Lfig004536.1
Basic Information
- Insect
- Lasioglossum figueresi
- Gene Symbol
- nfxl1
- Assembly
- GCA_028455805.1
- Location
- CM052191.1:5087057-5089978[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.1 1.1e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 19 0.15 1.5e+03 -0.5 0.2 4 10 161 167 160 167 0.95 3 19 5.4e-08 0.00055 20.1 15.5 1 18 175 191 175 192 0.98 4 19 1.1e-07 0.0011 19.1 12.3 1 19 229 246 229 246 0.94 5 19 0.53 5.4e+03 -2.3 1.2 6 10 271 275 270 275 0.88 6 19 1.4e-05 0.14 12.4 11.2 1 18 281 299 281 300 0.92 7 19 6.6e-05 0.67 10.2 8.6 1 18 336 353 336 354 0.97 8 19 0.0021 22 5.4 7.0 1 12 388 399 388 399 0.94 9 19 0.99 1e+04 -3.1 1.3 6 10 409 413 408 413 0.90 10 19 2.1e-06 0.022 15.0 15.0 1 18 419 436 419 437 0.91 11 19 1.7 1.7e+04 -3.9 1.3 6 10 466 470 465 470 0.76 12 19 0.0001 1.1 9.6 9.8 9 19 485 495 483 495 0.90 13 19 0.0034 35 4.8 5.6 1 12 505 515 505 515 0.95 14 19 0.86 8.9e+03 -2.9 5.8 14 18 547 551 547 552 0.89 15 19 0.00057 5.9 7.2 8.9 1 12 588 599 578 599 0.91 16 19 1.4 1.5e+04 -3.6 3.2 5 10 614 619 611 619 0.77 17 19 0.0022 23 5.3 16.0 3 19 628 644 627 644 0.92 18 19 2 2.1e+04 -6.6 3.4 9 13 650 654 650 654 0.71 19 19 0.00041 4.2 7.7 9.3 1 16 689 703 689 709 0.88
Sequence Information
- Coding Sequence
- ATGCAGAAGTTCAGACGTGCCCAAGCACAAGATAAGATAGCGATTAACAAGCATTTAGAAGCTAATGCTTATTTAGAATCATCCAGCGAGGATGAGGACGATGTAAATACAGAAGACATAGAAAATGTAGTTGGCAAAGTGTTGTCTGCCTATCAAGGAGGAGAGGTAGACACGGAAAAGACTTTATGTTACTTAGTTAATCTATTTCAATCTGGCAGCACAGTTTGTTTAATATGCATCTCAACTGTAAAGAAAGCAGACGCGATCTGGAACTGCAGCAAGTGTTTCGCTTTTTTACATTTATCCTGCATTCTACATTGGATACGAGATAGCCTTAATGTAAAACGTGAGAAAGGTGTTGCTCCTATTTGGGCATGCCCAAAATGTCGTATGGACTATGGACAAGACGAAGTTCCTCGTAATTATAAATGCTTCTGTAAGAAAGTTATTGACCCTGTGTTCCAACCATGGAGTATACCGCATTCCTGCGGAGATGTATGCGGCAAACTCTTGCAACCAGAGTGTGGTCATAAATGTGTTGTACTTTGCCACCCAGGGCCATGCCCACCATGCGCGAAAACAGTATCGATCAAATGCTTTTGTGGTAAACAGGCTCCTGAACAAAGAAGATGCAATGCCAAGAACTGGAGTTGTGGCACGGAGTGTAACAAAAAGTACAAATCCTGCTCGCACAGCTGCGTGCAACTATGCCATGCAGGAGATTGCCCTCCTTGCTCGGAGTCGTTGCTACTCGAATGTCGCTGTAAGAGCAGCACAGAAATAAGGCAATGCTATGAAGGTGCGTGGAGTTGTGAGAAACCTTGTCTCCAGCCTCTGTCCTGCAACGTTCACATTTGCCAGAGCACATGCCATTTGCCCGGAGACTGTGGTCCGTGCGCTTTGGAAAAGAATAGAACATGTCCCTGTGGCAAGAAGCGTTACGCGGTTTCTTGCAGACAGGAACAGTTGCCCACGTGCGGAGACACATGCGACAAGCTACTGGATTGCGGTTCGCATTATTGCAATATGAGATGCCACATGGATCAATGCGGACAATGCTTAGAAGTAGTAACAAAGTCCTGTCGATGTGGTAGTTACAAGAAAGAAGTCGCCTGTGGCAAAGAGTTCCACTGCAACAAGAAATGCATGCAGATGCGCCTCTGCGGCAGGCACATGTGCAACAGAAAATGCTGCGATTGCCTGATCAAAAACACGTTCAACGAGTGCGAGAAAATTTGTGAGAATGCTTTAAATTGTCGCAAGCACAAATGTTCGGGTCCGTGTCACAGTGGTCCGTGCTACCCTTGTGAGCGTACGGACATTATCCAATGCAGATGCGGATACAACAAAGTAACGGTACCGTGCGGCACCACAAAGAGAGTGAAGCCTCCACCGTGCAATAAACCGTGCAAGGTGCCGCCGATCTGCCATCACCCTAAAAGGGAAACGCATAAATGCCACCAAGGTCCGTGTCCACCCTGTAAAAAGATTTGCGATTTGGTGTACAAACGATGCGGTCATTCTTGCGTTGCCATTTGCCACACGAAGGTTTGGGTGAAAGTGAACAAAAACGACGTGAAAGCGCAACCTGCGGGGCCGTGGGAGATACAGAAAGAAACGAAGCAGCTGAAAACGTTACCGTGTCCGCCTTGCGAGGTGTCAGTACAGGTCACATGTTTGGGAGGCCACGAAACACGTCCGTGGCCTTGTCACATGGCACGGCCTACGTCTTGCGGAAGACTTTGCGGGAAAACGTTGCCCTGCACCAATCATACTTGCGAGCTAGTTTGCCACAAAGTATTATCCACAGAGAATACCAAAAATGCTATTCCGTGTATGAATTGCGAGAAACCGTGCGAGTTCCCGCGTCCACAAGGTTGCACGCATTCCTGTCCAAAGTCGTGTCACCCGGCGCCCTGTAACCCTTGCAAACAGCTAGTTAAAATTCCGTGTCATTGCGGTATAGTCACTTTGTACAGAAGATGCGCCGAGTTGACATCGGCTACTGCAGGACAACGCAACGACTTGCTCAAATGTGGGAATCAGTGCCCTAAAAATTATCCATGCGGTCACCGATGTATGTATGATTGCCATCCCGGCGTATGCAAAAACGAGAATGAATGCAATAAAAAGGTGAAGTTATTCTGTTCGTGTAAACGCATCAAGAAGGATTTTGCATGCTCATTGGTACAAAAGGAACAAATTCGGTTACATTGCGATGATGCTTGTAAGAGGTTGAAGATGGAGAAGAGTCTGGCGGAAGCAGCTTTGCTAGAACAAAAACGGCAGGCCGAAGAAATACGTAATCAAGAGGAGATCGAAAAATTCGAGAGGAAATTCAAACCGCGGCGCAAAGGAAGGGACAAGTACGATAAGAAACAATCGCGAAAAGAAACGAATAGTCACTATTGGAAATATTGGATTCTAGCGATTTTACTGTGCACGGTAGGCATAGCGATAGGCTATTGTTCGGttcaggggaccacaaattttggacgtttctttatataa
- Protein Sequence
- MQKFRRAQAQDKIAINKHLEANAYLESSSEDEDDVNTEDIENVVGKVLSAYQGGEVDTEKTLCYLVNLFQSGSTVCLICISTVKKADAIWNCSKCFAFLHLSCILHWIRDSLNVKREKGVAPIWACPKCRMDYGQDEVPRNYKCFCKKVIDPVFQPWSIPHSCGDVCGKLLQPECGHKCVVLCHPGPCPPCAKTVSIKCFCGKQAPEQRRCNAKNWSCGTECNKKYKSCSHSCVQLCHAGDCPPCSESLLLECRCKSSTEIRQCYEGAWSCEKPCLQPLSCNVHICQSTCHLPGDCGPCALEKNRTCPCGKKRYAVSCRQEQLPTCGDTCDKLLDCGSHYCNMRCHMDQCGQCLEVVTKSCRCGSYKKEVACGKEFHCNKKCMQMRLCGRHMCNRKCCDCLIKNTFNECEKICENALNCRKHKCSGPCHSGPCYPCERTDIIQCRCGYNKVTVPCGTTKRVKPPPCNKPCKVPPICHHPKRETHKCHQGPCPPCKKICDLVYKRCGHSCVAICHTKVWVKVNKNDVKAQPAGPWEIQKETKQLKTLPCPPCEVSVQVTCLGGHETRPWPCHMARPTSCGRLCGKTLPCTNHTCELVCHKVLSTENTKNAIPCMNCEKPCEFPRPQGCTHSCPKSCHPAPCNPCKQLVKIPCHCGIVTLYRRCAELTSATAGQRNDLLKCGNQCPKNYPCGHRCMYDCHPGVCKNENECNKKVKLFCSCKRIKKDFACSLVQKEQIRLHCDDACKRLKMEKSLAEAALLEQKRQAEEIRNQEEIEKFERKFKPRRKGRDKYDKKQSRKETNSHYWKYWILAILLCTVGIAIGYCSVQGTTNFGRFFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00865697;
- 90% Identity
- iTF_00183647;
- 80% Identity
- -