Lfig003400.1
Basic Information
- Insect
- Lasioglossum figueresi
- Gene Symbol
- -
- Assembly
- GCA_028455805.1
- Location
- CM052197.1:1054555-1055498[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.7e-07 0.00072 19.8 0.0 1 41 25 66 25 70 0.95 2 3 5.1 5.5e+03 -2.2 0.0 9 20 101 112 100 134 0.71 3 3 1.6 1.8e+03 -0.7 0.0 26 37 181 192 180 193 0.85
Sequence Information
- Coding Sequence
- ATGGATGTTAAAAGACGAGCCAGTTTACGTAAAAATAAAACACGAAAAGTTGATCAAATTAAAGAAGAACCAAAACAAAGTTGGAGTAATACAGATAAGCGAACACTATTAGAAGCCCTTAAAAAGTACGGAGATGAAAATATCCCTGCGATATCAGAAATGTTACCTCATATATCTCCCGAAAATATTAAATTGAAAATATCTGAATATTCAGATTTAGCAAGTGTCTCCCAAGAAAATGAGTTAGACAAATGGTTGAATTACGGTATATACAAACCTGGAGATAGTTTAATACCAGAAGCATTGTTATTTATAAGCTTATTCGAAGATCATCCATCGCCAGTGGATGCAGATGGATATGATTTCAGAGCAATCTATAACTTTCTTCATAGTTTATGTCTTGAAGAGTCACCTTCTGATCTATCAGAAAGTGATCTAAATCTACTGTGTTCCTCCTTATCAAATGTAGAAGATAGAGTATGGCCAAATCAAAAGAAAGATATATTGGCACACGCTGGAAGAGCTTATTACAAAATGAATATTAAGAAAGTATATCCAGGAAAGACCACACATTCCTTATAG
- Protein Sequence
- MDVKRRASLRKNKTRKVDQIKEEPKQSWSNTDKRTLLEALKKYGDENIPAISEMLPHISPENIKLKISEYSDLASVSQENELDKWLNYGIYKPGDSLIPEALLFISLFEDHPSPVDADGYDFRAIYNFLHSLCLEESPSDLSESDLNLLCSSLSNVEDRVWPNQKKDILAHAGRAYYKMNIKKVYPGKTTHSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00864579; iTF_00865948; iTF_00762495;
- 90% Identity
- -
- 80% Identity
- -