Basic Information

Insect: Lasioglossum figueresi
Gene Symbol: -
Assembly: GCA_028455805.1
Location: CM052200.1:15471933-15483495[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00036 0.034 14.8 0.7 2 19 468 485 467 489 0.89

2 17 3.5e-05 0.0032 18.0 3.2 1 23 495 517 495 517 0.98

3 17 0.00032 0.03 15.0 0.1 3 23 525 546 523 546 0.94

4 17 0.41 38 5.2 1.8 1 23 553 576 553 576 0.98

5 17 8.8e-05 0.0082 16.7 0.8 1 23 580 602 580 602 0.97

6 17 0.0029 0.27 12.0 0.5 1 23 608 630 608 630 0.98

7 17 0.00017 0.016 15.8 2.3 1 23 636 658 636 658 0.96

8 17 0.0027 0.25 12.1 0.1 1 17 663 679 663 680 0.90

9 17 0.97 90 4.0 1.7 1 23 1233 1256 1233 1256 0.97

10 17 1.1e-05 0.001 19.6 0.1 1 23 1262 1284 1262 1284 0.97

11 17 0.11 10 7.0 2.1 1 23 1290 1313 1290 1313 0.93

12 17 0.00019 0.017 15.7 0.5 2 23 1320 1341 1319 1341 0.97

13 17 0.49 45 5.0 0.8 2 23 1348 1370 1347 1370 0.94

14 17 0.00056 0.053 14.2 3.0 1 23 1374 1396 1374 1396 0.98

15 17 0.025 2.3 9.0 0.7 1 23 1401 1423 1401 1423 0.98

16 17 4.7e-07 4.4e-05 23.9 0.7 1 23 1429 1451 1429 1451 0.97

17 17 6.2e-05 0.0058 17.2 1.5 1 21 1456 1476 1456 1477 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00036	0.034	14.8	0.7	2	19	468	485	467	489	0.89
2	17	3.5e-05	0.0032	18.0	3.2	1	23	495	517	495	517	0.98
3	17	0.00032	0.03	15.0	0.1	3	23	525	546	523	546	0.94
4	17	0.41	38	5.2	1.8	1	23	553	576	553	576	0.98
5	17	8.8e-05	0.0082	16.7	0.8	1	23	580	602	580	602	0.97
6	17	0.0029	0.27	12.0	0.5	1	23	608	630	608	630	0.98
7	17	0.00017	0.016	15.8	2.3	1	23	636	658	636	658	0.96
8	17	0.0027	0.25	12.1	0.1	1	17	663	679	663	680	0.90
9	17	0.97	90	4.0	1.7	1	23	1233	1256	1233	1256	0.97
10	17	1.1e-05	0.001	19.6	0.1	1	23	1262	1284	1262	1284	0.97
11	17	0.11	10	7.0	2.1	1	23	1290	1313	1290	1313	0.93
12	17	0.00019	0.017	15.7	0.5	2	23	1320	1341	1319	1341	0.97
13	17	0.49	45	5.0	0.8	2	23	1348	1370	1347	1370	0.94
14	17	0.00056	0.053	14.2	3.0	1	23	1374	1396	1374	1396	0.98
15	17	0.025	2.3	9.0	0.7	1	23	1401	1423	1401	1423	0.98
16	17	4.7e-07	4.4e-05	23.9	0.7	1	23	1429	1451	1429	1451	0.97
17	17	6.2e-05	0.0058	17.2	1.5	1	21	1456	1476	1456	1477	0.95

