Basic Information

Gene Symbol
Ncor2
Assembly
GCA_028455805.1
Location
CM052192.1:13256168-13261757[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.8e-16 1.1e-12 48.1 0.5 3 45 154 196 152 197 0.95

Sequence Information

Coding Sequence
ATGTCTGTTTTTGTTGCAGAAGGTAGCAGACAGATCGGACCCCACGCGTGCACTGTCTGCCAAAACGTGGTCGAGAGTAGCGCGCAAAGCCGAGCTCTGCCAAGAAGTCAGGCAGGCCAGTACGGGCTGCGAGAGGATCAGGTGGCGCCCGGTGCTCGTGTCTGTAACACGTGTAGGTGCAAAGCGGTCAGGGGACGCTACACCTCGTGTCCTCTGCCAGGTTGCCCGAACGTGAACAACGCCAGCTCGAAGACCAGAGTGAAACGGCTAAGAGCGCTGCCCGCCAAATGGCTCGATCTACCTGCCGAGATTCGTGACCCGATTATCCAGGAGTTCCAAATACCTAGCAACGCGACCAAGTGCTGTTCAGCCTGCTTCAACCGAATATCGAGACGTCTAGCACCCCATCTAACCGGCAGCGGCGAGGTCGCCGAGAACACAGCCGATTCCATGGCCCGGCAATGGACGGACGAGGAACTTGAGCAGCTCAGGAGAGCGCTCAGAGAACACGGCACCAACTGGTTGAAGGTCGCCGAGCAAATACCCGGAAAGACCAACCATCAATGCAAGAACTACTACTTTGCGTACCGGAAGAAACAGAGCTTGGACCAAATGGTCGCCGAGTATTATCAGTCGTTGGGCGAAGAGAGGAGACCTTGCTTGACGGACGAAGAGGAGAGCGGTAGCAGTACGAGCAGCTGCGACGAGCTAGCGGTTCATGACTCGAGCGATACGGCCAGCGCGGGTAGTCCAGCGAATAATATGTCGAGCGGCACCCCAGGAACACCGGGTTCTTCTACGACTTTGCCTATGTCTTTCTCACGATCGACAGATCAGAAGCTTGGCGACAAGCTGGCTGACATTGCTGTGGTATCTTTAGTGCCACCGGTGAGCATAGGTTCGTCGCAACAGTCTTCCACCAGCGGAGGTAGCAACGCTGCTTCGGCTGGCACTAGAGAAGACTACGATAGCTCGGCCACGGAGACGGCGGACGAGGGTCAGGGAGGTGCCGATTTAGATAATAGCAGCGTCGTTGTGACATTAACTACCGCTAACAACGCGACGCCGCTTCAACAACAACAACATCAACAGCCACACCAGCAGTTGCCACCAACTTCGCATTCGCCTCCGTCGACCACCAGCAACTCGAACCCGCTCACCGTTAAAGACCTTATGCTTGGCGTTATCGAGATGCAGCTGAAACGCAACCCCAACAGCCCAGCCGGCACCGGCGGTACCTCGGTGCCGGTCAATTCCGGGACGCCAACGATATCCAGCATACTGAAGACAGATCATCGGAACGACATCACTTTCGTCAGGGAATACAAGCCGTCAAGTTCCATGGCGAACACGACCATGTCTAGGGACTCGAATTTGGCAACTCTGTCGGTGGTGTCGGGTCCTCATCACGCACATCGTTCCGCACCTAGTCCTCAACAACTTGGCCAAATGCAAGCAACAATCACCCCCTGTCCTCCAGCGGCATCGAGCAGTCAGTCCTCGTCCTCGGATCTGATTCCAAAGGAAGGGCTGATCGTGATGCAAGTTCAACAAGCGCTTCGAGAGACAGAAGGCACCCTCGACTTGAGTATTAAGAAACCAAGACAGCAACAAGATTATAATCATTCCTTGCAACCGCTTCATAAGCCACCGACGGTTGCCCTTTATCGGCCAGAACCACCTCCGGGTGCTTACTACCATCCTCATGCTCATCCGGAGCAAAGCCGCGGCGCGAAGAGTCCATTGGTTTATGCTTCTTCGCCGCGGCCTCAAGCACCTCTCACACCGAAAATGAACAAGGTCACCGTGCCACCGCCACATCCAAAATTGTCCCCTAAATTGAGCACTATAGGCACACCTGGGCACAAGAGTGGCTCCATCACGCACGGTACGCCGGTTTCCAGCGCCCGTTACGACGGTCTCCTCAGACAAATGACGCCCCCAGGAAATCCTGGCAGCGCTGCTGGCACATCGAGCGTTGCCAGTGGCGCGAGCTCAGTGAATGCTCCCAGTAATCAAGGACCTAAAGAGACGGGTTCGATAACTCAAGGCACACCGGTTCATCCGTTTGCGGTGGACAAGCGAGCGCCTATGTACGACTATCATAGAACTATCCGACATTCGCCCGTAACGACAGGCAACATTCCTGGACAGGGCCAGAGTCAAACAGGAACTGCGACGGTGGTAGTGACGCATAGCAATCAATACAATTCTTATTCCGCTCGACCGCCAAGCTATACGATGGAACAACAGTTATCCTCGCGACAGATTATCATGAACGACTATATAACCAGCCAACAAATGCACGCGCGTAGTCGGAGCGGAGCCACGTCGGAAGGAGGCAACAAGAACGAGCCGCCGTCGACGTTGTATTATACAAGCACACCTCCACCGCAGCCGCATACACAACCGCGGCAAGGTGTGATCCAGAGGCATAATCCTCAGAAACAGATGCATTATCCACCTCCGCCACCGGGACTGGAAGCTTTTTCCAGTTTAGTGGACGTCGCCGTGCAACAACCCAGTCTTCCAGTTCCCCATCCACACAGCCACCCCGCCTCTGTCAGTAGCAGTCACGAGGGTCTTGGCAAAACCATGGCGGACAGGCTGCTGGCCGACCGCTATGGAGATAAACATCGCTTGGCTATGCACCAAGCGGATCACAGAATGGCAGTGGCCCACCATCATCAACGAGATAGAGAAAGAGAACGCGATTTGGTTCATCTGCGTGAAAAGGAAGAGTACAGGTTGCAGCGAGAAAAAGAAATTCAGCAGCAGGAACACAGAATGGCTCAGCAGAGAGAAAAGGACGCGCAGCACGCCGAGCACAGGCTATCGATGCAGCAAAGAGAAAAGGATATACAACACACCGATCACCGTCTTACCGTCCATCAGCAGAGAGAGAAGGAAATCCACCAACAAATGGCTGCAGTTGCCGCTCAGCGAGAAAAGGAACACCAGGAGCATCGATTGGCCGTACAACAGCAGAGGGAAAGAGATATGCATATgcagcagcaacagcagcaacaacagcttcagcagcatatacaacaacagcagAGAATGGAAGCTGAAAGGAGGCATATAGCTCAAATGTATAGAGACCAGCAACAACAGCTCGATAGGGACGCCAGCAGGTTAATGAGCAGTGGATTCACCCAACCCTCGAGGCTCCAACAACCACAACAATCTCAACAGCAACAGCAGCAACAACAGCAGCAGCAATCGTCTCGGCAGAGTCAATCCTCGAGCCAGCAGCAGAACGAATCGGCGTCTACTTTAACGGCCGCCAGTCTGATAGATGCTATCATAACTCACCAAATTAATCAGAGCGTGGATAACACTAGCGGGAATTCGCAACCTCAACGACCAGGCGATCGTCTTTTCCAGGGATTCCATCGGGAAGCTCCCGCAGAACCAAATGGGATGGCCCATAGTCCTGCGGGTGAAGGTAATGGAGGAAACAGCGGCAACGCCAGCGGTAACGGAAGTGGAAACAAGCCGATTACTCTTGGCGAACACGTGGATCACATTGTCTCAAAGGATTACGGTCCTCCACATCCCTCCTATAGATCGTACGGCGGGTACCAAATCTCGGAAGACCAATGGAAAAGGCGAAAAGCCAACGAGTCTGATTCCGTTAAAGCTGGAGACGagcgtcagataattcgcgtgactcagcaacaatcgcagcaacagcagcaacagcaacaacaacaacaacagcagcagcagcagcagcagcagcagcaacatcagcaagcagcgtccttggtaggaaagcaacaattccactcggtcgagCCCGTGTCACCCCCGGAACCAGGTACCAATCATTACGGGCGACGTTTATATGAAACAACCACTGCCACATCGACTTCCGGAACCCCTTCCAACAAGCCTCATCTTTCGCCGCTGGATTACGTAAAGAACAAAATCGTCGAGGTAATGCGTACATCCGAAGACGATAAAGGAGGTAACGCAGGCGACAGGAACGGAGGGAACGTTGCCAGCGGAGAGAAGGACGAGAAGATAGGAGGGAACATCGAGAGTCCTTCTGGCGCAGAGATGATGGTCGACGGGTCACAAAATCAAACGCCGCAACCACCCGCGCCAGCTCCTACGACTACCTTCTATCCATTCAGTGCGTTAGGAGTGCACACTGGCCCGCCGCCAGCGCCACCACCCCCGACTTCCGGTTCCGCTTCCGTGACTAAGTCCGAACAAATGCAAGCCGAGCCGGCGCCGTTGCTTTCCGCTCAGTACGAACCACTTTCTGACGAGGATTGA
Protein Sequence
MSVFVAEGSRQIGPHACTVCQNVVESSAQSRALPRSQAGQYGLREDQVAPGARVCNTCRCKAVRGRYTSCPLPGCPNVNNASSKTRVKRLRALPAKWLDLPAEIRDPIIQEFQIPSNATKCCSACFNRISRRLAPHLTGSGEVAENTADSMARQWTDEELEQLRRALREHGTNWLKVAEQIPGKTNHQCKNYYFAYRKKQSLDQMVAEYYQSLGEERRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPANNMSSGTPGTPGSSTTLPMSFSRSTDQKLGDKLADIAVVSLVPPVSIGSSQQSSTSGGSNAASAGTREDYDSSATETADEGQGGADLDNSSVVVTLTTANNATPLQQQQHQQPHQQLPPTSHSPPSTTSNSNPLTVKDLMLGVIEMQLKRNPNSPAGTGGTSVPVNSGTPTISSILKTDHRNDITFVREYKPSSSMANTTMSRDSNLATLSVVSGPHHAHRSAPSPQQLGQMQATITPCPPAASSSQSSSSDLIPKEGLIVMQVQQALRETEGTLDLSIKKPRQQQDYNHSLQPLHKPPTVALYRPEPPPGAYYHPHAHPEQSRGAKSPLVYASSPRPQAPLTPKMNKVTVPPPHPKLSPKLSTIGTPGHKSGSITHGTPVSSARYDGLLRQMTPPGNPGSAAGTSSVASGASSVNAPSNQGPKETGSITQGTPVHPFAVDKRAPMYDYHRTIRHSPVTTGNIPGQGQSQTGTATVVVTHSNQYNSYSARPPSYTMEQQLSSRQIIMNDYITSQQMHARSRSGATSEGGNKNEPPSTLYYTSTPPPQPHTQPRQGVIQRHNPQKQMHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPHSHPASVSSSHEGLGKTMADRLLADRYGDKHRLAMHQADHRMAVAHHHQRDRERERDLVHLREKEEYRLQREKEIQQQEHRMAQQREKDAQHAEHRLSMQQREKDIQHTDHRLTVHQQREKEIHQQMAAVAAQREKEHQEHRLAVQQQRERDMHMQQQQQQQQLQQHIQQQQRMEAERRHIAQMYRDQQQQLDRDASRLMSSGFTQPSRLQQPQQSQQQQQQQQQQQSSRQSQSSSQQQNESASTLTAASLIDAIITHQINQSVDNTSGNSQPQRPGDRLFQGFHREAPAEPNGMAHSPAGEGNGGNSGNASGNGSGNKPITLGEHVDHIVSKDYGPPHPSYRSYGGYQISEDQWKRRKANESDSVKAGDERQIIRVTQQQSQQQQQQQQQQQQQQQQQQQQQHQQAASLVGKQQFHSVEPVSPPEPGTNHYGRRLYETTTATSTSGTPSNKPHLSPLDYVKNKIVEVMRTSEDDKGGNAGDRNGGNVASGEKDEKIGGNIESPSGAEMMVDGSQNQTPQPPAPAPTTTFYPFSALGVHTGPPPAPPPPTSGSASVTKSEQMQAEPAPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00306186;
90% Identity
iTF_00183215;
80% Identity
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