Lleu000645.1
Basic Information
- Insect
- Lasioglossum leucozonium
- Gene Symbol
- Smarcc2
- Assembly
- GCA_028454225.1
- Location
- CM052210.1:10778335-10780383[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.4e-15 5.5e-12 45.6 0.2 3 44 235 276 233 278 0.95
Sequence Information
- Coding Sequence
- ATGGCGGATCTGGATGAGCCGATGGAAGGCGACAAGGGAAGTTCTCAAAGCACCCAAGACAGGGAAGAACGAGATACTAGCAAAGAAAGAGGCGATGGAAGTAAAGGCGACGAGCCAGAAGACAATGTAACAGAGCAAACCCATCATATCGTCGTTCCCAGCTATTCTGCTTGGTTCGATTACAATTCGATTCATACCATCGAGAAGAGAGCTCTGTCGGAGTTTTTCAATGGTAAAAATAAATCGAAAACGCCAGAAATCTATTTGGCATATAGGAATTTTATGATCGATACCTACAGATTAAATCCTACAGAGTACATTACGTCGACCGCTTGCAGACGCAACTTGGCCGGCGATGTATGCGCGATTATGCGTGTACACGCGTTCTTGGAGCAATGGGGACTTATCAATTATCAGGTGGACGCGGAGTCGAGACCAACGCCTATGGGACCACCGCCAACGTCGCATTTCCATGTACTGTCGGATACACCGTCAGGTTTGGCTCCGGTGAATCCAAATCCACCGAAAACACCGCAACCATCGGCTGCGAAAACTTTGCTCGATCTAGAGAAAAAATCGAACGTGATGGGATCGGAAGAAAAAGCTTCGGCCGGAGCGATGGCAAACTTTGGACTAAAGATAGATCAGTATTCGAGAAAGCCAGCAGTTTTGAAGAACAAGCAAGCTGCCGGCGCTACCCGCGACTGGACGGAGCAGGAAACGTTGTTGTTGTTGGAGGGATTAGAGCTACACAAAGATGATTGGAATAAAGTGTGCGAGCACGTTGGCTCAAGGACCCAGGACGAGTGCATATTACATTTCTTACGGCTTCCGATAGAGGATCCGTATTTGGAGGAAGGAGGACCAGAAGGTTTAGGTCCTTTGGCTTACCAACCGGTACCATTCTCGAAAGCAGGCAATCCAGTTATGAGCACAGTTGCATTTTTGGCTTCCGTTGTTGATCCCAGAGTGGCGGCAAGTGCCGCGAAAGCTGCTATGGAGGAATTTGCAGCTATCAAGGATCAAGTGCCGGCCGCTTTGCTGGACCAACATCTCAGAAACGTCCAAGCCAGCGCGAACTCGGACGGCAAGTTCGATCCAGCTGCAGGCTTGGCACAATCGGGTATAGCTGGTACGGGTCCGCCCGAACCTCCAGACGACACAGCAACACCGTCGACTACCGGAAGCGTACCGACAACAGCTGCTACCTCGCCGCATTCGGCCACATCGACGCCGATAGAAACAAAGAAAGAGGAACAGGAAAAACCAAAGGAATCCGAAGTTGAGCAAACTCAGTTGGAGATTGGAAAGAAAGAGGATGAAATGAAGGAACCTGAAGAGGATACGAAGACGCCTGTGGACGTCGAGGCTATGGAAGCGAAAGAGAAGAAGGATAAGGTGGTGCGAGATGCGCAACTGCAGTCTGCAGCCGCCGCTGCACTGGCGGCAGCTGCCGTCAAGGCGAAGCATTTGGCTGCCGTGGAAGAACGGAAAATCAAGTCCCTGGTGGCGTTGCTCGTCGAAACGCAAATGAAAAAGTTGGAAATTAAACTGCGACATTTCGAGGAGCTGGAAACCACGATGGAAAGAGAACGCGAGGGTCTCGAGTATCAGAGGCAACAGCTGATCACGGAGAGGCAACAGTTCCACCTGGAACAATTAAAAGCTGCTGAATTTCGAGCGaggcaacaagcgcaccaacgtttagcccaagaacagcaacaacagcagcagcaacagaatcaacatccaccttggcaacctgccgcgcaacaacagcagcaacaacaacaacaacagcaaccaccgagccctcaggcatcggcccaacaaccagcaGCTCATACGCCTCCGCAACAGGCGTAA
- Protein Sequence
- MADLDEPMEGDKGSSQSTQDREERDTSKERGDGSKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKTLLDLEKKSNVMGSEEKASAGAMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAFLASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANSDGKFDPAAGLAQSGIAGTGPPEPPDDTATPSTTGSVPTTAATSPHSATSTPIETKKEEQEKPKESEVEQTQLEIGKKEDEMKEPEEDTKTPVDVEAMEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLAQEQQQQQQQQNQHPPWQPAAQQQQQQQQQQQPPSPQASAQQPAAHTPPQQA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00730666;
- 90% Identity
- -
- 80% Identity
- -