSRSKLRTHMITHKKGKVVMCKLCSAYLSNAKALESHHKNLHMQDYVCNICGKHMKSKKALHNHQNVHSTGKYKCTLCPNVYKSSQILKEHLLKHEGIRKYRCSDCGKSFAQQSHLAAHKAVHSGIRFYCPGCDKSFNRHDNMKIHTKRCKPFLANPELKKLLIKKERSSSISKVIKSTEDTTSKDSSSLNFESVFEKQTDNKEISIKTVNKKEETAMKLGLNISCIESSDKTWTHDDVYEEVGELTGAAALSAIKIAETNDTFILENDNSLHVRKFHYGNAEEYKPIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00863429;
90% Identity: -
80% Identity: -