Sequence Information

Coding Sequence: ATGGAGTTGGGGGAGGGAGAGGCGAAGATTTGTCGACTTTGCGGCCAGTACGAGAGCATGTACATCGACGTATTCAGCGATGAAGGCACCAAAAGACTTTTAGGCCTGAAAATCCATTCGAAAATCAACATTCTGATAGATGAGAGGGATCCTCTGCCCAAGGCGATCTGTGTTCAGTGTCTGGGCAAGCTCGAATTCGTTTGCGACTTCCAAGAGGAGTGTCTTCGCACCCAACAAGTGTTACGCGATCGATACAATCTACCACCCTTAACAGAGATTGCCGAAGTAAAGACTGAAGAAACAGCACCAAGCACATCGACAAACAATAACAACAATGACATCGACAAAAACCTTAATCCTCCTGCCAAGGAAAGTGTTAAAGAAGTAGCACAACGCGTTTCAAAAACGACAGTAAAGACTCAGAGAAATTTACGAAGTCAACATCAAGCGAACAGTCACAGTAATGGTATCACTAGCAGCAGCAGTAACAGTAACAATAATGGTAATGGTATCAGTAACGAAGCTGGTAAAGATCAAACCACCGCTGAAAGCACAACGGAGGATAATACAGACAATATCGAAATTGTTCAGAGCACCGGAAATACACCCACGAGATGGCTCAGAAGTAGGCAAAACACAGAAACTACTTTGACGAATGAAGCAACAACTGATACACCGATAGCGAATAGGCTTAGAAGTCACGTTAGTACCGCTGCAGAGATAAGCGTGAATAGTCCTCGCAGTAATTCCAACGAGACCAGTGGAAAACAACAAGATCCTAACACCATACAAATCCCAACGTCCGCTTTGAACAAGCTTCTGACCATCGTGTCGAATTCGCCAAATATAGAAGTGTCTGCAAAGGAATCGAGAAACCAAAGCAACGACACGGAAGATATCAGTTTCACAGTCGAATTGTGTAAAAAGGAGAGCGACGACATTGAGACGGTACGAGCCAGAGTATTTCCAGATCAAGGCTCGTGTCTGGTAGACGAGTCTATCGTTGGTCTTCTACAAAATCAAAGTTGCGTAGAGGTGAACAGTATAATAAACACTATCCTCAGCAGCAGTCTAAAGAATGGAAGTTCGACGAAGTCAAAGGATTCGGCCGAATTCGAGCAAAAATGGCAGGCTTCTCAGAATCCGGAAGAACTATTCAAGATCGATGGAGAGGAGATTCGCGTGGACGACAATGTGGAACACATCGTGACGGATAGTCAAAATGGTTACTCGTGCAAGCTGTGTTGTAAATTCTACGAGCGTAAAGACAAATGTATGGTGCACGTGAAGACGCATCTGGGGATCAAACAGTACACGTGTATTTTATGCAACGCGAAATTCGTATGCAAGTCCGACGTGATGAAACATATACGGTGCTCGCACACCAATCCTAGACCGATACAGTGTCCAAAATGTCCAAAGAGGTTCAAATCCAAGTTTTATCTAATGGAGCACGACAACGTGCACAAAGGCGTGAGGCCGTACGCTTGCACGGATTGCGGCCAGAGTTACCATCACAAAGTATCGTTGCAGATACACATGAAATCGCATTTACCCCCGCAGAACTTGGCTTGCGAGTATTGCGGTAAAGTGTTCCCGTATCGTACGAGACTGTTGAGTCATATCGCCAGCGTTCACCTGAAAAATCGTCGGAACTTCAGGTGCCGATTTTGCTACAATCTCTATTCGAGTCTTTCGGTTTTAAACGAACACATTAAAACGCGTCACGCGACTACCTACACTTGCGAGGTGTGCACCAAAACGTTCAAAGTCGCGTCGAAATACAAGGCTCACGTGTTGCAGCACACTAACCCTAAGCCTTTCGTGTGCACCGTTTGTAACAATAGATACGCGTCGAAAGCATTCCTGAACGAGCATCTACTGAAACACGAGGGTCTGAGGAAACATATTTGCCAAAAGTGTGGCGCGAGATTTGCCCAAGCTAGTCACTTGGCCGCGCATCGGCACGTGCACGGCGAAAAGAAGCACGCTTGTCCGGAATGCGGGCGAAAATTTAATAGACGCGACAACATGAAGATAAAGGAGAACGATGGATTGCCACACGTTGTTTGCTTGCGATGCATAGGCGCGTTGGAGTTCTTGTGCGACTTTTACAGCTGTTGTCAGCTCACACAAGACAAACTCTCCGTGTCAGAGGAAGCTAGCAAATACTCGTTGGAGAATACACTTAGAAGAATACCGCAGCAGGAAAACGATGCGGAATCTAACAAGGAGAATGTTCTGCCATCTTCAAACGAAACGAAACGAAGAGGCAAAGTTGCGTCGCCCAGCAAGAAGGACCAGCCTACGAATGAAAACACATTGGACGATAGAAAACAGTCGGCTGCGAACAATGCGATTGTTGAGGAACAAAAGTTGCAGGATGAACAAAGCAACGACAACGCTTTAGCACGCGGAAATCCGTTGTCGATAAAGGATATCTCGAAGAAAGGGTCGAAATTTTTGAACAGCTGTACAGTTTCAATGAAAAAAGGCGAATCAAACGATAAAATAGCTTTAACAGAACCAAAACGACCCGTAAGAGACCGGAAACCGACCGTATCCTTGAATAGAATAAAAGAATCTCAGATAAGTTCGGATGAGACGGAACGGGATTGGAATCAACGTAAGAGACAGTGTCTGGGTACAATTTGCACGAACAGCACATCGAACGTTTCGGATGAAACGGAACGCGAAATGAATCCGCGTAAGAGACAAAGTCTGGGTACAATTTGTACGAACGGTACATCGAATGTAACCAAGAACGCTGCGATCTTGTCCACGCCGCAAATCGAGCTACCATTGGAGAATAAAGTAGCAACGATAGCGACGATACCGTCGAGAAAACGCTATATTAAAAATGATAATGCGAATAAAGATTTAATCGACGGCGTAGCGGAGGTGACTTTGAAGGACGAGTCCTTGAACGAGGAAAATAAAGAGAAGGGCTCCACAACAAGCAAAGTGATATCTGTAATCGTGAAGCAAGAGAAAGCAGACGTGGAAGTAATTTCACAAGAAATTGGAAAGCCGAACCAACTGGTTTGGATTCCAAATGAGATGCTGACAGAGGGACGAACGATCGATCCTACGATCGACCAGGATCAAGAAATTGACCTGGACTTATCGTTACGGCTGAGTCCTGAATTGGACGATGAAACGGAAAATTCTGATGTCGTCGCCACTGCTCGTACCGATTCAAACGATTCAAACGATTCAAACGATTCGGTTGATTCAGACGATTCAGAAGATTCAGAAGATTCAGAAGATTCAGACGATCCAGAAGATTCAGACTATACCGACGATCCAGACTATACCGACGATACCGAGCAGCCGAAAACAAAACTGCCGTCCGTAGAACAAACTCGCGCGACCGTTATAAGATCGTCGCGGGAAAGTCCTGTACCGGTAGTCGTTAAACTGGATGGGACCAACAATATCGACGGTACGAAAAATGATTCGAAATTCGATTTACAGTTTTCCCGGGGTAAGATTTCCGAATTGATAAGCGAGGAGCAAAAAGAAGAGATCGAGACTTATTATAGAATTGATATGTCTGCCGTTAATGCGGAAGAAGTACAAAAAAATTTGACGGTAATCGACAAGAAGAAAATTCGTTGCAACATCTGCGGAAGCCTTTATCTTCGGATGGACAAGTGCCAGGTGCATATTTGGGGCCATTTGCAGATGAAACCGTTCCAATGCAAAGCATGTGACTTTGCTACGGTAACTGTTAGCAACGTTCGTTGCCATATCAGGAAGAGTCATTTAAAGATCAAACCGTATGCGTGTAAACTTTGCGGAAAGAGCTACGCCACAAACGGGTTATTGATGCAACATATTAATGGCCACACAGGATCCCGTCCATATAAGTGTGAGATTTGCGATTTTCAATGCGCGACTCGACAAATGCTAAGCTATCACAGCAGTGTTAATCACAAACCACTCAAGGTAATCAAATGTAAAATTTGTGCCATAGAATTCTATTCTAGAAGCAAATTACGCACGCACATGCTCGTTCACAAGAAAGGTAAAGTGGTCATGTGTAAACTATGTTCCGCTTATTTATCAAACGCGAAAGCATTGGAAACACACCACAAAAACCTTCACATGCAAGACTATGTCTGTGACATATGTGGCAAACATATGAAATCGAAAAAAGCTTTGCACAATCATCAAAACGTACATTCTACGGGAAAGTACAAGTGTACTTTATGTCCAAATGTGTATAAGAGCAGTCAAATACTGAAGGAGCATCTATTGAAGCACGAAGGAATTAGGAAATACAGGTGCAGTGATTGTGGCAAGACATTCGGGCAACAGTCTCATTTGGCTGCTCACAAGGCAGTGCACAGCGAAGTTAGATTCTATTGTCCTGGATGCGAGAAATCTTTCAACCGTCACGACAACATGAAGATACACACGAAACGGTGTAAACCGTTTCTCGCAAATCCAGAACTGAAGAAACTTTTAATAAAAAAAGAAAGGACTTCGTCGACTAGCAAAGCAAACAAGTCAACCGAAGATACAATCAGTAAGGATTCTTCATCGTTGAATTTAGAAAGTTTCTTCGAGAAACAAACCGACAATGAAGAGATATCGATAAAGACTGTAAACGACAAAGAAGAGACTGCAATGAAATTAGGGTTGAATATCTCTTGCATCGATTCCCCGGATAAATCGTGGATTAGCGATAATGTGTATCAAGAGATTTGGGATCGGAAAGTTTCGAATTGCTTCTTGATGGAAGCGTGGCTAGAATCGATACAATCTCTGCACGTGCACAAATCCCATTACGACAATTGCCGAACAGTACAAACCAGTAGTATAAAGCAGGCATGTCCAGTCCTGACCAATGAACAGCTCGATAAGAAGAAAGGAAAAGAAAGGGGTCAGCTGAGTTTGGTGAAAGGTGCCATTGACCCAGATAACTCTGGATCGCGTTAG
Protein Sequence: MELGEGEAKICRLCGQYESMYIDVFSDEGTKRLLGLKIHSKINILIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQQVLRDRYNLPPLTEIAEVKTEETAPSTSTNNNNNDIDKNLNPPAKESVKEVAQRVSKTTVKTQRNLRSQHQANSHSNGITSSSSNSNNNGNGISNEAGKDQTTAESTTEDNTDNIEIVQSTGNTPTRWLRSRQNTETTLTNEATTDTPIANRLRSHVSTAAEISVNSPRSNSNETSGKQQDPNTIQIPTSALNKLLTIVSNSPNIEVSAKESRNQSNDTEDISFTVELCKKESDDIETVRARVFPDQGSCLVDESIVGLLQNQSCVEVNSIINTILSSSLKNGSSTKSKDSAEFEQKWQASQNPEELFKIDGEEIRVDDNVEHIVTDSQNGYSCKLCCKFYERKDKCMVHVKTHLGIKQYTCILCNAKFVCKSDVMKHIRCSHTNPRPIQCPKCPKRFKSKFYLMEHDNVHKGVRPYACTDCGQSYHHKVSLQIHMKSHLPPQNLACEYCGKVFPYRTRLLSHIASVHLKNRRNFRCRFCYNLYSSLSVLNEHIKTRHATTYTCEVCTKTFKVASKYKAHVLQHTNPKPFVCTVCNNRYASKAFLNEHLLKHEGLRKHICQKCGARFAQASHLAAHRHVHGEKKHACPECGRKFNRRDNMKIKENDGLPHVVCLRCIGALEFLCDFYSCCQLTQDKLSVSEEASKYSLENTLRRIPQQENDAESNKENVLPSSNETKRRGKVASPSKKDQPTNENTLDDRKQSAANNAIVEEQKLQDEQSNDNALARGNPLSIKDISKKGSKFLNSCTVSMKKGESNDKIALTEPKRPVRDRKPTVSLNRIKESQISSDETERDWNQRKRQCLGTICTNSTSNVSDETEREMNPRKRQSLGTICTNGTSNVTKNAAILSTPQIELPLENKVATIATIPSRKRYIKNDNANKDLIDGVAEVTLKDESLNEENKEKGSTTSKVISVIVKQEKADVEVISQEIGKPNQLVWIPNEMLTEGRTIDPTIDQDQEIDLDLSLRLSPELDDETENSDVVATARTDSNDSNDSNDSVDSDDSEDSEDSEDSDDPEDSDYTDDPDYTDDTEQPKTKLPSVEQTRATVIRSSRESPVPVVVKLDGTNNIDGTKNDSKFDLQFSRGKISELISEEQKEEIETYYRIDMSAVNAEEVQKNLTVIDKKKIRCNICGSLYLRMDKCQVHIWGHLQMKPFQCKACDFATVTVSNVRCHIRKSHLKIKPYACKLCGKSYATNGLLMQHINGHTGSRPYKCEICDFQCATRQMLSYHSSVNHKPLKVIKCKICAIEFYSRSKLRTHMLVHKKGKVVMCKLCSAYLSNAKALETHHKNLHMQDYVCDICGKHMKSKKALHNHQNVHSTGKYKCTLCPNVYKSSQILKEHLLKHEGIRKYRCSDCGKTFGQQSHLAAHKAVHSEVRFYCPGCEKSFNRHDNMKIHTKRCKPFLANPELKKLLIKKERTSSTSKANKSTEDTISKDSSSLNLESFFEKQTDNEEISIKTVNDKEETAMKLGLNISCIDSPDKSWISDNVYQEIWDRKVSNCFLMEAWLESIQSLHVHKSHYDNCRTVQTSSIKQACPVLTNEQLDKKKGKERGQLSLVKGAIDPDNSGSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00863429;
90% Identity: -
80% Identity: -